Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01603 and RBAM_009570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence dna-align/BSNT_01603___yhxB.1.9828.seq
# -bsequence dna-align/RBAM_009570___yhxB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01603___yhxB-RBAM_009570___yhxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01603___yhxB-RBAM_009570___yhxB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01603___yhxB
# 2: RBAM_009570___yhxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1774
# Identity: 1368/1774 (77.1%)
# Similarity: 1368/1774 (77.1%)
# Gaps: 59/1774 ( 3.3%)
# Score: 5232.5
#
#
#=======================================
BSNT_01603___ 1 ATGACTTGGAGAAAGAGCTATGAACGCTGGAAACAGACAGAACATTTAGA 50
||||.||||||.|||||.||.|||||||||||.|||.|.|||||.|||||
RBAM_009570__ 1 ATGAGTTGGAGTAAGAGTTACGAACGCTGGAATCAGGCCGAACAATTAGA 50
BSNT_01603___ 51 TCCGGAATT-AAAAGAGCGCCTTATT----GAATTAGAGGGAGATGAACA 95
|.|.||||| ||||.| ||||| ||...|||.|||.|.||.||
RBAM_009570__ 51 TTCAGAATTGAAAAAA-----TTATTGGCGGACGCAGAAGGAAACGAGCA 95
BSNT_01603___ 96 GGCCCTTGAGGACTGTTTCTATAAAGACCTTGAATTCGGTACCGGCGGAA 145
|...||.||.||.|.||||||.|||.|.|||||.|||||.||.||.||.|
RBAM_009570__ 96 GCTGCTGGAAGATTTTTTCTACAAAAATCTTGAGTTCGGAACAGGAGGCA 145
BSNT_01603___ 146 TGCGCGGAGAAATCGGCGCCGGG-ACAAATCGGATGAATATTTACACTGT 194
||.|.||||||||||| |||||| ||.||..||||||||||||||||.||
RBAM_009570__ 146 TGAGAGGAGAAATCGG-GCCGGGTACGAACAGGATGAATATTTACACGGT 194
BSNT_01603___ 195 GCGCAAAGCATCGGCCGGGTTTGCGGCATACATCTCGAAGCAAGGTGAGG 244
.|||||||||||.|||||..|||||||.||.|||.||||.||.||.||.|
RBAM_009570__ 195 CCGCAAAGCATCCGCCGGACTTGCGGCGTATATCGCGAAACAGGGGGAAG 244
BSNT_01603___ 245 AAGCGAAAAAACGGGGCGTTGTCATTGCTTATGATTCCCGCCATAAATCT 294
|.|||||||||.|.||.||||..||.||.||.||.|||||.|||||||||
RBAM_009570__ 245 ACGCGAAAAAAAGAGGGGTTGCGATCGCATACGACTCCCGTCATAAATCT 294
BSNT_01603___ 295 CCGGAGTTCGCGATGGAAGCGGCAAAAACACTTGCGACACAAGGCATCCA 344
||.|||||.|||||||||||.||||||||.|||||..|.||||||||.||
RBAM_009570__ 295 CCTGAGTTTGCGATGGAAGCTGCAAAAACCCTTGCTTCCCAAGGCATTCA 344
BSNT_01603___ 345 AACATACGTGTTTGATGAGCTTCGCCCGACGCCAGAGCTGTCATTCGCTG 394
|||||||||.|||||||||||.|||||||||||.||||||||.||.||.|
RBAM_009570__ 345 AACATACGTATTTGATGAGCTCCGCCCGACGCCTGAGCTGTCTTTTGCGG 394
BSNT_01603___ 395 TCAGACAGCTGAACGCTTATGGAGGGATTGTGGTAACGGCAAGCCATAAC 444
|.|||.|||||||||||||||..||.||.||.||.|||||.|||||||||
RBAM_009570__ 395 TGAGAAAGCTGAACGCTTATGCCGGTATCGTCGTGACGGCCAGCCATAAC 444
BSNT_01603___ 445 CCGCCTGAATATAACGGCTACAAAGTATACGGGGATGATGGCGGCCAGCT 494
|||||||||||||||||.||.|||||.||.||.|||||.||||..|||||
RBAM_009570__ 445 CCGCCTGAATATAACGGATATAAAGTGTATGGCGATGACGGCGCACAGCT 494
BSNT_01603___ 495 GCCTCCAAAGGAAGCGGACATCGTCATTGAGCAGGTAAACGCGATTGAAA 544
|||.||.||.|||||||||||||||||||.|.|.||.||.||.||.||||
RBAM_009570__ 495 GCCGCCGAAAGAAGCGGACATCGTCATTGCGGAAGTGAATGCCATAGAAA 544
BSNT_01603___ 545 ATGAGCTGACGA-TCACAGTGGACGAAGAAAATAAGTTAAAAGAAAAAGG 593
||||..|.|||| ||| |||.||.||.|||.|...|.|.|||||||||||
RBAM_009570__ 545 ATGAATTAACGATTCA-AGTTGAAGATGAACAGTCGCTGAAAGAAAAAGG 593
BSNT_01603___ 594 CTTAATTAAAATCATCGGTGAAGATATTGATAAAGTTTATACAGAAAAAC 643
.||.||||||||.|||||||||||.|||||||||...|||||.|||.|||
RBAM_009570__ 594 TTTGATTAAAATAATCGGTGAAGAAATTGATAAACCGTATACTGAAGAAC 643
BSNT_01603___ 644 TGACGTCCATTTCTGTACATCCTGAATTATCGGAAGAAGTAGATGTAAAG 693
||||.|||||.||.||||||||.||..|.||||..|||||.|||||.|..
