Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01527 and RBAM_009270

See Amino acid alignment / Visit BSNT_01527 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence dna-align/BSNT_01527___yhbI.1.9828.seq
#    -bsequence dna-align/RBAM_009270___yhbI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01527___yhbI-RBAM_009270___yhbI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01527___yhbI-RBAM_009270___yhbI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01527___yhbI
# 2: RBAM_009270___yhbI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 476
# Identity:     362/476 (76.1%)
# Similarity:   362/476 (76.1%)
# Gaps:          22/476 ( 4.6%)
# Score: 1355.0
# 
#
#=======================================

BSNT_01527___      1 TTGACTGAATCAGAACGTGCTTTGCTCACTTTTGAACAGCTCTTCGATAC     50
                     .|||.|||||||||.|..||||||||||.|||||||||.||.||.|||||
RBAM_009270__      1 GTGATTGAATCAGAGCTCGCTTTGCTCAGTTTTGAACAACTGTTTGATAC     50

BSNT_01527___     51 GTCTCGGGCGATATATAAAAAACAGAAGAAGATATTGGAGATTGTGCTTG    100
                     .||..|..||||.||.|||||.|||||.|.|||..||||||..||.||||
RBAM_009270__     51 TTCCAGATCGATTTACAAAAAGCAGAAAATGATTCTGGAGACAGTTCTTG    100

BSNT_01527___    101 AGCCTTTTGATATTACAGTCCTTCAATATTTGCTGATGTTTAAAATTCAT    150
                     |.|||||||||||||||||.||.||.|||.||||||||||.|||||.|||
RBAM_009270__    101 AACCTTTTGATATTACAGTGCTGCAGTATCTGCTGATGTTCAAAATACAT    150

BSNT_01527___    151 CAAAGCGGAAGCACCCCGCT---AAGCAAGCTGGCAATGTCGCTTGATCT    197
                     .|.|||..||||||.|.|||   |||   ||||||..|||||||||||||
RBAM_009270__    151 AAGAGCAAAAGCACGCAGCTTTCAAG---GCTGGCTTTGTCGCTTGATCT    197

BSNT_01527___    198 TAAGCCTGCTTCTGTGACGCGGATGACAGATATTCTGTATAAGCGCC---    244
                     .||.||.||.|||||.|||.|.|||||.|||||||||||||||||||   
RBAM_009270__    198 GAAACCGGCGTCTGTCACGAGAATGACCGATATTCTGTATAAGCGCCGCC    247

BSNT_01527___    245 -AATTGAT-GAATCGA-TATGACAGTCCGGATGACCGCCGTATCGTCATG    291
                      |||.|.| |.|.||| |||.||      ||.|||||.|||.|.||.|||
RBAM_009270__    248 TAATGGTTCGGAGCGACTATCAC------GACGACCGGCGTGTTGTTATG    291

BSNT_01527___    292 ATTCAGTTAACCGAAGAGGGGGAAGAACTGATAGAAAAAGCCGCTGTGCA    341
                     |||||||||||||||||||||||||||||..||.|.|||||.|||||.||
RBAM_009270__    292 ATTCAGTTAACCGAAGAGGGGGAAGAACTTCTAAAGAAAGCTGCTGTTCA    341

BSNT_01527___    342 ATATGC--AAAAATGGGTGCTGGCTTGTACCAAAAGCTTGATACCTCCCA    389
                     ||||||  |||||  |..||.|.|||.||||...||||..|||||.|..|
RBAM_009270__    342 ATATGCCGAAAAA--GCGGCGGTCTTATACCGGCAGCTCAATACCGCTGA    389

BSNT_01527___    390 ACTGCAGTATTTGCGCAAACTAGCCGGAAGCTTAACGAAGCTTGCTGAAG    439
                     |||||||||..|||||||.||.||.|.|||.||||||||||||||..|.|
RBAM_009270__    390 ACTGCAGTACCTGCGCAAGCTTGCGGAAAGTTTAACGAAGCTTGCAAACG    439

BSNT_01527___    440 GCTGTTCAGAAAAAAGCGGTAATTAA    465
                     |||||.|||..||||.|||.||.|||
RBAM_009270__    440 GCTGTGCAGTGAAAAACGGAAAATAA    465


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