Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01526 and RBAM_009260

See Amino acid alignment / Visit BSNT_01526 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence dna-align/BSNT_01526___yhbH.1.9828.seq
#    -bsequence dna-align/RBAM_009260___yhbH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01526___yhbH-RBAM_009260___yhbH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01526___yhbH-RBAM_009260___yhbH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01526___yhbH
# 2: RBAM_009260___yhbH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1190
# Identity:     984/1190 (82.7%)
# Similarity:   984/1190 (82.7%)
# Gaps:          16/1190 ( 1.3%)
# Score: 4104.5
# 
#
#=======================================

BSNT_01526___      1 ATGTCCCAAAATGACAGCGGCCATTTTTTGATTTCTGAGGAAAACTGGTC     50
                     |||||||..|||||||||||..|||||||||||||.||||||.|||||||
RBAM_009260__      1 ATGTCCCGTAATGACAGCGGAAATTTTTTGATTTCAGAGGAAGACTGGTC     50

BSNT_01526___     51 CCTCCATCGCAAAGGCTTCGATGACCAGCAGCGCCACCAGAAAAAAGTGC    100
                     ||||||||||||||||||.||.|||||||||||||||||.||.|||||.|
RBAM_009260__     51 CCTCCATCGCAAAGGCTTTGACGACCAGCAGCGCCACCAAAAGAAAGTAC    100

BSNT_01526___    101 AGGAAGCGATCAAAAACAATCTTCCGGACCTCGTAACTGAGGAAAGCATT    150
                     ||||||||||.||||||||.||||||||.||.||.|||||||||||||||
RBAM_009260__    101 AGGAAGCGATAAAAAACAACCTTCCGGATCTTGTCACTGAGGAAAGCATT    150

BSNT_01526___    151 ATTATGTCTAATGGAAAAGATGTAGTGAAGATCCCAATCCGTTCACTTGA    200
                     ||||||||.||.|||||||||||.|||||.|||||.||.|||||.|||||
RBAM_009260__    151 ATTATGTCCAACGGAAAAGATGTCGTGAAAATCCCGATTCGTTCGCTTGA    200

BSNT_01526___    201 TGAGTATAAAATCCGTTATAACTATGATAAAAATAAACATGTAGGGCAAG    250
                     |||.||||||||||||||||||||||||||||||||||||||.||.||||
RBAM_009260__    201 TGAATATAAAATCCGTTATAACTATGATAAAAATAAACATGTCGGCCAAG    250

BSNT_01526___    251 GAGACGGCGAGAGCCAGGTTGGAGATGTTGTGGCCCGGGATGGATCAGAC    300
                     |.||||||||.|||.|.||.||.|||||.|||||..|.||.||..||||.
RBAM_009260__    251 GCGACGGCGACAGCGAAGTCGGCGATGTCGTGGCAAGAGACGGCGCAGAT    300

BSNT_01526___    301 AAAAAACAAGGGCCTGGAAAAGGGCAGGGTGCCGGTGATCAGGCAGGCGA    350
                     |||||.||.||..||||||||||.|||||.||.||.||||||||||||||
RBAM_009260__    301 AAAAAGCAGGGTGCTGGAAAAGGCCAGGGAGCAGGCGATCAGGCAGGCGA    350

BSNT_01526___    351 GGATTATTATGAAGCGGAAGTTTCATTAATGGATTTAGAAGAAGCGCTTT    400
                     |||||||||||||||||||||||||||.||||||.|.|||||||||||.|
RBAM_009260__    351 GGATTATTATGAAGCGGAAGTTTCATTGATGGATCTGGAAGAAGCGCTGT    400

BSNT_01526___    401 TTAAAGAATTAGAGCTTCCGAATCTCCAACAAAAAGAGCGGGACAATATC    450
                     ||.|.||||||||.||.||||||||.||.|||||.||..|||||||||||
RBAM_009260__    401 TTCAGGAATTAGAACTGCCGAATCTGCAGCAAAAGGAAAGGGACAATATC    450

BSNT_01526___    451 ATTCATACAGATATCGAGTTTAATGATATCCGTAAAACAGGGTTAACCGG    500
                     .|.|||||.|||||||||||.|||||||||||.|||||.|||.|.||.||
RBAM_009260__    451 GTCCATACCGATATCGAGTTCAATGATATCCGGAAAACCGGGCTGACAGG    500

BSNT_01526___    501 TAATATTGATAAGAAAAGAACGATGATGTCAGCCTTTAAACGAAACGCAA    550
                     .|||||.|||||||||||.||||||.||||.||||.||||||||||||.|
RBAM_009260__    501 GAATATCGATAAGAAAAGGACGATGCTGTCGGCCTATAAACGAAACGCCA    550

