Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01526 and RBAM_009260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence dna-align/BSNT_01526___yhbH.1.9828.seq
# -bsequence dna-align/RBAM_009260___yhbH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01526___yhbH-RBAM_009260___yhbH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01526___yhbH-RBAM_009260___yhbH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01526___yhbH
# 2: RBAM_009260___yhbH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1190
# Identity: 984/1190 (82.7%)
# Similarity: 984/1190 (82.7%)
# Gaps: 16/1190 ( 1.3%)
# Score: 4104.5
#
#
#=======================================
BSNT_01526___ 1 ATGTCCCAAAATGACAGCGGCCATTTTTTGATTTCTGAGGAAAACTGGTC 50
|||||||..|||||||||||..|||||||||||||.||||||.|||||||
RBAM_009260__ 1 ATGTCCCGTAATGACAGCGGAAATTTTTTGATTTCAGAGGAAGACTGGTC 50
BSNT_01526___ 51 CCTCCATCGCAAAGGCTTCGATGACCAGCAGCGCCACCAGAAAAAAGTGC 100
||||||||||||||||||.||.|||||||||||||||||.||.|||||.|
RBAM_009260__ 51 CCTCCATCGCAAAGGCTTTGACGACCAGCAGCGCCACCAAAAGAAAGTAC 100
BSNT_01526___ 101 AGGAAGCGATCAAAAACAATCTTCCGGACCTCGTAACTGAGGAAAGCATT 150
||||||||||.||||||||.||||||||.||.||.|||||||||||||||
RBAM_009260__ 101 AGGAAGCGATAAAAAACAACCTTCCGGATCTTGTCACTGAGGAAAGCATT 150
BSNT_01526___ 151 ATTATGTCTAATGGAAAAGATGTAGTGAAGATCCCAATCCGTTCACTTGA 200
||||||||.||.|||||||||||.|||||.|||||.||.|||||.|||||
RBAM_009260__ 151 ATTATGTCCAACGGAAAAGATGTCGTGAAAATCCCGATTCGTTCGCTTGA 200
BSNT_01526___ 201 TGAGTATAAAATCCGTTATAACTATGATAAAAATAAACATGTAGGGCAAG 250
|||.||||||||||||||||||||||||||||||||||||||.||.||||
RBAM_009260__ 201 TGAATATAAAATCCGTTATAACTATGATAAAAATAAACATGTCGGCCAAG 250
BSNT_01526___ 251 GAGACGGCGAGAGCCAGGTTGGAGATGTTGTGGCCCGGGATGGATCAGAC 300
|.||||||||.|||.|.||.||.|||||.|||||..|.||.||..||||.
RBAM_009260__ 251 GCGACGGCGACAGCGAAGTCGGCGATGTCGTGGCAAGAGACGGCGCAGAT 300
BSNT_01526___ 301 AAAAAACAAGGGCCTGGAAAAGGGCAGGGTGCCGGTGATCAGGCAGGCGA 350
|||||.||.||..||||||||||.|||||.||.||.||||||||||||||
RBAM_009260__ 301 AAAAAGCAGGGTGCTGGAAAAGGCCAGGGAGCAGGCGATCAGGCAGGCGA 350
BSNT_01526___ 351 GGATTATTATGAAGCGGAAGTTTCATTAATGGATTTAGAAGAAGCGCTTT 400
|||||||||||||||||||||||||||.||||||.|.|||||||||||.|
RBAM_009260__ 351 GGATTATTATGAAGCGGAAGTTTCATTGATGGATCTGGAAGAAGCGCTGT 400
BSNT_01526___ 401 TTAAAGAATTAGAGCTTCCGAATCTCCAACAAAAAGAGCGGGACAATATC 450
||.|.||||||||.||.||||||||.||.|||||.||..|||||||||||
RBAM_009260__ 401 TTCAGGAATTAGAACTGCCGAATCTGCAGCAAAAGGAAAGGGACAATATC 450
BSNT_01526___ 451 ATTCATACAGATATCGAGTTTAATGATATCCGTAAAACAGGGTTAACCGG 500
.|.|||||.|||||||||||.|||||||||||.|||||.|||.|.||.||
RBAM_009260__ 451 GTCCATACCGATATCGAGTTCAATGATATCCGGAAAACCGGGCTGACAGG 500
BSNT_01526___ 501 TAATATTGATAAGAAAAGAACGATGATGTCAGCCTTTAAACGAAACGCAA 550
.|||||.|||||||||||.||||||.||||.||||.||||||||||||.|
RBAM_009260__ 501 GAATATCGATAAGAAAAGGACGATGCTGTCGGCCTATAAACGAAACGCCA 550
BSNT_01526___ 551 TGTCAGGAAAACCGTCGTTCTACCCAATTTATCCGGAGGACCTGAAATAT 600
||.||||.||.||||||||.|||||.|||||||||||.||.||||||||.
