Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01714 and RBAM_010290

See Amino acid alignment / Visit BSNT_01714 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence dna-align/BSNT_01714___ecsB.1.9828.seq
#    -bsequence dna-align/RBAM_010290___ecsB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01714___ecsB-RBAM_010290___ecsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01714___ecsB-RBAM_010290___ecsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01714___ecsB
# 2: RBAM_010290___ecsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1251
# Identity:     915/1251 (73.1%)
# Similarity:   915/1251 (73.1%)
# Gaps:          48/1251 ( 3.8%)
# Score: 3180.5
# 
#
#=======================================

BSNT_01714___      1 ATGAATAATATGCTTGATATTTGGCAGTCGCGGCTGCAGGAGCATATCAA     50
                     ||||||||||||..|...|||||||||||.|||||..|.||||||||.||
RBAM_010290__      1 ATGAATAATATGTCTACGATTTGGCAGTCCCGGCTTGAAGAGCATATAAA     50

BSNT_01714___     51 AGAAACAAGAACATACATGAAATATATGCTCAACGATCACCTCGTCATTG    100
                     .|||||.||||..||.|||||||||||||||||.|||||.||||||||||
RBAM_010290__     51 GGAAACCAGAATGTATATGAAATATATGCTCAATGATCATCTCGTCATTG    100

BSNT_01714___    101 TTTTGATTTTTTTTCTAGCGGGCGCTGCAAGCTGGTACAGCAAATGGATA    150
                     |..||||.||||||.|.||.|||||.||.||||||||||||||.|||.|.
RBAM_010290__    101 TGCTGATCTTTTTTATTGCCGGCGCGGCGAGCTGGTACAGCAAGTGGGTC    150

BSNT_01714___    151 CGGGACATTCCCGCTCACTTTCCGTCCTTTTGGGTGATGGCCGTGCTGTT    200
                     ...||||||||||.|||.||||||||.||||||||||||||.|||||.||
RBAM_010290__    151 AAAGACATTCCCGTTCATTTTCCGTCATTTTGGGTGATGGCGGTGCTCTT    200

BSNT_01714___    201 TTCGCTCGTGTTGACAAGCTCTTATGTGCGAACGCTTTTGAAGGAGGCTG    250
                     |||..|.|||.||||..|.||.||.||.||.|||||..|.|||||.||.|
RBAM_010290__    201 TTCATTTGTGCTGACCGGTTCATACGTCCGGACGCTGCTAAAGGAAGCGG    250

BSNT_01714___    251 ACCTTGT-TTTCTTATTGCCTCTTGAAGCAAAAATGGAGCCTTACTTGAA    299
                     ||||.|| |||| |..||||.||||||.|.|||||||.|.|.|||||.||
RBAM_010290__    251 ACCTCGTGTTTC-TGCTGCCGCTTGAACCGAAAATGGGGACATACTTTAA    299

BSNT_01714___    300 GCAGGCGTTTGTCTACAGCTATGTGTCTCAGCTGTTTCCGCTTATTGCGC    349
                     |||..|.|||...|||||||||.||||.||||||||.||||||.||||.|
RBAM_010290__    300 GCATTCATTTAAGTACAGCTATCTGTCACAGCTGTTCCCGCTTCTTGCTC    349

BSNT_01714___    350 TGAGCATCG-TTGCG---ATGCCGCTTTATTTCGCAGTCACACCGGGGGC    395
                     ||    ||| |||.|   |||||.||.|.||||||.||.|..||||||||
RBAM_010290__    350 TG----TCGCTTGTGTGCATGCCTCTGTTTTTCGCTGTAAGTCCGGGGGC    395

BSNT_01714___    396 TTCGC--TCGTATCGTATGCCGCGGTCTTTGTCCAACTGTTGCTGCTGAA    443
                     .||||  |||  |||||||||||.||.|||.|.||..||.||..|.|.||
RBAM_010290__    396 GTCGCTTTCG--TCGTATGCCGCCGTATTTATTCAGATGCTGGCGGTAAA    443

BSNT_01714___    444 GGCGTGGAATCAGGTAATGGAATGGCGCATGACTTTCCAAAACGACCGCA    493
                     .|||||||||||||..|||||.|||||.|||||.||....||.|||.|.|
RBAM_010290__    444 AGCGTGGAATCAGGCCATGGAGTGGCGGATGACGTTTATGAATGACAGAA    493

BSNT_01714___    494 GCATGAAACGGATGGACGTCATCATTCGCTTT-GCGGCGAATACACTCGT    542
                     ||||||||..||||||.|...||||.|||||| .|.|| ||||..||..|
RBAM_010290__    494 GCATGAAAATGATGGATGCGGTCATACGCTTTATCTGC-AATATGCTGCT    542

BSNT_01714___    543 TCTTTATTTTGTTTTCCAATCTGTTTATATGTATGCGCTTC--TCGTCTA    590
                     |.|.||.||.||.||.||.||..|||||.||||  ||||.|  .||||||
RBAM_010290__    543 TTTATACTTCGTCTTACAGTCGTTTTATGTGTA--CGCTGCCGCCGTCTA    590

