Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01682 and RBAM_010070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence dna-align/BSNT_01682___hemZ.1.9828.seq
# -bsequence dna-align/RBAM_010070___hemZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01682___hemZ-RBAM_010070___hemZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01682___hemZ-RBAM_010070___hemZ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01682___hemZ
# 2: RBAM_010070___hemZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1529
# Identity: 1211/1529 (79.2%)
# Similarity: 1211/1529 (79.2%)
# Gaps: 49/1529 ( 3.2%)
# Score: 4804.0
#
#
#=======================================
BSNT_01682___ 1 TTGCAAATTAAAATAGAAGGCATACA-TGATGACCGCCTGCATCGGCCTC 49
||||||||.||||||||.||||| || .||||||.|.||||||||.||.|
RBAM_010070__ 1 TTGCAAATAAAAATAGACGGCAT-CACGGATGACAGGCTGCATCGTCCGC 49
BSNT_01682___ 50 TGCAAAATATTGCAAATTTGTTTTATGAAGAGTGCGAGCTTGCGTATGGC 99
|||||||.||.||.|||||.||||.|||||||||.|..||||||||.|||
RBAM_010070__ 50 TGCAAAACATCGCGAATTTATTTTTTGAAGAGTGTGTTCTTGCGTACGGC 99
BSNT_01682___ 100 GGA---GAGGAGCCCGCAGATTTTGTCATTTCTTTAGCGTTGTCACAAAC 146
|.| |||||.|||.|.|||.|.|||||.||..|.||..|.||.|||
RBAM_010070__ 100 GAAACGGAGGAACCCTCTGATCTCGTCATCTCACTTGCCATTTCTCAA-- 147
BSNT_01682___ 147 GGATG-----AGCATGTGACGGTTTCGGGAGAAGTGAAGGGAACTGGCAT 191
|||| ||| |||.||||.||.||||||.|.||.|||||.|||..
RBAM_010070__ 148 -GATGCAGACAGC--GTGTCGGTATCCGGAGAAATCAAAGGAACCGGCGA 194
BSNT_01682___ 192 AAAGGAACAGCATACAAAA----TTCTTTTCTCCCGGCAT-GAATGAAAA 236
|||||||||.|||||.||| |||| |.|||| || ||..|||||
RBAM_010070__ 195 AAAGGAACATCATACGAAACCGCTTCT----TGCCGG-ATGGAGCGAAAA 239
BSNT_01682___ 237 AGAAGCTTTTAAGCAAGTGAAAAACACAATTTCTTATGTGTATCTCAATC 286
|||||..|||||.||.|||||||||||..|.||.||.||.||..|.||||
RBAM_010070__ 240 AGAAGTATTTAAACAGGTGAAAAACACGCTGTCGTACGTCTACTTAAATC 289
BSNT_01682___ 287 TTCTTCAGGCGCATACGGGCATTACGCAGAAGTGGGGAATCCTCACAGGA 336
|||||||..|||||||||||||.||.||.||.|||||||||.|.||.||.
RBAM_010070__ 290 TTCTTCAATCGCATACGGGCATGACACAAAAATGGGGAATCTTAACCGGC 339
BSNT_01682___ 337 ATCCGGCCCACAAAGCTGCTTCATAAAAAACTGCAAAGCGGAATGTCCAA 386
|||.||||.||.||.||.|||||||||||.|||||.|||||..||.|.||
RBAM_010070__ 340 ATCAGGCCTACTAAACTTCTTCATAAAAAGCTGCAGAGCGGCCTGACAAA 389
BSNT_01682___ 387 GGAGCAAGCGCATGCTGAGTTGAAAAAAGACTATTTAATTCATGATGAAA 436
.||..|.|||||.||.||..||||||||||.|||.|.||.||||||||||
RBAM_010070__ 390 AGAAGAGGCGCACGCCGATCTGAAAAAAGATTATCTGATCCATGATGAAA 439
BSNT_01682___ 437 AAATCATGCTAATGCAGGAAATTGTTGACCGTCAGCTGGCGGCAGTTCCG 486
||||||..||.||||||||.|||||.|||||||||||.||.||.|||||.
