Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01710 and RBAM_010270
See
Amino acid alignment /
Visit
BSNT_01710 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:24
# Commandline: needle
# -asequence dna-align/BSNT_01710___hit.1.9828.seq
# -bsequence dna-align/RBAM_010270___hit.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01710___hit-RBAM_010270___hit.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01710___hit-RBAM_010270___hit.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01710___hit
# 2: RBAM_010270___hit
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity: 334/438 (76.3%)
# Similarity: 334/438 (76.3%)
# Gaps: 0/438 ( 0.0%)
# Score: 1254.0
#
#
#=======================================
BSNT_01710___ 1 ATGCATTGTGCAGAAAATTGTATCTTTTGTAAAATTATCGCCGGCGACAT 50
|||||....||.||..|||||||.||.||.|||||.||.|||||.|||||
RBAM_010270__ 1 ATGCACAAAGCGGACGATTGTATTTTCTGCAAAATCATTGCCGGTGACAT 50
BSNT_01710___ 51 TCCATCCGCGAAGGTGTATGAAGATGAACATGTACTTGCCTTTCTTGATA 100
|||.||..|.||.||.||.|||.|||||||.||..|.||.||||||||||
RBAM_010270__ 51 TCCGTCTTCAAAAGTATACGAAAATGAACACGTCGTGGCGTTTCTTGATA 100
BSNT_01710___ 101 TCAGCCAAGTGACAAAAGGCCATACGCTTGTCATTCCGAAAACACATATT 150
|||||||.||.|||||||||||||||||.||.|||||||||||||||||.
RBAM_010270__ 101 TCAGCCAGGTCACAAAAGGCCATACGCTCGTGATTCCGAAAACACATATC 150
BSNT_01710___ 151 GAGAATGTATATGAATTTACAGATGAATTAGCAAAACAATATTTCCATGC 200
||.||.||.||.||.|||||...|||..|..|.|||.|||||||..|.||
RBAM_010270__ 151 GAAAACGTGTACGAGTTTACGCCTGAGCTTTCTAAAGAATATTTTGAAGC 200
BSNT_01710___ 201 TGTTCCGAAAATCGCCCGCGCTATCCGGGATGAATTTGAACCGATCGGCT 250
.||.|||||||||||.|||||.|||||.||||||||.||.||||||||..
RBAM_010270__ 201 GGTGCCGAAAATCGCACGCGCCATCCGCGATGAATTCGAGCCGATCGGGC 250
BSNT_01710___ 251 TAAATACGCTGAACAATAACGGCGAAAAAGCTGGACAATCTGTGTTCCAC 300
|.||||..||.||.||.|||||.||||||||.||.|||||.||||||||.
RBAM_010270__ 251 TGAATATTCTCAATAACAACGGTGAAAAAGCGGGCCAATCGGTGTTCCAT 300
BSNT_01710___ 301 TACCATATGCATATTATCCCTCGCTACGGAAAAGGAGATGGATTCGGAGC 350
|..||.||||||||.||.||.||.|||||||||||.||.||.|||||.||
RBAM_010270__ 301 TTTCACATGCATATCATTCCGCGTTACGGAAAAGGCGACGGTTTCGGGGC 350
BSNT_01710___ 351 GGTTTGGAAAACGCATGCTGATGATTATAAACCGGAGGATCTGCAGAACA 400
.||.|||||.||.||.||.||.||.||||..||.||.|||||.|||.|.|
RBAM_010270__ 351 TGTCTGGAAGACCCACGCCGAAGACTATACGCCTGACGATCTTCAGGAGA 400
BSNT_01710___ 401 TCTCTTCCTCTATCGCAAAACGCCTGGCCTCATCATAA 438
||.||||..|..||..||||||.||.||||||||.|||
RBAM_010270__ 401 TCGCTTCAACCGTCAGAAAACGGCTTGCCTCATCTTAA 438
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.