Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01600 and RBAM_009550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence dna-align/BSNT_01600___glpK.1.9828.seq
# -bsequence dna-align/RBAM_009550___glpK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01600___glpK-RBAM_009550___glpK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01600___glpK-RBAM_009550___glpK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01600___glpK
# 2: RBAM_009550___glpK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1493
# Identity: 1212/1493 (81.2%)
# Similarity: 1212/1493 (81.2%)
# Gaps: 4/1493 ( 0.3%)
# Score: 4912.0
#
#
#=======================================
BSNT_01600___ 1 ATGGAAACGTACATTTTATCCTTAGATCAGGGGACGACAAGTTCAAGAGC 50
|||||.||.||.||||||||..|.||.||.||.||.||||||||||||||
RBAM_009550__ 1 ATGGAGACCTATATTTTATCAATTGACCAAGGCACAACAAGTTCAAGAGC 50
BSNT_01600___ 51 GATTCTGTTTAATAAAGAAGGCAAAATTGTCCACTCTGCTCAAAAGGAAT 100
||||||.||||||||||||||.|||||.||.||.||.|||||||||||||
RBAM_009550__ 51 GATTCTTTTTAATAAAGAAGGAAAAATCGTGCATTCCGCTCAAAAGGAAT 100
BSNT_01600___ 101 TTACACAATACTTCCCGCATCCTGGCTGGGTTGAGCATAATGCCAATGAA 150
|.|||||..|.|||||.||.||.||||||||.|||||.|||||.||.|||
RBAM_009550__ 101 TCACACAGCATTTCCCTCAGCCGGGCTGGGTGGAGCACAATGCGAACGAA 150
BSNT_01600___ 151 ATTTGGGGCTCTGTCCTCGCGGTTATCGCCTCAGTCATCTCTGAATCAGG 200
||||||||.||.||.|||||.||||||||..|.||.|||||.||.||.||
RBAM_009550__ 151 ATTTGGGGATCGGTGCTCGCCGTTATCGCGACTGTGATCTCCGAGTCCGG 200
BSNT_01600___ 201 AATCAGCGCTTCTCAAATTGCCGGCATCGGCATCACGAACCAGCGCGAGA 250
||||||||||..||||||||||||||||||||||||||||||..|.||.|
RBAM_009550__ 201 AATCAGCGCTGATCAAATTGCCGGCATCGGCATCACGAACCAAAGGGAAA 250
BSNT_01600___ 251 CGACGGTTGTGTGGGATAAAGATACAGGAAGTCCTGTCTATAATGCAATC 300
|||||||.||.||||||||||||||.||||..||.||.||.|||||.||.
RBAM_009550__ 251 CGACGGTCGTATGGGATAAAGATACCGGAAAGCCGGTATACAATGCGATT 300
BSNT_01600___ 301 GTTTGGCAGTCCAGACAGACGTCCGGCATTTGTGAGGAACTTCGTGAAAA 350
||.|||||.||.|||||.||.|||||||||||.||.||.|||||||||||
RBAM_009550__ 301 GTGTGGCAATCGAGACAAACATCCGGCATTTGCGAAGAGCTTCGTGAAAA 350
BSNT_01600___ 351 AGGATATAATGATAAATTCAGAAAAAAAACTGGGCTTTTAATCGATCCAT 400
||||||||||||||.|||||||.|||||||.||.|||||.|||||.||.|
RBAM_009550__ 351 AGGATATAATGATACATTCAGAGAAAAAACGGGACTTTTGATCGACCCTT 400
BSNT_01600___ 401 ACTTCTCCGGCACGAAGGTGAAGTGGATTTTAGACAATGTGGAAGGCGCG 450
|.|||||.||.|||||.||.||.||||||.|.||||||||.|||||||||
RBAM_009550__ 401 ATTTCTCAGGAACGAAAGTCAAATGGATTCTTGACAATGTAGAAGGCGCG 450
BSNT_01600___ 451 AGAGAAAAAGCGGAAAAAGGCGAGCTGCTGTTTGGAACGATTGATACGTG 500
.|.||||||||||||||.||..|.||.|||||.||||||||||||.|.||
RBAM_009550__ 451 CGGGAAAAAGCGGAAAACGGAAATCTTCTGTTCGGAACGATTGATTCATG 500
BSNT_01600___ 501 GCTCATTTGGAAAATGTCAGGCGGAAAAGCGCATGTGACCGATTACTCCA 550
||||||.|||||||||||.||.||....|||||.||.||.|||||.||||
RBAM_009550__ 501 GCTCATCTGGAAAATGTCCGGAGGGGCGGCGCACGTAACGGATTATTCCA 550
BSNT_01600___ 551 ATGCCTCAAGAACACTGATGTTTAATATTTACGATTTAAAATGGGACGAT 600
|.||.||||||||.||||||||||||||..|.||.|||||||||||.||.