RBAM_010070__ 440 AAATCAATCTGATGCAGGAGATTGTCGACCGTCAGCTCGCTGCGGTTCCC 489
BSNT_01682___ 487 GATTTGTACCGAGTAAAGGATGAAGTCAGCATTTATATCGGCATTCCGTT 536
|||.|||||||.||.||.||||||||||||||.|||||||||||.|||||
RBAM_010070__ 490 GATCTGTACCGGGTCAAAGATGAAGTCAGCATATATATCGGCATCCCGTT 539
BSNT_01682___ 537 CTGCCCGACAAAATGCGCGTATTGCACATTCCCTGCGTACGCTATCCAAG 586
||||||||||||||||||.||.|||||.||.||.||.||.||.||.||||
RBAM_010070__ 540 CTGCCCGACAAAATGCGCCTACTGCACGTTTCCGGCTTATGCCATTCAAG 589
BSNT_01682___ 587 GACAGGCGGGCAGAGTCGGCTCATTCCTATGGGGACTGCATTACGAAATG 636
||||||||||.|||||||||||.||..|||||||.||.||.||.||||||
RBAM_010070__ 590 GACAGGCGGGAAGAGTCGGCTCCTTTTTATGGGGGCTTCACTATGAAATG 639
BSNT_01682___ 637 CAGAAGATTGGTGAATGGCTGAAGGAGCATGATGTTAAGGTTACAACCAT 686
|||||.||.||.||||||||||||..|||||||.|.||.||.||.|||||
RBAM_010070__ 640 CAGAAAATCGGAGAATGGCTGAAGCGGCATGATATCAAAGTGACGACCAT 689
BSNT_01682___ 687 TTACTTTGGCGGCGGGACGCCGACAAGCATTACAGCGGAGGAGATGGATC 736
|||.||.||||||||.|||||||||||||||||.||.|||||.|||||||
RBAM_010070__ 690 TTATTTCGGCGGCGGCACGCCGACAAGCATTACCGCTGAGGAAATGGATC 739
BSNT_01682___ 737 TGCTGTATGAAGAAATGGTCCGCTCCTTCCCGGATGT---GAAAAACATT 783
|..|.||||||||||||||||||||.||||||||||| |||.|.||
RBAM_010070__ 740 TTTTATATGAAGAAATGGTCCGCTCTTTCCCGGATGTCGCGAATATCA-- 787
BSNT_01682___ 784 CGTGAGATTACGGTGGAGGCCGGTCGTCCTGACACGATTACAGAAGAAAA 833
|.||||||||.||.||.||.||.|||||.|||||||||||.||.|||||
RBAM_010070__ 788 -GGGAGATTACCGTTGAAGCGGGCCGTCCCGACACGATTACGGAGGAAAA 836
BSNT_01682___ 834 ACTCGCCGTTTTAAACAAATATGACATTGATCGGATCAGCATCAATCCGC 883
.||.|||||.|||||.||.|||.|.|||||..|.|||||||||||.||||
RBAM_010070__ 837 GCTGGCCGTATTAAATAAGTATAAGATTGACAGAATCAGCATCAACCCGC 886
BSNT_01682___ 884 AATCCTACGAAAACGAAACGCTAAAGGCGATCGGGCGGCACCATACGGTT 933
||||.||.||||||||||||||.|||||.|||||..|.||.|||||.|||
RBAM_010070__ 887 AATCTTATGAAAACGAAACGCTTAAGGCCATCGGCAGACATCATACAGTT 936
BSNT_01682___ 934 GAAGAGACCATTGAGAAATATCATCTGTCACGCCAGCACGGCATGAATAA 983
|||||.|||||.||.|||||.|||||.||.|||.|.||||||||||||||
RBAM_010070__ 937 GAAGAAACCATCGAAAAATACCATCTTTCCCGCAAACACGGCATGAATAA 986
BSNT_01682___ 984 TATTAACATGGACTTGATTATTGGTTTGCCTGGGGAAGGTGTGAAG---G 1030
.||.|||||||||.||||.||.||..||||.||.||||| ||.| |
RBAM_010070__ 987 CATCAACATGGACCTGATCATCGGCCTGCCGGGAGAAGG---GACGGCTG 1033
BSNT_01682___ 1031 AGTTTAGGCACAGTCTTTCAGAAACAGAAAAACTGATGCCGGAATCCCTT 1080
||||.||||||||||||...|||||.|||||.||||||||.|||||..|.
