Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01675 and RBAM_010010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence dna-align/BSNT_01675___yheC.1.9828.seq
# -bsequence dna-align/RBAM_010010___yheC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01675___yheC-RBAM_010010___yheC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01675___yheC-RBAM_010010___yheC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01675___yheC
# 2: RBAM_010010___yheC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1117
# Identity: 811/1117 (72.6%)
# Similarity: 811/1117 (72.6%)
# Gaps: 50/1117 ( 4.5%)
# Score: 2778.0
#
#
#=======================================
BSNT_01675___ 1 ATGATAACACTCGGTTTTATGTCCTTATCCCGCCAGCATGAAGCGGATTA 50
||||.||||||||||||||||||..|||||||||.|||.||||..|||||
RBAM_010010__ 1 ATGACAACACTCGGTTTTATGTCTGTATCCCGCCGGCACGAAGAAGATTA 50
BSNT_01675___ 51 TTCCGCAGAACTGGCCAAAAGAGCACCCGAATTCGGCATA-----CGTTT 95
..|||..|||.||||..|||||||.||..||| ||| ||.||
RBAM_010010__ 51 CGCCGGGGAATTGGCTGAAAGAGCGCCTCAAT-----ATAATGTGCGCTT 95
BSNT_01675___ 96 CATCCGGTTTACACCATTTGATATTTTACCTGACACTTTGCGTGTCAAAG 145
...|||.||||||||.||||||||.||.||.||..|||||||.||.||||
RBAM_010010__ 96 AGCCCGCTTTACACCGTTTGATATATTTCCGGATTCTTTGCGCGTGAAAG 145
BSNT_01675___ 146 C-ATCGGTCTATCATTCGGCCAGCAGCACATGGAACGAAACTGAAATGGC 194
| .|| ||||||||..||...|||.|.|..|||||||||||.|||||.|.
RBAM_010010__ 146 CGCTC-GTCTATCACCCGCAAAGCGGAAAGTGGAACGAAACGGAAATCGA 194
BSNT_01675___ 195 GATTCCAGATTATATTTATGATCGCTGTTTTTACGGCAAGGATTCAC--A 242
.|||||.||.||||||||.||.||||||||||||||.|| ||.|.| |
RBAM_010010__ 195 TATTCCCGAATATATTTACGACCGCTGTTTTTACGGAAA--ATCCGCTGA 242
BSNT_01675___ 243 TTCCCAAAAAGCAAAACCAATCGTTGAGTGGCTCAAAAAATATCCGAAAA 292
..|.||||||||.|||||.|||||.||.|||||.||||||||||.|||||
RBAM_010010__ 243 AGCGCAAAAAGCCAAACCGATCGTCGAATGGCTGAAAAAATATCGGAAAA 292
BSNT_01675___ 293 CGGAATTTATCGGGCGGGGTCTTCCCGATAAGTGGACCGTCCTTCAC-GA 341
|||||||||||||.|||||.|||||.|||||.|||||.| |||| ||
RBAM_010010__ 293 CGGAATTTATCGGCCGGGGGCTTCCTGATAAATGGACGG----TCACGGA 338
BSNT_01675___ 342 TTTGC------AGCAGCACTCTGTAATCAATCCCTATATTCCGGAAACGA 385
|..|| ||||.|| |||| ||||.||||||||||||.||||||.
RBAM_010010__ 339 TGCGCTCCAAAAGCATCA-TCTG--ATCAGTCCCTATATTCCTGAAACGG 385
BSNT_01675___ 386 TAAAGGTGAGCCGCTACGAACAAATTCACTCCTTTTTATCCAAAGAAAAA 435
...|.||.||||||||.|||||..|.||.||.|..|||.||||.||||||
RBAM_010010__ 386 CCGAAGTCAGCCGCTATGAACAGGTGCAATCATACTTAGCCAAGGAAAAA 435
BSNT_01675___ 436 GCCTGCATCCTTAAACCGGCATTCGGCGCGGGAGGCAGAGGCGTGATTCT 485
||.||.||.|||||.||.||.|||||.|||||||||||||||.|.||.||
RBAM_010010__ 436 GCATGTATACTTAAGCCCGCTTTCGGAGCGGGAGGCAGAGGCATCATCCT 485
BSNT_01675___ 486 -ATTGAAGCTGGGCAAGAAAAAC-ATCACAGCTACTTATCACATCGGAAA 533
.|||||.| .||||| ||||.| ||.||.||.|||||..|.||||||||
RBAM_010010__ 486 GCTTGAAAC-AGGCAA-AAAATCAATTACGGCCACTTACTATATCGGAAA 533
BSNT_01675___ 534 GGATAAGCAGACAAAAACGTTTTCCAACCAGACTTCTTTTAAAACATGGT 583
..|.||.||.||||||.|.||||||||.||....||||||||..|.||||
RBAM_010010__ 534 AAACAAACAAACAAAATCATTTTCCAATCACGTGTCTTTTAAGTCTTGGT 583
BSNT_01675___ 584 GCAAAAAAGTGCTTCAGCATCAATATTTGCTTCAGCCTTACTTAAACATT 633
|||||||||||||.|||||.|..|||||||||||..|.||||||||.||.
