Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01640 and RBAM_009770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:18
# Commandline: needle
# -asequence dna-align/BSNT_01640___yhdO.1.9828.seq
# -bsequence dna-align/RBAM_009770___yhdO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01640___yhdO-RBAM_009770___yhdO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01640___yhdO-RBAM_009770___yhdO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01640___yhdO
# 2: RBAM_009770___yhdO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 608
# Identity: 463/608 (76.2%)
# Similarity: 463/608 (76.2%)
# Gaps: 16/608 ( 2.6%)
# Score: 1734.0
#
#
#=======================================
BSNT_01640___ 1 ATGTATAAGTTTTGTGCAAATGCTTTAAAAGTTATTCTTTCTCTTCGCGG 50
|||||||||||||||||||||||..|.|||...|||||.||.||.|||||
RBAM_009770__ 1 ATGTATAAGTTTTGTGCAAATGCCATCAAATGCATTCTATCCCTGCGCGG 50
BSNT_01640___ 51 AGGAGTGAAGGTGTATAACAAAGAAAACCTTCCGGCCGATTCAGGTTTTG 100
|||||||||.|||||.||.|||||.||.||||||.|.|||..|||.||.|
RBAM_009770__ 51 AGGAGTGAAAGTGTACAATAAAGAGAATCTTCCGTCTGATAAAGGATTCG 100
BSNT_01640___ 101 TCATCGCGTGTACACATTCCGGCTGGGTTGATGTGATTACACTCGGAGTC 150
|.||||||||.||.|||.|.||||||||.||.||..|.||.|||||.|||
RBAM_009770__ 101 TTATCGCGTGCACGCATGCGGGCTGGGTGGACGTCCTCACGCTCGGTGTC 150
BSNT_01640___ 151 GGGATTCTTCCTTATCAAATACACTACATGGCGAAAAAAGAGCTTTTTCA 200
|||||..|.||..||||.||.||.||.|||||||||||||||||.|||||
RBAM_009770__ 151 GGGATATTGCCCCATCAGATTCATTATATGGCGAAAAAAGAGCTGTTTCA 200
BSNT_01640___ 201 AAATAAATGGATCGGTTCG-TTTCTGAAGAAAATTCATGCTTTTCCGGTA 249
.||.||.|||||||| .|| |||.|||||||.|||||.||.||.|||||.
RBAM_009770__ 201 GAAAAAGTGGATCGG-ACGTTTTTTGAAGAAGATTCACGCGTTCCCGGTT 249
BSNT_01640___ 250 GATCGGGAAAATCCCGGGCCAAGCAGTATTAAAACGCCGATTAAGCTGCT 299
||.||.||||||||.||.||||||||.||||||||||||||||||||.||
RBAM_009770__ 250 GACCGTGAAAATCCGGGCCCAAGCAGCATTAAAACGCCGATTAAGCTTCT 299
BSNT_01640___ 300 GAAAGAAGGAGAGATCGTCGGTATCTTCCCAAGCGGAACAAGAACCTCTG 349
|||.||||||.||||.|||||.||.||.||.|||||.||.|||||.||.|
RBAM_009770__ 300 GAAGGAAGGAAAGATTGTCGGGATTTTTCCGAGCGGTACGAGAACATCAG 349
BSNT_01640___ 350 AGGATGTGCCTTTGAAAAGAGGTGCGGTGACGATTGCGCAAATGGGGAAA 399
|.||.||.||..||||||||||.||.|||||.||.||.||||||||.|||
RBAM_009770__ 350 AAGACGTCCCGCTGAAAAGAGGGGCCGTGACCATCGCCCAAATGGGAAAA 399
BSNT_01640___ 400 GCGCCGCTTGTCCCCGCTGCATATCAGGGCCCTTCAAGCGGAAAAGAATT 449
||||||||.||.||.||.||||||.|.||.||.||.|..|||||||...|
RBAM_009770__ 400 GCGCCGCTCGTTCCGGCCGCATATAAAGGGCCGTCTACGGGAAAAGCGCT 449
BSNT_01640___ 450 ATTCAAAAAAGGAAAAATGAAGCTGATTATCGGTGAGCC-----TCTTCA 494
.||.|||||.|||||||||..|||.||.|||||.||||| |.||
RBAM_009770__ 450 GTTTAAAAAGGGAAAAATGCGGCTTATCATCGGCGAGCCGATTTTTTT-- 497
BSNT_01640___ 495 CCAGGCTGATTTTGCCCACCTGCCTTCAAAGGAAAGACTTGCAGCAATGA 544
||..||.|||.||.|.||..|..|.|||||.||.|||||.||.||||
RBAM_009770__ 498 ---GGAGGACTTTTCCGATCTTGCGCCGAAGGAGAGGCTTGCGGCCATGA 544
BSNT_01640___ 545 CAGAGGCTTTGAATCAGC--GGATTAAAGAACTAGAGAATAAACTTGATC 592
||||.|...||||| || |.||||||||.||.|||||.||||||||.|
RBAM_009770__ 545 CAGAAGAGCTGAAT--GCCAGAATTAAAGAGCTTGAGAAAAAACTTGAAC 592
BSNT_01640___ 593 AGCTATAA 600
|.||.|||
RBAM_009770__ 593 AACTGTAA 600
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