Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01695 and RBAM_010180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01695___yhaL.1.9828.seq
# -bsequence dna-align/RBAM_010180___yhaL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01695___yhaL-RBAM_010180___yhaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01695___yhaL-RBAM_010180___yhaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01695___yhaL
# 2: RBAM_010180___yhaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 168/231 (72.7%)
# Similarity: 168/231 (72.7%)
# Gaps: 21/231 ( 9.1%)
# Score: 604.5
#
#
#=======================================
BSNT_01695___ 1 GTGTTATTTTTTCCATGGTGGGTGTATCTTTGTATTGTAGGCATCATTTT 50
|||.||||||||||.||||||||.||.|||||.|||.|.||.||.|||||
RBAM_010180__ 1 GTGCTATTTTTTCCTTGGTGGGTATACCTTTGCATTATCGGAATTATTTT 50
BSNT_01695___ 51 CAGCGCATATAAACTTGTGGCGGCAGCCAAAGAGGAAGAAAAAGTAGACC 100
||||||.|||||.|||.|..|..||||.|||||.||.|||||..|.||||
RBAM_010180__ 51 CAGCGCTTATAAGCTTTTCACAACAGCTAAAGAAGAGGAAAAGCTTGACC 100
BSNT_01695___ 101 AGGCTTTTATTGAAAAAGAAGGACAGATTTATATGGAGAGGATGGAAAAG 150
||.|.||||||||||||||||||..|.|.|||||.||..||||||||.||
RBAM_010180__ 101 AGTCGTTTATTGAAAAAGAAGGAAGGGTGTATATTGAACGGATGGAACAG 150
BSNT_01695___ 151 GAGCGAGAACGCCGCAGTTCTCAG---CAGCA--TGAA------------ 183
||.||.||.|||||.| |..|.| |.||| ||||
RBAM_010180__ 151 GAACGCGAGCGCCGTA--TGGCGGCGCCCGCAAGTGAAAACGGGGACGCG 198
BSNT_01695___ 184 GAAGAAAA-TCAAAACCATTCCATCGCATAA 213
|||||||| || .||.|||||||||||||||
RBAM_010180__ 199 GAAGAAAACTC-CAATCATTCCATCGCATAA 228
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