BSNT_01714___    591 TGTCATT---ATGGCTGTTCTTTATCTGTATATGTCTTCCGCAGCAAAAC    637
                        ||||   |||||.|..||||||.|||||.|..|.||.||.|||||||
RBAM_010290__    591 ---CATTGTGATGGCCGGCCTTTATGTGTATTTCACATCGGCCGCAAAAC    637

BSNT_01714___    638 GGAAAACATTTAAATGGGAGAG-CCATATTGAGTCCGAATTGAGACGAAA    686
                     ..|||.||||.|||||||| || |||||||||.|..|||||.|||.|.||
RBAM_010290__    638 ATAAATCATTAAAATGGGA-AGCCCATATTGAATATGAATTAAGAAGGAA    686

BSNT_01714___    687 GCAGCGTTTCTATCGGATTGCCAACCTGTTTACTGATGTGCCGCATTTGC    736
                     .||||||||.||..|.||.|||||.||||||||.||||||||.||..||.
RBAM_010290__    687 ACAGCGTTTTTACAGAATCGCCAATCTGTTTACCGATGTGCCTCACCTGA    736

BSNT_01714___    737 GAAAGCAAGCCAAACGCAGAGCTTATCTCGACTTTTTGCTGCGGCTTG-T    785
                     .|||.||.||.||||||.|.||.||||||||||||||||| |.|..|| |
RBAM_010290__    737 AAAAACAGGCAAAACGCCGGGCGTATCTCGACTTTTTGCT-CAGAATGAT    785

BSNT_01714___    786 GCCGTTTGAACAGCGCAAAACATTTGCCTATATGTTCACCCGCGCCTTTT    835
                     .||||||||||||||.|||||.||..|||||||||...|.||.||||||.
RBAM_010290__    786 TCCGTTTGAACAGCGGAAAACGTTCTCCTATATGTATGCGCGGGCCTTTC    835

BSNT_01714___    836 TGCGTTCGAGCGATTATTTGGGCATTCTTGTCAGATTAACGATCGTTTTC    885
                     |||||||.|..||||||.|.|||||||..|||||..|.|||||..||||.
RBAM_010290__    836 TGCGTTCAAATGATTATCTCGGCATTCAGGTCAGGCTCACGATTATTTTT    885

BSNT_01714___    886 GCGCTGATCATTATGTATGTCTCAGCCAGCCCGCTGATTGCAGCGGTTTT    935
                     ...|||||.||||||...||.||.||.|..|||..|||..|.||||..||
RBAM_010290__    886 ATCCTGATTATTATGCTCGTTTCCGCTAATCCGTGGATAACGGCGGCGTT    935

BSNT_01714___    936 GACTGTGTTTGCCATTTTCATTACGGGCATTCAGCTTCTGCCGCTCTTCG    985
                     .||.||.|||.||.||||.||||||||.||.||||||||||||||.||||
RBAM_010290__    936 AACCGTTTTTACCGTTTTTATTACGGGGATACAGCTTCTGCCGCTGTTCG    985

BSNT_01714___    986 GCCACTTTGACCATCTGGCGCTTCAAGAGCTGTACCCTGTGAAAAAAGAA   1035
                     |.||.|||.|.|||||..|.||.||.|||||.|||||.|| .||..||||
RBAM_010290__    986 GGCATTTTCATCATCTTTCTCTGCAGGAGCTTTACCCGGT-CAATCAGAA   1034

BSNT_01714___   1036 A-CAAAGCTGAAAAGCTATTTCTCTCTATTAAAAACTGCACTTAGTATTC   1084
                     | |.||||||.||||.|..||.||.||..|.|||.|.|||.|.|...|.|
RBAM_010290__   1035 AGCGAAGCTGCAAAGTTTCTTTTCGCTGATGAAATCGGCATTAACCGTGC   1084

BSNT_01714___   1085 AAGCGCTGCTGATGTCTGTTGCATCTGCCTATGCAGCCGGCTTGACCGGT   1134
                     |.|||||||||.|.|.||..||.||.||||||||.||.||..|.|.|||.
RBAM_010290__   1085 AGGCGCTGCTGTTCTGTGCAGCGTCAGCCTATGCCGCGGGAGTCAGCGGG   1134

BSNT_01714___   1135 TTTCTGTACGC-GCTGATCGGTTCTGCCGTTCTGATTTTTGTTGTTTTGC   1183
                     ...|||||.|| |||| |.|.|||.|||||||||||||||||..|..|||
RBAM_010290__   1135 GCGCTGTATGCGGCTG-TTGCTTCAGCCGTTCTGATTTTTGTGATCATGC   1183

BSNT_01714___   1184 CTGCTTATATGACAACCAGGC-------TGAAAAAGCACGGAAAGCTGTG   1226
                     ||.|.||||||       |||       ||||||||.||||.|||||||.
RBAM_010290__   1184 CTTCGTATATG-------GGCGGAAGATTGAAAAAGTACGGCAAGCTGTA   1226

BSNT_01714___   1227 A   1227
                     |
RBAM_010290__   1227 A   1227


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