Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01524 and RBAM_009250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence dna-align/BSNT_01524___prkA.1.9828.seq
# -bsequence dna-align/RBAM_009250___prkA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01524___prkA-RBAM_009250___prkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01524___prkA-RBAM_009250___prkA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01524___prkA
# 2: RBAM_009250___prkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1896
# Identity: 1572/1896 (82.9%)
# Similarity: 1572/1896 (82.9%)
# Gaps: 0/1896 ( 0.0%)
# Score: 6564.0
#
#
#=======================================
BSNT_01524___ 1 ATGGATATATTAAAGAAAATTGAACAGTACAGAGAGGAAGAGCAGCGGCT 50
||||||||||||||||||||||||.||||||||||||||||||||||.||
RBAM_009250__ 1 ATGGATATATTAAAGAAAATTGAAAAGTACAGAGAGGAAGAGCAGCGTCT 50
BSNT_01524___ 51 GAAATGGGAAGGAACTTTCGCCGATTATTTGGAGATTATTAAAGAAAATC 100
.|||||||||||.||.|||||.||||||||||||||.||.||||||||||
RBAM_009250__ 51 CAAATGGGAAGGGACGTTCGCTGATTATTTGGAGATCATAAAAGAAAATC 100
BSNT_01524___ 101 CGATGGTCGCGCAATCTGCTCATTCTCGAGTTTTTAATATGATAAAAGAC 150
|..||||||||||.||||||||||||||.|||||||||||||||||||||
RBAM_009250__ 101 CATTGGTCGCGCAGTCTGCTCATTCTCGCGTTTTTAATATGATAAAAGAC 150
BSNT_01524___ 151 AGCGGGATAGAGGAAATTGACGGACGCAAGAAGTACAGTTTTTTTGACCG 200
|||||.||.|||||...||||||....||||..|||||.|||||....||
RBAM_009250__ 151 AGCGGAATCGAGGAGGATGACGGTAAAAAGACATACAGCTTTTTCTCGCG 200
BSNT_01524___ 201 CGAGCTGTTCGGGCTTGAAGAATCTCTGGAGCGTCTTGTGGAAGAGTATT 250
.|||||||||||.|||||.|||||||||||.||.||.|||||.||.||.|
RBAM_009250__ 201 GGAGCTGTTCGGCCTTGAGGAATCTCTGGAACGGCTCGTGGAGGAATACT 250
BSNT_01524___ 251 TTCATCCGGCTGCCAAACGTCTAGATGTCAGAAAGCGGATTCTATTGCTG 300
||||.|||||||||||.||.||.|||||.|||||.||||||.||.|..||
RBAM_009250__ 251 TTCACCCGGCTGCCAAGCGGCTCGATGTAAGAAAACGGATTTTACTATTG 300
BSNT_01524___ 301 ATGGGGCCTGTGAGCGGCGGTAAATCCACGCTGGTCACGATGCTCAAAAA 350
|||||.||.||.||||||||.||.||.||.||.|||||.|||.|.|||||
RBAM_009250__ 301 ATGGGACCCGTCAGCGGCGGAAAGTCAACTCTTGTCACCATGTTGAAAAA 350
BSNT_01524___ 351 AGGTCTCGAAGCGTACACGCTGACAGATAATGGCGCTGTATATGCGATTA 400
|||.||.|||||.|||.|..|||||||.||.||||||||.||.||.||||
RBAM_009250__ 351 AGGGCTTGAAGCCTACTCATTGACAGACAACGGCGCTGTTTACGCCATTA 400
BSNT_01524___ 401 AAGGCTGCCCGATGCACGAGGACCCTCTACATTTAATCCCCCATCATTTA 450
||||||||||||||||.||.||.|||||.|||.|.||.|||||||||.|.
RBAM_009250__ 401 AAGGCTGCCCGATGCATGAAGATCCTCTCCATCTCATTCCCCATCATCTG 450
BSNT_01524___ 451 CGCGATGACTTTTACAGAGAATACGGCATTAGAATAGAAGGAAGTCTTTC 500
|||||.|||||.|||||||||||||||||.|||||.||.||.||.|||||
RBAM_009250__ 451 CGCGACGACTTCTACAGAGAATACGGCATCAGAATTGAGGGCAGCCTTTC 500
BSNT_01524___ 501 TCCTTTAAATGTCATGAGGCTGGAGGAAGAGTACGGAGGAAGAATTGAGG 550
|||..|.|||||||||.||||.||.|||||||||||.||.||||||||||
RBAM_009250__ 501 TCCGCTTAATGTCATGCGGCTTGAAGAAGAGTACGGCGGCAGAATTGAGG 550
BSNT_01524___ 551 ATGTGAAGGTGGAGCGCATCTTCTTTTCAGAAGATAAGCGTACGGGAATT 600
||||.|||||.||.||.||.|||||.||.||.|||||.|||||.|||||.
