Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01598 and RBAM_009530

See Amino acid alignment / Visit BSNT_01598 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence dna-align/BSNT_01598___glpP.1.9828.seq
#    -bsequence dna-align/RBAM_009530___glpP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01598___glpP-RBAM_009530___glpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01598___glpP-RBAM_009530___glpP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01598___glpP
# 2: RBAM_009530___glpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity:     449/582 (77.1%)
# Similarity:   449/582 (77.1%)
# Gaps:          12/582 ( 2.1%)
# Score: 1669.5
# 
#
#=======================================

BSNT_01598___      1 ATGAGTTTTCACAACCAGCCGATCTTACCGGCTATTCGCAATATGAAGCA     50
                     |||||||||||||||||||.|||..|||||||.||.||.||.||||||||
RBAM_009530__      1 ATGAGTTTTCACAACCAGCAGATTCTACCGGCAATCCGGAACATGAAGCA     50

BSNT_01598___     51 ATTTGATGAGTTTTTAAACAGTTCGTTCTCTTACGGTGTTATTCTTGATA    100
                     |||.||||..||||||.|.|||.||||||..|||||.||.|||.|.||||
RBAM_009530__     51 ATTCGATGCATTTTTAGAAAGTCCGTTCTTATACGGCGTCATTTTAGATA    100

BSNT_01598___    101 TTCATCTCGGCCAGCTGAAGGGCGTGATCAAAGAAGCGCAAAAGCACGGA    150
                     |.||.|||||.||..|.||.||.||..|.||.||||||.||||.||||||
RBAM_009530__    101 TCCACCTCGGTCAATTAAAAGGTGTCGTGAATGAAGCGAAAAAACACGGA    150

BSNT_01598___    151 AAGAAC--ATGATGGTGCACGTCGATCTCATTCAAGGGATTAAGCATGAC    198
                     |  |||  .|||||||.|||||||||.|.|||||.||.|||||||||||.
RBAM_009530__    151 A--AACTTCTGATGGTTCACGTCGATTTAATTCACGGCATTAAGCATGAT    198

BSNT_01598___    199 GAATACGGTGCGGAATTTATATGTCAGGATATCAAGCCCGCTGGGATTAT    248
                     ||||||||||||||.||.||.||.|||||||||..||||||.||.||.||
RBAM_009530__    199 GAATACGGTGCGGAGTTCATTTGCCAGGATATCCGGCCCGCGGGCATCAT    248

BSNT_01598___    249 TTCCACAAGATCGAAC-GTGATTGCCAAAGCGAAGCAGAAGAAAATTTAT    297
                     |||.||.||||| |.| ||.||.|.|||||||||.||.||||||||.||.
RBAM_009530__    249 TTCGACGAGATC-ATCAGTCATCGTCAAAGCGAAACAAAAGAAAATATAC    297

BSNT_01598___    298 GCCATTCAGCGCCTGTTTTTGCTT-GATACAAGCGCGATGGAGAAAAGCA    346
                     ||.||.|||||.||||||.| ||| |||||||||||.|||||||||||.|
RBAM_009530__    298 GCGATCCAGCGTCTGTTTCT-CTTGGATACAAGCGCCATGGAGAAAAGTA    346

BSNT_01598___    347 TGGAGTTTATCGGCAAGCATAAGCCTGACTTCATCGAAGTGCTTCCCGGC    396
                     ||||.||..||||.|||||||||||||||||.|||||.||.||.||.|||
RBAM_009530__    347 TGGAATTCGTCGGAAAGCATAAGCCTGACTTTATCGAGGTTCTCCCGGGC    396

BSNT_01598___    397 ATCGTTCCGTCAC-TCATTCAG-GAAATAAAAGAGAAAACAGGGATTCCC    444
                     |||||||||  || |.|.|||| |||||.|||||.|..||.||||||||.
RBAM_009530__    397 ATCGTTCCG--ACTTTAATCAGAGAAATTAAAGAAATGACGGGGATTCCG    444

BSNT_01598___    445 ATCTTTGCCGGGGGTTTCATCCGTACGGAAGAGGATGTAGAGCAGGCATT    494
                     ||.||||||||.||.||||||||.|||||..||||.||.||..|.||.||
RBAM_009530__    445 ATTTTTGCCGGCGGCTTCATCCGCACGGAGCAGGACGTTGAAAACGCCTT    494

BSNT_01598___    495 GAAAGCGGGGGCTGTAGCTGTCACAACATCTAATACCAAATTGTGGAAAA    544
                     |.|.||.||.||....||.||.|||||.||..|.|||.||.|.|||...|
RBAM_009530__    495 GCAGGCAGGAGCCACGGCCGTGACAACTTCAGACACCGAACTATGGGCTA    544

BSNT_01598___    545 AATATGAAAACTTTTTGACAGAAAGTGATTGA    576
                     ||||||||.|.|.|.|||||.|||..||||||
RBAM_009530__    545 AATATGAACATTCTATGACAAAAAAAGATTGA    576


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