Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01539 and RBAM_009370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:13
# Commandline: needle
# -asequence dna-align/BSNT_01539___cspB.1.9828.seq
# -bsequence dna-align/RBAM_009370___cspB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01539___cspB-RBAM_009370___cspB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01539___cspB-RBAM_009370___cspB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01539___cspB
# 2: RBAM_009370___cspB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 194/204 (95.1%)
# Similarity: 194/204 (95.1%)
# Gaps: 3/204 ( 1.5%)
# Score: 931.0
#
#
#=======================================
BSNT_01539___ 1 ATGTTAGAAGGTAAAGTAAAATGGTTCAACTCTGAAAAAGGTTTCGGATT 50
|||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_009370__ 1 ATGTTAGAAGGTAAAGTAAAATGGTTCAACTCTGAAAAAGGATTCGGATT 50
BSNT_01539___ 51 CATCGAAGTAGAAGGTCAAGACGATGTATTCGTTCATTTCTCTGCTATTC 100
||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_009370__ 51 CATCGAAGTAGAAGGTCAAGACGATGTATTCGTTCACTTCTCTGCTATTC 100
BSNT_01539___ 101 AAGGCGAAGGCTTCAAAACTTTAGAAGAAGGCCAAGCTGTTTCTTTTGAA 150
|||||||||||||||||||||||||||||||||||.||||||||||.|||
RBAM_009370__ 101 AAGGCGAAGGCTTCAAAACTTTAGAAGAAGGCCAATCTGTTTCTTTCGAA 150
BSNT_01539___ 151 ATCGTTGAAGGAAACCGCGGACCACAAGCTGCTAACGTTACTAAAGAAGC 200
||||||||||||||||||||||||||||||||||||||.|| |.||||
RBAM_009370__ 151 ATCGTTGAAGGAAACCGCGGACCACAAGCTGCTAACGTAAC---AAAAGC 197
BSNT_01539___ 201 GTAA 204
.|||
RBAM_009370__ 198 ATAA 201
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