RBAM_009570__ 644 TGACTTCCATCTCCGTACATCCCGAGCTTTCGGCTGAAGTGGATGTCAGC 693
BSNT_01603___ 694 GTTGTTTTCACACCGCTGCATGGAACTGCAAATAAACCGGTCAGACGCGG 743
||.||.|||||.||||||||.||.||.||||||||||||||..|.|||||
RBAM_009570__ 694 GTCGTGTTCACTCCGCTGCACGGCACGGCAAATAAACCGGTGCGCCGCGG 743
BSNT_01603___ 744 TCTTGAAGCACTCGGCTACAAAAATGTAACGGTTGTCAAAGAACAGGAAC 793
|||||||||||||||.||||||||.||.||.||.||.||.||.||.||.|
RBAM_009570__ 744 TCTTGAAGCACTCGGTTACAAAAACGTCACCGTCGTAAAGGAGCAAGAGC 793
BSNT_01603___ 794 TGCCGGATTCAAACTTCTCCACTGTTACATCGCCAAACCCGGAAGAGCAT 843
|||||||..|..|.||.||.||.||.|.||||||.||.|||||||||||.
RBAM_009570__ 794 TGCCGGACCCGGATTTTTCAACCGTCAAATCGCCGAATCCGGAAGAGCAC 843
BSNT_01603___ 844 GCGGCATTCGAATATGCCATTAAGCTTGGGGAGGAGCAGAATGCAGATAT 893
|||||||||||||||||||||||.||.||.||.||.||.||.||.|||||
RBAM_009570__ 844 GCGGCATTCGAATATGCCATTAAACTCGGAGAAGAACAAAACGCTGATAT 893
BSNT_01603___ 894 TCTCATCGCGACAGATCCTGATGCTGACCGCCTCGGCATCGCGGTGAAAA 943
||||.||||.||.||.||.|||||.|||||.||||||||.||.||.||||
RBAM_009570__ 894 TCTCGTCGCTACGGACCCGGATGCCGACCGTCTCGGCATTGCCGTAAAAA 943
BSNT_01603___ 944 ACGATC-AAGGCAAATATACAGTGCTGACAGGAAACCAAACCGGAGCGCT 992
|| |.| |||||||.||.|||||||||||.||||||||.||.||.|||||
RBAM_009570__ 944 AC-AGCGAAGGCAAGTACACAGTGCTGACGGGAAACCAGACAGGCGCGCT 992
BSNT_01603___ 993 GCTGCTTCATTACCTGCTTTCTGAAAAGAAAAAACAAGGCATCCTGCCTG 1042
..|..|.||||||||||||||.||.|||||||||||.|||..|||.||||
RBAM_009570__ 993 TTTATTGCATTACCTGCTTTCCGAGAAGAAAAAACAGGGCGCCCTTCCTG 1042
BSNT_01603___ 1043 ATAACGGTGTTGTTCTCAAAACGATCGTCACAAGTGAAATCGGCCGTGCT 1092
|.||||||||.||..|.||||||||.|||||.||.|||.|.|||||.||.
RBAM_009570__ 1043 AAAACGGTGTCGTCATGAAAACGATTGTCACGAGCGAATTGGGCCGCGCC 1092
BSNT_01603___ 1093 GTAGCTTCTTCATTCGGCCTTGATACGATTGATACGCTGACAGGCTTTAA 1142
||.|||||.||.|||||..|.||||||.||||.||||||||||||||.||
RBAM_009570__ 1093 GTCGCTTCATCGTTCGGATTAGATACGGTTGACACGCTGACAGGCTTCAA 1142
BSNT_01603___ 1143 GTTTATCGGTGAAAAGATTAAGGAATACGAGGCATCAGGCCAGTATACCT 1192
.||||||||||||||.||.||.|||||.||...|||||||||.||.||.|
RBAM_009570__ 1143 ATTTATCGGTGAAAAAATCAAAGAATATGAAAAATCAGGCCAATACACGT 1192
BSNT_01603___ 1193 TCCAATTCGGTTATGAAGAGAGCTACGGTTATTTAATCGGGGATTTTGCC 1242
||||.|||||.||||||||.||||||||.||.||||||||.|||||.||.