RBAM_009550__ 551 ACGCTTCAAGAACGCTGATGTTTAATATACATGAATTAAAATGGGATGAC 600
BSNT_01600___ 601 GAACTGCTCGACATTCTAGGCGTACCGAAATCCATGCTCCCTGAAGTGAA 650
||.|||||.||.|||.|||||||.||||||||.|||||.||.||||||||
RBAM_009550__ 601 GAGCTGCTTGATATTTTAGGCGTGCCGAAATCAATGCTGCCGGAAGTGAA 650
BSNT_01600___ 651 GCCGTCCTCTCATGTGTATGCGGAGACTGTTGATTATCACTTCTTCGGAA 700
.|||||.|||||||||||.|||.|.||.|||||||||||.||||||||.|
RBAM_009550__ 651 ACCGTCTTCTCATGTGTACGCGAAAACGGTTGATTATCATTTCTTCGGTA 700
BSNT_01600___ 701 AAAATATCCCGATTGCGGGAGCGGCAGGCGACCAGCAGTCCGCATTGTTC 750
||||.||||||||||||||||||||.||.|||||||||||.||..|||||
RBAM_009550__ 701 AAAACATCCCGATTGCGGGAGCGGCCGGAGACCAGCAGTCTGCGCTGTTC 750
BSNT_01600___ 751 GGCCAGGCATGCTTTGAAGAAGGCATGGGGAAAAACACATACGGCACAGG 800
||.|||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_009550__ 751 GGTCAGGCGTGCTTTGAAGAAGGCATGGGGAAAAACACATACGGCACAGG 800
BSNT_01600___ 801 ATGTTTCATGCTGATGAATACCGGGGAAAAAGCAATTAAGTCCGAACATG 850
.||.||.|||||||||||||||||.||||||||.||.|..||.||.||.|
RBAM_009550__ 801 CTGCTTTATGCTGATGAATACCGGAGAAAAAGCCATCACTTCTGATCACG 850
BSNT_01600___ 851 GGCTTTTGACAACAATCGCTTGGGGCATT-GACGGAAAAGTGAACTATGC 899
|.|||.||||.||||||||.||||| ||| |||||||||||..|.|||||
RBAM_009550__ 851 GCCTTCTGACGACAATCGCCTGGGG-ATTAGACGGAAAAGTCGAGTATGC 899
BSNT_01600___ 900 GTTAGAAGGAAGCATTTTTGTCGCAGGCTCTGCCATCCAGTGGCTTAGAG 949
..|.|||||||||||.|||||||||||.|||||||||||.|||||.||||
RBAM_009550__ 900 ACTGGAAGGAAGCATCTTTGTCGCAGGTTCTGCCATCCAATGGCTGAGAG 949
BSNT_01600___ 950 ACGGTTTGAGAATGTTCCAGGATTCATCGCTAAGCGAATCTTATGCAGAA 999
||||..||.|.||||||||.||||||.....||||||..|.||.|||||.
