Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01709 and RBAM_010260
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:24
# Commandline: needle
# -asequence dna-align/BSNT_01709___serC.1.9828.seq
# -bsequence dna-align/RBAM_010260___serC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01709___serC-RBAM_010260___serC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01709___serC-RBAM_010260___serC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01709___serC
# 2: RBAM_010260___serC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1094
# Identity: 844/1094 (77.1%)
# Similarity: 844/1094 (77.1%)
# Gaps: 28/1094 ( 2.6%)
# Score: 3185.0
#
#
#=======================================
BSNT_01709___ 1 ATGGAACGTACAACGAATTTTAACGCAGGTCCTGCAGCGCTGCCACTGGA 50
||||||||||||||||||||.||.|||||.||.|||||.||.||||||||
RBAM_010260__ 1 ATGGAACGTACAACGAATTTCAATGCAGGACCCGCAGCCCTTCCACTGGA 50
BSNT_01709___ 51 AGTTCTGCAAAAAGCACAGAAAGAATTTATTGATTTTAACGAATCCGGCA 100
.||.||||||||||||||.|||||||||.|..|.||.||.||..||||||
RBAM_010260__ 51 TGTGCTGCAAAAAGCACAAAAAGAATTTGTCAACTTCAATGATACCGGCA 100
BSNT_01709___ 101 TGTCTGTTATGGAGCTTTCCCACCGCAGCAAAGAGTATGAAGCGGTGCAC 150
||||.||.||||||||.||||||||.||||..||.|||||.|||||||||
RBAM_010260__ 101 TGTCCGTCATGGAGCTGTCCCACCGAAGCACGGAATATGATGCGGTGCAC 150
BSNT_01709___ 151 CAAAAAGCGAAAAGCC-TCTTAATCGAACTGATGGGCATTCCGGAAGATT 199
||||||||.||||||| |||.|| .||||||||||..|||||.||.||||
RBAM_010260__ 151 CAAAAAGCCAAAAGCCTTCTGAA-AGAACTGATGGATATTCCCGACGATT 199
BSNT_01709___ 200 ACGATATCTTGTTTCTTCAAGGCGGGGCAAGCCTTCAATTCTCAATGCTT 249
|||||||.||.||||||||||||||.|||||||||||||||||.|||||.
RBAM_010260__ 200 ACGATATTTTATTTCTTCAAGGCGGCGCAAGCCTTCAATTCTCCATGCTG 249
BSNT_01709___ 250 CCGATGAACTTTTTAACACCTGAAAAAACCGCACATTTTGTGATGACAGG 299
|||||||||||||||||.||.||..||||.||.||.||..|..|.||.||
RBAM_010260__ 250 CCGATGAACTTTTTAACGCCGGAGCAAACGGCGCACTTCATCGTAACGGG 299
BSNT_01709___ 300 CGCTTGGTCTGAAAAAGCACTGGCAGAAACGAAATTGTTCGGGAACACGT 349
|||.|||||||||||||||||.||.||..|||||.|||||||.|||||.|
RBAM_010260__ 300 CGCATGGTCTGAAAAAGCACTCGCCGAGGCGAAACTGTTCGGAAACACAT 349
BSNT_01709___ 350 CTATCACCGCTACTAGTGAAACAGA---CAATTACAGCTATATTCCAGAG 396
|..||||.||.||.||.| |||| .||..|||.|.|.||.||.||.
RBAM_010260__ 350 CCGTCACGGCAACAAGCG---CAGATTCAAACCACAACCACATACCGGAA 396
BSNT_01709___ 397 GTTGACCT-TACGGATGTAAAAGACGGCGCATATTTACATATCACATCCA 445
|..||||| |..||| .|.|||||||||||.||..|.|||||.||.||.|
RBAM_010260__ 397 GCGGACCTCTCAGGA-ATCAAAGACGGCGCCTACCTGCATATTACGTCAA 445
BSNT_01709___ 446 ACAATACAATTTTCGGCACTCAGTGGCAGGAGTTTCCGAATTCTCCTATT 495
||||.||.||||||||.||.||||||.|.|||||.||||||||..|.||.
