Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01714 and RBAM_010290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:24
# Commandline: needle
# -asequence dna-align/BSNT_01714___ecsB.1.9828.seq
# -bsequence dna-align/RBAM_010290___ecsB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01714___ecsB-RBAM_010290___ecsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01714___ecsB-RBAM_010290___ecsB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01714___ecsB
# 2: RBAM_010290___ecsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1251
# Identity: 915/1251 (73.1%)
# Similarity: 915/1251 (73.1%)
# Gaps: 48/1251 ( 3.8%)
# Score: 3180.5
#
#
#=======================================
BSNT_01714___ 1 ATGAATAATATGCTTGATATTTGGCAGTCGCGGCTGCAGGAGCATATCAA 50
||||||||||||..|...|||||||||||.|||||..|.||||||||.||
RBAM_010290__ 1 ATGAATAATATGTCTACGATTTGGCAGTCCCGGCTTGAAGAGCATATAAA 50
BSNT_01714___ 51 AGAAACAAGAACATACATGAAATATATGCTCAACGATCACCTCGTCATTG 100
.|||||.||||..||.|||||||||||||||||.|||||.||||||||||
RBAM_010290__ 51 GGAAACCAGAATGTATATGAAATATATGCTCAATGATCATCTCGTCATTG 100
BSNT_01714___ 101 TTTTGATTTTTTTTCTAGCGGGCGCTGCAAGCTGGTACAGCAAATGGATA 150
|..||||.||||||.|.||.|||||.||.||||||||||||||.|||.|.
RBAM_010290__ 101 TGCTGATCTTTTTTATTGCCGGCGCGGCGAGCTGGTACAGCAAGTGGGTC 150
BSNT_01714___ 151 CGGGACATTCCCGCTCACTTTCCGTCCTTTTGGGTGATGGCCGTGCTGTT 200
...||||||||||.|||.||||||||.||||||||||||||.|||||.||
RBAM_010290__ 151 AAAGACATTCCCGTTCATTTTCCGTCATTTTGGGTGATGGCGGTGCTCTT 200
BSNT_01714___ 201 TTCGCTCGTGTTGACAAGCTCTTATGTGCGAACGCTTTTGAAGGAGGCTG 250
|||..|.|||.||||..|.||.||.||.||.|||||..|.|||||.||.|
RBAM_010290__ 201 TTCATTTGTGCTGACCGGTTCATACGTCCGGACGCTGCTAAAGGAAGCGG 250
BSNT_01714___ 251 ACCTTGT-TTTCTTATTGCCTCTTGAAGCAAAAATGGAGCCTTACTTGAA 299
||||.|| |||| |..||||.||||||.|.|||||||.|.|.|||||.||
RBAM_010290__ 251 ACCTCGTGTTTC-TGCTGCCGCTTGAACCGAAAATGGGGACATACTTTAA 299
BSNT_01714___ 300 GCAGGCGTTTGTCTACAGCTATGTGTCTCAGCTGTTTCCGCTTATTGCGC 349
|||..|.|||...|||||||||.||||.||||||||.||||||.||||.|
RBAM_010290__ 300 GCATTCATTTAAGTACAGCTATCTGTCACAGCTGTTCCCGCTTCTTGCTC 349
BSNT_01714___ 350 TGAGCATCG-TTGCG---ATGCCGCTTTATTTCGCAGTCACACCGGGGGC 395
|| ||| |||.| |||||.||.|.||||||.||.|..||||||||
RBAM_010290__ 350 TG----TCGCTTGTGTGCATGCCTCTGTTTTTCGCTGTAAGTCCGGGGGC 395
BSNT_01714___ 396 TTCGC--TCGTATCGTATGCCGCGGTCTTTGTCCAACTGTTGCTGCTGAA 443
.|||| ||| |||||||||||.||.|||.|.||..||.||..|.|.||
RBAM_010290__ 396 GTCGCTTTCG--TCGTATGCCGCCGTATTTATTCAGATGCTGGCGGTAAA 443
BSNT_01714___ 444 GGCGTGGAATCAGGTAATGGAATGGCGCATGACTTTCCAAAACGACCGCA 493
.|||||||||||||..|||||.|||||.|||||.||....||.|||.|.|
RBAM_010290__ 444 AGCGTGGAATCAGGCCATGGAGTGGCGGATGACGTTTATGAATGACAGAA 493
BSNT_01714___ 494 GCATGAAACGGATGGACGTCATCATTCGCTTT-GCGGCGAATACACTCGT 542
||||||||..||||||.|...||||.|||||| .|.|| ||||..||..|
RBAM_010290__ 494 GCATGAAAATGATGGATGCGGTCATACGCTTTATCTGC-AATATGCTGCT 542
BSNT_01714___ 543 TCTTTATTTTGTTTTCCAATCTGTTTATATGTATGCGCTTC--TCGTCTA 590
|.|.||.||.||.||.||.||..|||||.|||| ||||.| .||||||
RBAM_010290__ 543 TTTATACTTCGTCTTACAGTCGTTTTATGTGTA--CGCTGCCGCCGTCTA 590
BSNT_01714___ 591 TGTCATT---ATGGCTGTTCTTTATCTGTATATGTCTTCCGCAGCAAAAC 637
|||| |||||.|..||||||.|||||.|..|.||.||.|||||||
RBAM_010290__ 591 ---CATTGTGATGGCCGGCCTTTATGTGTATTTCACATCGGCCGCAAAAC 637
BSNT_01714___ 638 GGAAAACATTTAAATGGGAGAG-CCATATTGAGTCCGAATTGAGACGAAA 686
..|||.||||.|||||||| || |||||||||.|..|||||.|||.|.||
RBAM_010290__ 638 ATAAATCATTAAAATGGGA-AGCCCATATTGAATATGAATTAAGAAGGAA 686
BSNT_01714___ 687 GCAGCGTTTCTATCGGATTGCCAACCTGTTTACTGATGTGCCGCATTTGC 736
.||||||||.||..|.||.|||||.||||||||.||||||||.||..||.