RBAM_009550__ 950 ACGGCATGCGGATGTTCCAAGATTCAAAAGAAAGCGAGACATACGCAGAG 999
BSNT_01600___ 1000 AAAGTGGATTCAACTGACGGCGTGTATGTCGTTCCAGCATTTGTCGGACT 1049
...||||||||..|||||||.||.||||||||.||.||.||.||||||.|
RBAM_009550__ 1000 CGTGTGGATTCCGCTGACGGTGTTTATGTCGTGCCCGCTTTCGTCGGATT 1049
BSNT_01600___ 1050 GGGAACGCCTTACTGGGACAGTGATGTGCGCGGTTCGGTTTTCGGCCTGA 1099
.||.||.||.||||||||||||||.||||||||.||.|||||||||||||
RBAM_009550__ 1050 AGGCACACCGTACTGGGACAGTGACGTGCGCGGCTCAGTTTTCGGCCTGA 1099
BSNT_01600___ 1100 CAAGAGGGACAACAAAAGAGCACTTTATCCGTGCGACACTGGAGTCATTG 1149
||.|.||.||.||.||.|||||.||||||||.||.||.||.||.||..|.
RBAM_009550__ 1100 CACGCGGAACGACGAAGGAGCATTTTATCCGGGCTACGCTTGAATCTCTC 1149
BSNT_01600___ 1150 GCTTATCAGACAAAAGATGTGCTTGACGCAATGGAAGCAGATTCAAACAT 1199
|||||||||.|.||||||||||||||.||.|||||.||.||||||..|||
RBAM_009550__ 1150 GCTTATCAGGCGAAAGATGTGCTTGATGCCATGGAGGCTGATTCAGGCAT 1199
BSNT_01600___ 1200 TTCATTAAAGACGCTTCGTGTAGATGGAGGAGCTGTGAAAAACAATTTCC 1249
.||.|||||.||..|.||||||||.||.|||||.||.|||||.||.||||
RBAM_009550__ 1200 CTCTTTAAAAACATTGCGTGTAGACGGCGGAGCGGTAAAAAATAACTTCC 1249
BSNT_01600___ 1250 TGATGCAGTTCCAAGGAGACCTG-TTGAATGTTCCTGTGGAGCGCCCGGA 1298
|.||||||||||||.|.|||.|| ||| ||||.||.||.||.||.|||||
RBAM_009550__ 1250 TCATGCAGTTCCAAAGCGACTTGCTTG-ATGTGCCGGTCGAACGTCCGGA 1298
BSNT_01600___ 1299 AATTAATGAAACGACTGCGCTTGGCGCGGCTTATTTGGCAGGTATCGCTG 1348
|||||||||||||||.|||||.||.||.||.||||||||.||.|||||||
RBAM_009550__ 1299 AATTAATGAAACGACGGCGCTCGGTGCCGCGTATTTGGCCGGAATCGCTG 1348
BSNT_01600___ 1349 TGGGATTCTGGAAGGACCGTTCTGAAATCGCGAACCAGTGGAATCTGGAT 1398
|.||.|.||||||||||.|..||||||||||..|.||.|||||.||.|||
RBAM_009550__ 1349 TCGGCTACTGGAAGGACAGCACTGAAATCGCTGATCAATGGAACCTTGAT 1398
BSNT_01600___ 1399 AAACGGTTTGAGCCTGAATTAGAAGAAGAAAAACGAAATGAGCTGTATAA 1448
||.|..||..|.||.|||.|.|||||.||||||||..||||..||||...
RBAM_009550__ 1399 AAGCAATTCAAACCGGAAATGGAAGATGAAAAACGCGATGAATTGTACGG 1448
BSNT_01600___ 1449 AGGCTGGCAAAAAGCCGTGAAAGCAGCTATGGCTTTTAAATAA 1491
.||.|||.|||||||.||.||.|||||||||||||||||||||
RBAM_009550__ 1449 CGGATGGAAAAAAGCAGTAAATGCAGCTATGGCTTTTAAATAA 1491
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.