Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01694 and RBAM_010170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01694___yhaM.1.9828.seq
# -bsequence dna-align/RBAM_010170___yhaM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01694___yhaM-RBAM_010170___yhaM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01694___yhaM-RBAM_010170___yhaM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01694___yhaM
# 2: RBAM_010170___yhaM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 945
# Identity: 739/945 (78.2%)
# Similarity: 739/945 (78.2%)
# Gaps: 54/945 ( 5.7%)
# Score: 3087.0
#
#
#=======================================
BSNT_01694___ 0 -------------------------------------------------- 0
RBAM_010170__ 1 ATGGCAAAAGGTATTATGCTGCACGAGGTCGGCGAGCAGGTCGATCAATA 50
BSNT_01694___ 1 ----TTGATTAAATCCTCGACGAAAGGGATTGCAAGCAATGGAAAACCGT 46
.||||||||||.|||||.||.||.||.||||||||.||||||||.|
RBAM_010170__ 51 CTTTCTGATTAAATCTTCGACTAAGGGAATCGCAAGCAACGGAAAACCAT 100
BSNT_01694___ 47 TTCTGACGCTGATGCTGCAAGACCAGTCAGGCGATATTGAAGCGAAGCTG 96
|.||||||.|.||||||||.|||||.||.||.|||||.||||||||||||
RBAM_010170__ 101 TCCTGACGTTAATGCTGCAGGACCAATCGGGAGATATCGAAGCGAAGCTG 150
BSNT_01694___ 97 TGGGATGCCAAGCAAAGTGATGAAGTGACCTATGCGCCGCAGACGATTGT 146
|||||||||||||..|.|||||||...||.||.|||.||||||||||.||
RBAM_010170__ 151 TGGGATGCCAAGCCGACTGATGAAACAACATACGCGGCGCAGACGATCGT 200
BSNT_01694___ 147 CAAGGTCGTCGGCGATGTTCATCATTATCGCGGGCGCACCCAGCTGAAGC 196
.|||||..||||.|||||.|||||.||||||||.||.|.||||||.||||
RBAM_010170__ 201 GAAGGTGATCGGAGATGTCCATCACTATCGCGGACGAAACCAGCTTAAGC 250
BSNT_01694___ 197 TAAGAAATATCAGACCGGTAAGCGAGCAAGAAAACGTCAATATAGATGAT 246
|.|||||.|||.|.||||...|||||.|.|||||.||||..||.||||||
RBAM_010170__ 251 TGAGAAACATCCGGCCGGCCGGCGAGAACGAAAATGTCAGCATTGATGAT 300
BSNT_01694___ 247 TTTTTAGAAACCGCGCCGATTCCGAAAAATGAAATGATGGATACCATCAC 296
|||.|.|||||.|||||||||||||||||.|||||||||||.|||.||||
RBAM_010170__ 301 TTTCTGGAAACGGCGCCGATTCCGAAAAACGAAATGATGGAAACCGTCAC 350
BSNT_01694___ 297 TCAATATATATTTGAAATGAAAAATCCGAATATCCAGCGAATCACAAGGT 346
||||||.||.|||||||||||||||||.||.||||||||.||||||||..
RBAM_010170__ 351 TCAATACATTTTTGAAATGAAAAATCCAAACATCCAGCGGATCACAAGAC 400
BSNT_01694___ 347 TTTTGGTTAAAAAACACGAAGCTGAGTTTATGGATTATCCGGCGGCTACG 396
.|.||||.||||||.|.|..|||||||||||||||||.||||||||..|.
RBAM_010170__ 401 ATCTGGTCAAAAAATATGCGGCTGAGTTTATGGATTACCCGGCGGCGGCT 450
BSNT_01694___ 397 AAAAACCACCATGAGTTTGTCTCAGGTTTGGCGTATCATGTTGTCTCTAT 446
|||||||||||||||||.|||||.||..|.|||||||||||.||.||.||
RBAM_010170__ 451 AAAAACCACCATGAGTTCGTCTCCGGGCTCGCGTATCATGTAGTGTCCAT 500
BSNT_01694___ 447 GCTGAACCTGGCGAAAGCAATAGCAGATTTATATCCTTCTCTTGATCGTG 496
||||||||||||.|||||.||.||.|||.|.|||||.||||||||.||.|
RBAM_010170__ 501 GCTGAACCTGGCAAAAGCGATTGCCGATCTGTATCCGTCTCTTGACCGGG 550
BSNT_01694___ 497 ATCTGCTTTACGCCGGTGTTATCCTGCATGATCTTGGAAAAGTGAAGGAG 546
||.|.||.||.|||||.||.||.||||||||.||.||.|||||.||.|||
RBAM_010170__ 551 ATTTACTGTATGCCGGAGTCATTCTGCATGACCTCGGCAAAGTAAAAGAG 600
BSNT_01694___ 547 CTGTCCGGCCCTGTTTCCACTTCATATACGGTTGAAGGCAATTTGCTCGG 596
||.||.||||||||||||||..|.||.||.||.|||||.|||.|||||||
RBAM_010170__ 601 CTTTCAGGCCCTGTTTCCACCACGTACACTGTGGAAGGGAATCTGCTCGG 650
BSNT_01694___ 597 CCATATTTCCATCATGGTGACAGAGCTTTCAAAAGCGGCTGAGGAGCTTC 646
.||.|||||.||||||||||||||||||||||||||.||.||.|||||||
RBAM_010170__ 651 ACACATTTCAATCATGGTGACAGAGCTTTCAAAAGCAGCCGAAGAGCTTC 700
BSNT_01694___ 647 AAATCGATTCTGAAGAGGTGTTAATTCTTCAGCATTTGATTTTGAGTCAC 696
|.||.||..|||||||.|||.|.|||||..|||||||||||||.||.||.
RBAM_010170__ 701 AGATTGACGCTGAAGAAGTGCTGATTCTGAAGCATTTGATTTTAAGCCAT 750
BSNT_01694___ 697 CACGGCAAAGCAGAATGGGGCAGCCCAAAACCGCCGATGGTGAAAGAAGC 746
|||||.|||||.||||||||.|||||.|||||||||||||||||||||||
RBAM_010170__ 751 CACGGAAAAGCGGAATGGGGAAGCCCGAAACCGCCGATGGTGAAAGAAGC 800
BSNT_01694___ 747 GGAAATTCTTCACTATATAGACAATCTGGATGCAAAAATGAATATGATGG 796
|||||||||.|||||.||.||||||||||||||||||||||..|||||||
RBAM_010170__ 801 GGAAATTCTGCACTACATTGACAATCTGGATGCAAAAATGATCATGATGG 850
BSNT_01694___ 797 ACAGAGCGCTTGAACGCGTGAAGCCGGGCGAGTATACTGAACGTGTATTT 846
||||||||||||||||.||||||||||||||.||.||.||.|||||||||
RBAM_010170__ 851 ACAGAGCGCTTGAACGGGTGAAGCCGGGCGAATACACAGAGCGTGTATTT 900
BSNT_01694___ 847 GCACTGGAAAACCGTTCCTTTTATAAACCGACATTTCATAAATAA 891
||.||.|||||||||||.||.||.||||||||.||.|||.|||||
RBAM_010170__ 901 GCGCTTGAAAACCGTTCTTTCTACAAACCGACTTTCCATCAATAA 945
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