RBAM_010290__ 687 ACAGCGTTTTTACAGAATCGCCAATCTGTTTACCGATGTGCCTCACCTGA 736
BSNT_01714___ 737 GAAAGCAAGCCAAACGCAGAGCTTATCTCGACTTTTTGCTGCGGCTTG-T 785
.|||.||.||.||||||.|.||.||||||||||||||||| |.|..|| |
RBAM_010290__ 737 AAAAACAGGCAAAACGCCGGGCGTATCTCGACTTTTTGCT-CAGAATGAT 785
BSNT_01714___ 786 GCCGTTTGAACAGCGCAAAACATTTGCCTATATGTTCACCCGCGCCTTTT 835
.||||||||||||||.|||||.||..|||||||||...|.||.||||||.
RBAM_010290__ 786 TCCGTTTGAACAGCGGAAAACGTTCTCCTATATGTATGCGCGGGCCTTTC 835
BSNT_01714___ 836 TGCGTTCGAGCGATTATTTGGGCATTCTTGTCAGATTAACGATCGTTTTC 885
|||||||.|..||||||.|.|||||||..|||||..|.|||||..||||.
RBAM_010290__ 836 TGCGTTCAAATGATTATCTCGGCATTCAGGTCAGGCTCACGATTATTTTT 885
BSNT_01714___ 886 GCGCTGATCATTATGTATGTCTCAGCCAGCCCGCTGATTGCAGCGGTTTT 935
...|||||.||||||...||.||.||.|..|||..|||..|.||||..||
RBAM_010290__ 886 ATCCTGATTATTATGCTCGTTTCCGCTAATCCGTGGATAACGGCGGCGTT 935
BSNT_01714___ 936 GACTGTGTTTGCCATTTTCATTACGGGCATTCAGCTTCTGCCGCTCTTCG 985
.||.||.|||.||.||||.||||||||.||.||||||||||||||.||||
RBAM_010290__ 936 AACCGTTTTTACCGTTTTTATTACGGGGATACAGCTTCTGCCGCTGTTCG 985
BSNT_01714___ 986 GCCACTTTGACCATCTGGCGCTTCAAGAGCTGTACCCTGTGAAAAAAGAA 1035
|.||.|||.|.|||||..|.||.||.|||||.|||||.|| .||..||||
RBAM_010290__ 986 GGCATTTTCATCATCTTTCTCTGCAGGAGCTTTACCCGGT-CAATCAGAA 1034
BSNT_01714___ 1036 A-CAAAGCTGAAAAGCTATTTCTCTCTATTAAAAACTGCACTTAGTATTC 1084
| |.||||||.||||.|..||.||.||..|.|||.|.|||.|.|...|.|
RBAM_010290__ 1035 AGCGAAGCTGCAAAGTTTCTTTTCGCTGATGAAATCGGCATTAACCGTGC 1084
BSNT_01714___ 1085 AAGCGCTGCTGATGTCTGTTGCATCTGCCTATGCAGCCGGCTTGACCGGT 1134
|.|||||||||.|.|.||..||.||.||||||||.||.||..|.|.|||.
RBAM_010290__ 1085 AGGCGCTGCTGTTCTGTGCAGCGTCAGCCTATGCCGCGGGAGTCAGCGGG 1134
BSNT_01714___ 1135 TTTCTGTACGC-GCTGATCGGTTCTGCCGTTCTGATTTTTGTTGTTTTGC 1183
...|||||.|| |||| |.|.|||.|||||||||||||||||..|..|||
RBAM_010290__ 1135 GCGCTGTATGCGGCTG-TTGCTTCAGCCGTTCTGATTTTTGTGATCATGC 1183
BSNT_01714___ 1184 CTGCTTATATGACAACCAGGC-------TGAAAAAGCACGGAAAGCTGTG 1226
||.|.|||||| ||| ||||||||.||||.|||||||.
RBAM_010290__ 1184 CTTCGTATATG-------GGCGGAAGATTGAAAAAGTACGGCAAGCTGTA 1226
BSNT_01714___ 1227 A 1227
|
RBAM_010290__ 1227 A 1227
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