RBAM_010260__ 446 ACAACACGATTTTCGGAACGCAGTGGAAAGAGTTCCCGAATTCAACAATC 495
BSNT_01709___ 496 CCGCTCGTAGCCGACATGTCCAGCGATATTTTAAGCAGAAAAATCGATGT 545
||||||||||||||||||||.|||||.||..|.|||||||||||.|||||
RBAM_010260__ 496 CCGCTCGTAGCCGACATGTCAAGCGACATCCTGAGCAGAAAAATTGATGT 545
BSNT_01709___ 546 GTCCAAA---TTTGATGTGATCTACGGAGGCGCCCAAAAGAACCTCGGCC 592
|||| ||||||||.|||||.||.||.|||||.||.||||||||.|
RBAM_010260__ 546 ---CAAAACGTTTGATGTCATCTATGGCGGAGCCCAGAAAAACCTCGGGC 592
BSNT_01709___ 593 CTTCCGGCGTGACTGTAGTCATTATGAAAAAAAGCTGGCTGAAAAATGAA 642
|.||||||||.||.||.|||||.|||||||||...|||||..||||.|||
RBAM_010260__ 593 CGTCCGGCGTCACGGTCGTCATCATGAAAAAATCATGGCTTGAAAACGAA 642
BSNT_01709___ 643 AATGCGAACGTCCCAAAAATCCTGAAATATTC----CACACATGTCAAAG 688
||.||.||||||||.|||||..|||||||.|| |||||| ||||
RBAM_010260__ 643 AACGCCAACGTCCCTAAAATGTTGAAATACTCCACTCACACA----AAAG 688
BSNT_01709___ 689 CGGATTCACTCTACAACACTCCGCCGACATTTGCGATTTATATGCTGAGC 738
|.||||||||.||.||.||.|||||.||||||||||||||||||||||||
RBAM_010260__ 689 CCGATTCACTGTATAATACGCCGCCTACATTTGCGATTTATATGCTGAGC 738
BSNT_01709___ 739 CTCGTTCTGGAATGGCTCAAGGAAAACGGCGGTGTGGAAGCTGTTGAACA 788
|||||.||.||||||||....||||||||||||||.|||||.|.|||||.
RBAM_010260__ 739 CTCGTCCTTGAATGGCTGGCTGAAAACGGCGGTGTCGAAGCGGCTGAACG 788
BSNT_01709___ 789 GCGCAATGAACAAAAAGCGCAGGTTCTCTACAGCTGTATTGATGAAAGCA 838
|||||||.|..||||.||..|.||.||.|||.||...||.||.|.||||.
RBAM_010260__ 789 GCGCAATCAGGAAAAGGCCGATGTCCTGTACGGCACAATCGACGCAAGCG 838
BSNT_01709___ 839 ACGGCTTCTATAAAGGTCATGCCAGAAAGGACAGCCGCTCACGCATGAAT 888
.|||.||.||....||.||||||..|||.||||||||.||.|.||||||.
RBAM_010260__ 839 GCGGGTTTTACGCGGGGCATGCCGCAAAAGACAGCCGTTCTCACATGAAC 888
BSNT_01709___ 889 GTCACCTTCACGCTTCGGGATGACGAAT-TAACGAAAACATTCGTCCAGA 937
|||||.|||||.||.||.|| .|..|.| |.|||||||.||||||..|..
RBAM_010260__ 889 GTCACGTTCACCCTCCGCGA-CAGCAGTCTCACGAAAAAATTCGTTGAAG 937
BSNT_01709___ 938 AAGCAAAAGATGCGAAGATGATCGGCCTTGGCGGACACCGTTCGGTGGGA 987
||||.||||..||.||.||||.|||.||.||.||.|||||.||.||.|||
RBAM_010260__ 938 AAGCGAAAGCGGCTAAAATGACCGGACTCGGAGGCCACCGCTCAGTCGGA 987
BSNT_01709___ 988 GGCTGCCGCGCTTCTATTTATAACGCGGTCTCTCTCGAAGACTGTGAAAA 1037
||||||.|.||.|||||.||.|||||.|||...||.|..||.||||||||
RBAM_010260__ 988 GGCTGCAGGGCGTCTATCTACAACGCCGTCAGCCTGGCTGATTGTGAAAA 1037
BSNT_01709___ 1038 ATTAGCTGCGTTCATGAAGAAA-TTCCAGCAGGAAAATGAGTAA 1080
|.|.|||..|||.||| ||||| ||||||||||||||.||.|||
RBAM_010260__ 1038 ACTGGCTCAGTTTATG-AGAAAGTTCCAGCAGGAAAACGAATAA 1080
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