Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01708 and RBAM_010250

See Amino acid alignment / Visit BSNT_01708 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence dna-align/BSNT_01708___yhaG.1.9828.seq
#    -bsequence dna-align/RBAM_010250___yhaG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01708___yhaG-RBAM_010250___yhaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01708___yhaG-RBAM_010250___yhaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01708___yhaG
# 2: RBAM_010250___yhaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 530
# Identity:     393/530 (74.2%)
# Similarity:   393/530 (74.2%)
# Gaps:          22/530 ( 4.2%)
# Score: 1408.5
# 
#
#=======================================

BSNT_01708___      1 ATGAAAACAAAAGAGTTAGTCATTATGGCTCTGTTTGCCGCAATCGGCGC     50
                     ||||||||||||||.||||||||||||||.||||||||.||||||||.||
RBAM_010250__      1 ATGAAAACAAAAGAATTAGTCATTATGGCCCTGTTTGCGGCAATCGGAGC     50

BSNT_01708___     51 AGCGCTTCATTCCATTATTCCGCCCTTTTTAGGCGGCATGAAACCAGATA    100
                     .|.|||||||||||||||.|||||..|.|||..|||.||||||||.||||
RBAM_010250__     51 GGTGCTTCATTCCATTATGCCGCCGGTATTATTCGGAATGAAACCCGATA    100

BSNT_01708___    101 TGATGCTGATCATGATGTTCATGGGCATTCTGCTGTTCCCGCGGGTGCAA    150
                     |||||||..|.||||||||.|||||.||||||.|.|||||.||.|||||.
RBAM_010250__    101 TGATGCTTGTGATGATGTTTATGGGTATTCTGTTATTCCCCCGTGTGCAG    150

BSNT_01708___    151 AATGTACTCGTCATCGGGATCGTGACCGGAATCATTTCCGCGCTTACAAC    200
                     ||.||.||..|.||.|||||.||.||.||||||||||||||.||.||.||
RBAM_010250__    151 AACGTGCTGATGATTGGGATTGTAACGGGAATCATTTCCGCACTCACGAC    200

BSNT_01708___    201 CGCGTTTCCAGCCGGACAGATCCCCAACATCATTGATAAACCCGTATCAG    250
                     ..|.|||||.|.|||||||.|.||.||.||||||||.|||||.|||.|.|
RBAM_010250__    201 ATCTTTTCCGGGCGGACAGCTTCCGAATATCATTGAAAAACCGGTAACGG    250

BSNT_01708___    251 CGTTTCTGTTCTTCTCCCTGTTTCTCTTGTTCAGAAAGAGCCGAAAAACA    300
                     ||||||||||..||.|.|||...||.|||.|.|.|||||||...||||||
RBAM_010250__    251 CGTTTCTGTTTCTCGCGCTGGCGCTTTTGGTGAAAAAGAGCGTGAAAACA    300

BSNT_01708___    301 GGTGCAGCCGCTGTGCTGACAGTGAT---CGGGACCATCTTATCAGGAAT    347
                     |..||.|||||.||..|.||   |||   |||.|||.||.|.||.|| .|
RBAM_010250__    301 GCGGCCGCCGCCGTCATTAC---GATAGCCGGCACCTTCATCTCCGG-TT    346

BSNT_01708___    348 TG-TGTTTCTATCGTCAGCTTTATTGATCGTCGGTTTACCGGGCGGTTTC    396
                     || |.|||.|..||...||..|..||||.|||||..|.||||||||.|||
RBAM_010250__    347 TGCTCTTTTTGGCGCTGGCCCTTCTGATTGTCGGCCTGCCGGGCGGATTC    396

BSNT_01708___    397 GCCGCAT---TGTTCGCGGCTGTTGTTCTGCCGGCCGCTGTGCTGAATAC    443
                     .||||||   ||.|||||   ||.||.||.|||||.||||.|||||||||
RBAM_010250__    397 ACCGCATTGGTGCTCGCG---GTCGTCCTTCCGGCGGCTGCGCTGAATAC    443

BSNT_01708___    444 AATCTCAATGATCATTATTTATCCGATTGTGCAAACCATTTTAAGGC-GT    492
                     .|||.|.||.||||||||..|||||||||||||.||.||.||||..| ||
RBAM_010250__    444 GATCGCCATTATCATTATGCATCCGATTGTGCAGACGATCTTAAAACGGT    493

BSNT_01708___    493 TCAAGCTTTATG---GAAGCTGCTAAATAA    519
                     .|||    ||||   |||.|.|..||||||
RBAM_010250__    494 CCAA----TATGATTGAAACGGTGAAATAA    519


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