Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01528 and RBAM_009280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence dna-align/BSNT_01528___yhbJ.1.9828.seq
# -bsequence dna-align/RBAM_009280___yhbJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01528___yhbJ-RBAM_009280___yhbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01528___yhbJ-RBAM_009280___yhbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01528___yhbJ
# 2: RBAM_009280___yhbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 670
# Identity: 577/670 (86.1%)
# Similarity: 577/670 (86.1%)
# Gaps: 8/670 ( 1.2%)
# Score: 2503.0
#
#
#=======================================
BSNT_01528___ 1 ATGATAGAGGATGAAACGAAAGGAGAAAACAAAATGAACAGAGGACGTTT 50
|||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_009280__ 1 ATGATAGAGGAAGAAACGAAAGGAGAAAACAAAATGAACAGAGGACGTTT 50
BSNT_01528___ 51 AATTCTGACCAACATTATCGGTTTGATTGTTGTTCTTGCAATTATAGCTG 100
|||||||||||||||||||||||||||||||||||||||||||||||..|
RBAM_009280__ 51 AATTCTGACCAACATTATCGGTTTGATTGTTGTTCTTGCAATTATAGGCG 100
BSNT_01528___ 101 GAGGTGCTTACTACTATTATCAAAGCACAAACTACGTAAAAACAGATGAA 150
|||||||||||||||||||||||||||||.||||.||||||||.||||||
RBAM_009280__ 101 GAGGTGCTTACTACTATTATCAAAGCACACACTATGTAAAAACCGATGAA 150
BSNT_01528___ 151 GCAAAAGTAGCGGGCGATATGGCTGCTATTACTGCTCCAGCAGCAGGTAA 200
||||||||.||.||.||.|||||||||||.||.|||||.||.||.|||||
RBAM_009280__ 151 GCAAAAGTTGCCGGTGACATGGCTGCTATCACAGCTCCTGCTGCGGGTAA 200
BSNT_01528___ 201 AGTATCTGACTGGGATCTGGATGAAGGAAAAACAGT--GAAAAAAGGCGA 248
||||.||||||||.|.||.|||||.||.|||..||| |.||||| |||
RBAM_009280__ 201 AGTAACTGACTGGAACCTTGATGAGGGGAAAGAAGTAAGCAAAAA--CGA 248
BSNT_01528___ 249 CACAGTTGCAAAAATCAAAGGCGAACAAACTGTTGACGTAAAATCCATTA 298
|...|||||||||||||||||..|.||||.||.||||||||||.||||.|
RBAM_009280__ 249 CGTTGTTGCAAAAATCAAAGGACAGCAAAATGCTGACGTAAAAGCCATCA 298
BSNT_01528___ 299 TGGATGGAACAATTGTGAAAAACGAAGTGAAAAACGGACAAACCGTACAA 348
|||||||||||||.|||||||||||||||||||||||.||||..||.|||
RBAM_009280__ 299 TGGATGGAACAATCGTGAAAAACGAAGTGAAAAACGGCCAAATGGTGCAA 348
BSNT_01528___ 349 GCTGGTACAACAATTGCACA--AACGATTGACATGGACAACCTATACATC 396
||.|||||.||||||||.|| || |||||||||.|..||||.||||||
RBAM_009280__ 349 GCCGGTACGACAATTGCCCAGGAA--ATTGACATGAAACACCTTTACATC 396
BSNT_01528___ 397 ACAGCAAATATTAAAGAAACAGATATTGCGGATATTGAAGTAGGAAATAG 446
||.|||||.||||||||||||||.|||...||.||||||||||||||.|.
RBAM_009280__ 397 ACTGCAAACATTAAAGAAACAGACATTAGAGACATTGAAGTAGGAAACAA 446
BSNT_01528___ 447 TGTAGACGTTGTAGTTGACGGAGACCCTGATACAACATTTGACGGTACTG 496
.||||||||..|.||||||||.||||||.||||||||||||||||.||.|
RBAM_009280__ 447 AGTAGACGTAATTGTTGACGGCGACCCTAATACAACATTTGACGGAACAG 496
BSNT_01528___ 497 TGGAAGAAATTGGCTATGCGACTAACTCAACTTTTGATATGCTTCCTTCT 546
|.||||||||.||.||||||||.||.|||||.|||||||||||.||||||
RBAM_009280__ 497 TAGAAGAAATCGGTTATGCGACAAATTCAACATTTGATATGCTGCCTTCT 546
BSNT_01528___ 547 ACAAATTCAAGCGGAAACTACACAAAAGTAACACAAAAAATTCCTGTGAA 596
.||||.||||||||.|||||||||||||||||.||||||.|||||||.||
RBAM_009280__ 547 TCAAACTCAAGCGGCAACTACACAAAAGTAACGCAAAAAGTTCCTGTTAA 596
BSNT_01528___ 597 AATTTCAATCAAAAACCCATCTGATAAGGTGCTTCCTGGAATGAATGCAT 646
|||||||.|||..|||||||||||.||||||||||||||.|||||.||||
RBAM_009280__ 597 AATTTCACTCAGCAACCCATCTGACAAGGTGCTTCCTGGTATGAACGCAT 646
BSNT_01528___ 647 CTGTTAAAATTTCTGAGTAA 666
||||.|||||.|||||.|||
RBAM_009280__ 647 CTGTAAAAATCTCTGAATAA 666
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