RBAM_010010__ 584 GCAAAAAAGTGCTGCAGCACCGCTATTTGCTTCAATCCTACTTAAATATC 633
BSNT_01675___ 634 CAAGATAAGGAACAATACCCTTGTGATATTCGTCTGTTTATG-GAAAAAA 682
||.|||||.||.|...|.||.||.||.||.||..|.||.||| | .|||
RBAM_010010__ 634 CAGGATAAAGAGCGGCATCCGTGCGACATCCGCATTTTCATGCG--CAAA 681
BSNT_01675___ 683 ACGAAG-CAGGTGAATGGAATACAGTCGGAAAGGCAGTAAGACGCGGATA 731
|||.|| ||||.|..|||.|.||.||||||||.||.||.|||.|.||.||
RBAM_010010__ 682 ACGGAGTCAGGCGTTTGGGAAACGGTCGGAAAAGCGGTCAGAAGGGGTTA 731
BSNT_01675___ 732 -CAAACACGGGCTGCTGGCCAATTTGTCAGGCGGATCTGATGCGCTGACA 780
||.| ||||.||..|..|..|||||.|.||.|||||.||..||.|.|..
RBAM_010010__ 732 TCAGA-ACGGTCTTTTATCTCATTTGCCCGGAGGATCCGAACCGATTAAG 780
BSNT_01675___ 781 TTTGACTCCTGGTTTGAAGATATACCGAAAAAACAGCAAGTGGTTTTACT 830
||||||.|.||||||||.||.||.||||.|||.|||||.|..||||||.|
RBAM_010010__ 781 TTTGACACATGGTTTGAGGAAATTCCGAGAAAGCAGCAGGCCGTTTTATT 830
BSNT_01675___ 831 AGATGATGTGTTTTCGATTACCCAATCGGTTCCGTATTATCTTGACGAGC 880
.||||||||.||||||||.||||||||.||.||.||||..|||||.||.|
RBAM_010010__ 831 GGATGATGTCTTTTCGATCACCCAATCCGTCCCTTATTTCCTTGATGAAC 880
BSNT_01675___ 881 GCTATGGACCGTTGTTTGAACTCGGTCTTGATATATGTCTTGCTAAGGAC 930
|.|..||.|||.|||||||.||.||.||.|||||.|||..|||.||.|||
RBAM_010010__ 881 GGTTCGGGCCGCTGTTTGAGCTGGGGCTCGATATTTGTTATGCCAAAGAC 930
BSNT_01675___ 931 GGGAGAATTTGGATTTTAGATATCAATTCAAAACCGGGCAGGAAGTCAAT 980
||..|.||.|||.||||.|||.||||.|||||.|||||..||||..|.||
RBAM_010010__ 931 GGACGCATCTGGCTTTTGGATGTCAACTCAAAGCCGGGACGGAAAGCTAT 980
BSNT_01675___ 981 CCT--GCGTGTCTCTCCCGAGCAAAAAGAACAGCTGTACACTTGTCCCCT 1028
..| ||||| .||||.|||...|||||..|..||||.||..||||.||
RBAM_010010__ 981 TTTAAGCGTG--GCTCCGGAGGCGAAAGAGGATTTGTATACGAGTCCGCT 1028
BSNT_01675___ 1029 AAAGCGCT---GCCAATATCTGTTTTCTGAGCAAAGCCAGAAAGGAGTTC 1075
.|..|||| ||.||..||.| ||..||.||||||.|||||||||..
RBAM_010010__ 1029 GAGACGCTTCCGCGAACTTCAG---TCACAGGAAAGCCGGAAAGGAGTAT 1075
BSNT_01675___ 1076 TTCCGCGTGAATCCTAA 1092
|.|||||||||||.|||
RBAM_010010__ 1076 TACCGCGTGAATCATAA 1092
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