BSNT_01526___    551 TGTCAGGAAAACCGTCGTTCTACCCAATTTATCCGGAGGACCTGAAATAT    600
                     ||.||||.||.||||||||.|||||.|||||||||||.||.||||||||.
RBAM_009260__    551 TGACAGGCAAGCCGTCGTTTTACCCTATTTATCCGGAAGATCTGAAATAC    600

BSNT_01526___    601 AAGACGTGGAATGACATCACAAAGCCCGAATCAAAAGCCGTCGTTTTAGC    650
                     ||.||.||||||||..|.||.|||||.|||||.|||||.|||||||||||
RBAM_009260__    601 AAAACATGGAATGATGTGACGAAGCCGGAATCGAAAGCTGTCGTTTTAGC    650

BSNT_01526___    651 CATGATGGATACAAGCGGCAGTATGGGGGTTTGGGAAAAATACATGGCCA    700
                     .|||||||||||||||||....|||||.||.||||||||.||.|||||.|
RBAM_009260__    651 GATGATGGATACAAGCGGTTCGATGGGCGTATGGGAAAAGTATATGGCGA    700

BSNT_01526___    701 GAAGCTTCTTTTTCTGGATGACCCGTTTTTTGCGGACAAAATACGAGACT    750
                     |.|||||||||||.||||||||.||.|||||.||||||||.||.||.||.
RBAM_009260__    701 GGAGCTTCTTTTTTTGGATGACACGATTTTTACGGACAAAGTATGAAACG    750

BSNT_01526___    751 GTGGAAATTGAATTTATTGCCCATCATACAGAAGC-AAGAGTGGTCTCGG    799
                     ||.||.||.||||||||.|||||.|||||.||||| ||| ||.||.||||
RBAM_009260__    751 GTTGATATCGAATTTATCGCCCACCATACGGAAGCGAAG-GTTGTGTCGG    799

BSNT_01526___    800 AGGAGGATTTTTTCTCAAAGGGAGAAAGCGGCGGAACCATTTGTTCTTCC    849
                     |.||.|||||||||||.||.||.||.|||||.||.|||||.|||||.|||
RBAM_009260__    800 AAGAAGATTTTTTCTCGAAAGGCGAGAGCGGGGGCACCATCTGTTCCTCC    849

BSNT_01526___    850 GTATATCGGAAGTCGCTTGAGCTTATTGATGAAAAGTACAATCCCGCCCG    899
                     ||.||.||||||||.|||||..|.|||||||||||.||..|.||||||||
RBAM_009260__    850 GTTTACCGGAAGTCTCTTGAATTAATTGATGAAAAATATGACCCCGCCCG    899

BSNT_01526___    900 CTATAACATTTATCCGTTTCATTTTTCTGACGGTGACAACCTGACATCTG    949
                     |||.|||||.|||||||||||||||||.|||||.||.||||||||.||.|
RBAM_009260__    900 CTACAACATCTATCCGTTTCATTTTTCAGACGGAGATAACCTGACTTCGG    949

BSNT_01526___    950 ATAACGCGCGCTGTGTGAAGCTGGTCAATGATATTATGAAGAAGGCCAAT    999
                     |||||||.||.||.||.|||||.||||||||.||.|||||.||..|.|||
RBAM_009260__    950 ATAACGCCCGGTGCGTAAAGCTCGTCAATGACATCATGAAAAAATCGAAT    999

BSNT_01526___   1000 CTATTCTGTTACGGCGAGGTCAATCAGTACAACAGGCATTCAACGTTAAT   1049
                     ||.|||||||||||.|||||||||||.||.|||||||||||.||..|.||
RBAM_009260__   1000 CTGTTCTGTTACGGTGAGGTCAATCAATATAACAGGCATTCCACCCTCAT   1049

BSNT_01526___   1050 GTCTGCATATAAAAATGTAAAAGATGAGAAATTTAAGTACTATATTTTAA   1099
                     |||.||.|||||||||||.||||||||.||||||||.|||||.||..|.|
RBAM_009260__   1050 GTCCGCCTATAAAAATGTCAAAGATGATAAATTTAAATACTACATCCTGA   1099

BSNT_01526___   1100 AACAGAAATCTGATGTTTTTCAGGCTCTAAAGAACTTTTTCAGAAATGAA   1149
                     ||||||||||.||.||.|||||.||.||.||.|.||||||.|.||||||.
RBAM_009260__   1100 AACAGAAATCAGACGTATTTCAAGCGCTGAAAAGCTTTTTTAAAAATGAG   1149

BSNT_01526___   1150 GAGTCTGGTGTAAGC----CATC------AATTTTCGTAA   1179
                     ||.||.|||||||||    ||||      |||    .|||
RBAM_009260__   1150 GAATCCGGTGTAAGCAAAGCATCGTATGAAAT----ATAA   1185


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