RBAM_009260__ 551 TGACAGGCAAGCCGTCGTTTTACCCTATTTATCCGGAAGATCTGAAATAC 600
BSNT_01526___ 601 AAGACGTGGAATGACATCACAAAGCCCGAATCAAAAGCCGTCGTTTTAGC 650
||.||.||||||||..|.||.|||||.|||||.|||||.|||||||||||
RBAM_009260__ 601 AAAACATGGAATGATGTGACGAAGCCGGAATCGAAAGCTGTCGTTTTAGC 650
BSNT_01526___ 651 CATGATGGATACAAGCGGCAGTATGGGGGTTTGGGAAAAATACATGGCCA 700
.|||||||||||||||||....|||||.||.||||||||.||.|||||.|
RBAM_009260__ 651 GATGATGGATACAAGCGGTTCGATGGGCGTATGGGAAAAGTATATGGCGA 700
BSNT_01526___ 701 GAAGCTTCTTTTTCTGGATGACCCGTTTTTTGCGGACAAAATACGAGACT 750
|.|||||||||||.||||||||.||.|||||.||||||||.||.||.||.
RBAM_009260__ 701 GGAGCTTCTTTTTTTGGATGACACGATTTTTACGGACAAAGTATGAAACG 750
BSNT_01526___ 751 GTGGAAATTGAATTTATTGCCCATCATACAGAAGC-AAGAGTGGTCTCGG 799
||.||.||.||||||||.|||||.|||||.||||| ||| ||.||.||||
RBAM_009260__ 751 GTTGATATCGAATTTATCGCCCACCATACGGAAGCGAAG-GTTGTGTCGG 799
BSNT_01526___ 800 AGGAGGATTTTTTCTCAAAGGGAGAAAGCGGCGGAACCATTTGTTCTTCC 849
|.||.|||||||||||.||.||.||.|||||.||.|||||.|||||.|||
RBAM_009260__ 800 AAGAAGATTTTTTCTCGAAAGGCGAGAGCGGGGGCACCATCTGTTCCTCC 849
BSNT_01526___ 850 GTATATCGGAAGTCGCTTGAGCTTATTGATGAAAAGTACAATCCCGCCCG 899
||.||.||||||||.|||||..|.|||||||||||.||..|.||||||||
RBAM_009260__ 850 GTTTACCGGAAGTCTCTTGAATTAATTGATGAAAAATATGACCCCGCCCG 899
BSNT_01526___ 900 CTATAACATTTATCCGTTTCATTTTTCTGACGGTGACAACCTGACATCTG 949
|||.|||||.|||||||||||||||||.|||||.||.||||||||.||.|
RBAM_009260__ 900 CTACAACATCTATCCGTTTCATTTTTCAGACGGAGATAACCTGACTTCGG 949
BSNT_01526___ 950 ATAACGCGCGCTGTGTGAAGCTGGTCAATGATATTATGAAGAAGGCCAAT 999
|||||||.||.||.||.|||||.||||||||.||.|||||.||..|.|||
RBAM_009260__ 950 ATAACGCCCGGTGCGTAAAGCTCGTCAATGACATCATGAAAAAATCGAAT 999
BSNT_01526___ 1000 CTATTCTGTTACGGCGAGGTCAATCAGTACAACAGGCATTCAACGTTAAT 1049
||.|||||||||||.|||||||||||.||.|||||||||||.||..|.||
RBAM_009260__ 1000 CTGTTCTGTTACGGTGAGGTCAATCAATATAACAGGCATTCCACCCTCAT 1049
BSNT_01526___ 1050 GTCTGCATATAAAAATGTAAAAGATGAGAAATTTAAGTACTATATTTTAA 1099
|||.||.|||||||||||.||||||||.||||||||.|||||.||..|.|
RBAM_009260__ 1050 GTCCGCCTATAAAAATGTCAAAGATGATAAATTTAAATACTACATCCTGA 1099
BSNT_01526___ 1100 AACAGAAATCTGATGTTTTTCAGGCTCTAAAGAACTTTTTCAGAAATGAA 1149
||||||||||.||.||.|||||.||.||.||.|.||||||.|.||||||.
RBAM_009260__ 1100 AACAGAAATCAGACGTATTTCAAGCGCTGAAAAGCTTTTTTAAAAATGAG 1149
BSNT_01526___ 1150 GAGTCTGGTGTAAGC----CATC------AATTTTCGTAA 1179
||.||.||||||||| |||| ||| .|||
RBAM_009260__ 1150 GAATCCGGTGTAAGCAAAGCATCGTATGAAAT----ATAA 1185
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