RBAM_010070__ 1034 AGTTCAGGCACAGTCTTGAGGAAACGGAAAAGCTGATGCCTGAATCTTTG 1083
BSNT_01682___ 1081 ACCGTTCATACTCTTTCATTTAAACGGGCGTCAGAAATGACGAGAAACAA 1130
|||||||||||.|||||.||||||||||||||||||||||||||||||||
RBAM_010070__ 1084 ACCGTTCATACGCTTTCTTTTAAACGGGCGTCAGAAATGACGAGAAACAA 1133
BSNT_01682___ 1131 GCATAAGTACAAAGTTGCCGGCAGGGAAGAGGTTTCTCAAATGATGGAAG 1180
|||||||||.||||||||||.|||..|.||.||.||.|..||||||||.|
RBAM_010070__ 1134 GCATAAGTATAAAGTTGCCGACAGACAGGAAGTGTCCCGCATGATGGATG 1183
BSNT_01682___ 1181 ACGCGGTAGCCTGGACGAAAGAGCATGGGTACGTGCCTTATTATTTATAC 1230
||||.||...||||||.||||||||.||.||...|||.||.||.||.|||
RBAM_010070__ 1184 ACGCCGTCCGCTGGACAAAAGAGCACGGCTATACGCCGTACTACTTGTAC 1233
BSNT_01682___ 1231 CGCCAGAAAAACATTCTTGGAAACCTTGAAAACGTCGGATACTCTTTGCC 1280
||.||||||||||||||.||||||||||||||.|||||.|||||.||.||
RBAM_010070__ 1234 CGGCAGAAAAACATTCTCGGAAACCTTGAAAATGTCGGCTACTCCTTCCC 1283
BSNT_01682___ 1281 GGGACAAGAAAGCATCTACAACATTATGATTATGGAAGAGGTGCAGACGA 1330
.||.||.||||||||||||||||||||||||||||||||.||||||||||
RBAM_010070__ 1284 TGGTCAGGAAAGCATCTACAACATTATGATTATGGAAGAAGTGCAGACGA 1333
BSNT_01682___ 1331 TTATTGGCATCGGCTGCGGCGCTGCTAGTAAATTTATTGATCGGGATACA 1380
||||.||.||||||||||||||.||.||.|||||.|||.|||.|||.||.
RBAM_010070__ 1334 TTATCGGTATCGGCTGCGGCGCGGCAAGCAAATTCATTCATCCGGAAACC 1383
BSNT_01682___ 1381 GGGAAAATCACGCATTTTGCGAATCCGAAAGATCCGAAATCGTACAATGA 1430
||.|||||||||||.||.||.||||||||||||||||||||.||.|||||
RBAM_010070__ 1384 GGAAAAATCACGCACTTCGCCAATCCGAAAGATCCGAAATCATATAATGA 1433
BSNT_01682___ 1431 GCGCTTCGAGCACTACACGGACGAAAAAATCAAATATTTAGAGCAGATTT 1480
.||.||||||||.||.||.||.||.|||||||||||.|||||..||||.|
RBAM_010070__ 1434 CCGATTCGAGCATTATACAGAAGAGAAAATCAAATACTTAGATGAGATGT 1483
BSNT_01682___ 1481 TTGAGAAGACGACAAAGCAGCACTGA--- 1506
| ||.||||.|.||| |.|
RBAM_010070__ 1484 T--------CGTCAAATCTGCA-TTATAA 1503
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