RBAM_009570__ 1193 TCCAGTTCGGGTATGAAGAAAGCTACGGCTACTTAATCGGCGATTTCGCG 1242
BSNT_01603___ 1243 CGCGATAAGGACGCCATTCAGGCTGCGCTTTTGGCAGTTGAAGTTTGCGC 1292
||.||.||.|||||.||.|||||||||||.||.||.||.||.||.|||||
RBAM_009570__ 1243 CGTGACAAAGACGCGATACAGGCTGCGCTGTTAGCCGTCGAGGTATGCGC 1292
BSNT_01603___ 1293 GTTCTATAAAAAACAGGGAATGTCTTTGTATGAGGCGCTCAT---CAATC 1339
.||.||||||||.|||||.|||||..|.|||||.|||||..| ||
RBAM_009570__ 1293 CTTTTATAAAAAGCAGGGCATGTCGCTTTATGACGCGCTGCTGTCCA--- 1339
BSNT_01603___ 1340 TCTTTAACGAGTATGGTTTTTATCGTGAAGGGCTGAAATCCCTGACGCTG 1389
|.|||||.||.||.||||.|||.||||||||..||||.||..|||||.|.
RBAM_009570__ 1340 TTTTTAAAGAATACGGTTATTACCGTGAAGGCTTGAAGTCATTGACGTTA 1389
BSNT_01603___ 1390 AAAGGCAAACAAGGAGCAGAGCAAATTGAAGCGATTCTTGCTTCCTTCAG 1439
|||||.|||||.|||||||||||.|||...||.||.||..||||||||.|
RBAM_009570__ 1390 AAAGGAAAACAGGGAGCAGAGCAGATTTCCGCTATCCTGACTTCCTTCCG 1439
BSNT_01603___ 1440 ACAAAATCCGCCGCAGAAAATGGCGGGCAAACAGGTTGTCACAGCA---- 1485
|.|..||||||||.||.|.|||||.||.||||| ..|||| |||
RBAM_009570__ 1440 AAACGATCCGCCGAAGCAGATGGCCGGAAAACA---AATCAC-GCAGGCT 1485
BSNT_01603___ 1486 GAAGATTACGCTGTAAGCAAACGG----ACGCTTCTGACTGAA------- 1524
|||||.||..| ||||| ||| |||||.|
RBAM_009570__ 1486 GAAGACTATTC--------AACGGGAAAACG-----GACTGTATTTGCCG 1522
BSNT_01603___ 1525 AGCA--AAGAAGAAGCCATCGACTTGCCAAAATCAAATGTATTGAAATAC 1572
|.|| |.|||||||..||.||..||||.||.||||||||..|||||||.
RBAM_009570__ 1523 ATCATCATGAAGAAGATATTGATCTGCCGAAGTCAAATGTCCTGAAATAT 1572
BSNT_01603___ 1573 TTCCTGGAAGACGGGTCTTGGTTCTGTCTTCGTCCTTCTGGAACTGAGCC 1622
|||||.||||||||.|||||||||||.||||||||.||.|||||.|||||
RBAM_009570__ 1573 TTCCTTGAAGACGGCTCTTGGTTCTGCCTTCGTCCATCGGGAACGGAGCC 1622
BSNT_01603___ 1623 GAAGGTGAAATTTTATTTCGCCGTAAAAGGGTCATCTTTGGAAGACAGTG 1672
|||.|||||.||||||||||||||.||.||..|.|||||..|||||||.|
RBAM_009570__ 1623 GAAAGTGAAGTTTTATTTCGCCGTGAAGGGAACTTCTTTACAAGACAGCG 1672
BSNT_01603___ 1673 AACAGCGTCTTGCCGCCCTTTCTGAAGATGTAATGAAGACGGTGGATGAA 1722
||||||||||||||||..|.|||||||..||.|||||.|||||.||||..
RBAM_009570__ 1673 AACAGCGTCTTGCCGCATTATCTGAAGCCGTCATGAAAACGGTAGATGGC 1722
BSNT_01603___ 1723 ATTGTTGAGTCGACGGCAAAATAA 1746
||.||.||....||| ||||||
RBAM_009570__ 1723 ATAGTGGAAAAAACG---AAATAA 1743
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