RBAM_009250__ 551 ATGTAAAGGTTGAACGTATATTCTTCTCGGAGGATAAACGTACCGGAATC 600
BSNT_01524___ 601 GGAACATTCAGTCCCTCTGATCCGAAATCTCAGGATATCGCCGATTTGAC 650
|||||.|||||.||.|||||.||||||||.||||||||||||||.|||||
RBAM_009250__ 601 GGAACCTTCAGCCCGTCTGACCCGAAATCACAGGATATCGCCGACTTGAC 650
BSNT_01524___ 651 GGGGAGTATTGATTTCTCAACAATCGCCGAGTACGGTTCAGAATCAGATC 700
|||||||||||||||.|||||.||.|||||.|||||.|||||||||||||
RBAM_009250__ 651 GGGGAGTATTGATTTTTCAACGATTGCCGAATACGGCTCAGAATCAGATC 700
BSNT_01524___ 701 CGCGCGCTTACCGGTTTGACGGAGAGCTGAATAAAGCGAACCGCGGGATG 750
||||||||||.|||||||||||.||..|.|||||||||||||||||.|||
RBAM_009250__ 701 CGCGCGCTTATCGGTTTGACGGTGAATTAAATAAAGCGAACCGCGGAATG 750
BSNT_01524___ 751 ATGGAGTTTCAGGAGATGCTGAAATGTGATGAGAAATTTCTCTGGCATTT 800
||||||||||||||.|||||||||||.|||||.||||||||.|||||..|
RBAM_009250__ 751 ATGGAGTTTCAGGAAATGCTGAAATGCGATGAAAAATTTCTGTGGCACCT 800
BSNT_01524___ 801 GCTTTCCTTGACACAGGAAGGGAATTTTAAAGCTGGGCGGTTTGCGTTAA 850
.||.||..|.||.||||||||||||||.|||||.||.|||||||||.|.|
RBAM_009250__ 801 TCTGTCACTCACGCAGGAAGGGAATTTCAAAGCCGGACGGTTTGCGCTCA 850
BSNT_01524___ 851 TTTCTGCTGATGAGCTGATTGTGGCTCACACGAATGAAACGGAGTATCGC 900
|.||.||.||.||..||.||||.||.||.|||||.|||||||||||.|||
RBAM_009250__ 851 TCTCAGCCGACGAATTGGTTGTTGCGCATACGAACGAAACGGAGTACCGC 900
BSNT_01524___ 901 TCATTTATTTCTAATAAGAAGAATGAAGCCCTGCACTCGAGAATCATCGT 950
||.||||||.|.||||||||.|||||||||||.|||||.||.||||||||
RBAM_009250__ 901 TCGTTTATTGCCAATAAGAAAAATGAAGCCCTTCACTCCAGGATCATCGT 950
BSNT_01524___ 951 GATGCCGGTTCCTTATAATTTAAAAGTGTCAGAGGAAGAGAGAATTTATG 1000
||||||.|||||||||||||||||.||||||||||||||..|.|||||||
RBAM_009250__ 951 GATGCCTGTTCCTTATAATTTAAAGGTGTCAGAGGAAGAACGGATTTATG 1000
BSNT_01524___ 1001 AAAAAATGATCGCTGAGAGCGATGTGGCGGATGTTCATATTGCCCCGCAT 1050
||||||||||..||||.||.|||||..|.||.||.||.||.|||||.|||
RBAM_009250__ 1001 AAAAAATGATTTCTGAAAGTGATGTTTCTGACGTACACATCGCCCCCCAT 1050
BSNT_01524___ 1051 ACGTTGAAGGTCGCCGCGATGTTCTCAATCCTTACCCGGTTAAAGGAACC 1100
||.||.||.||.|||||||||||.||.||..|.|||.||.|.||||||||
RBAM_009250__ 1051 ACATTAAAAGTGGCCGCGATGTTTTCTATTTTGACCAGGCTGAAGGAACC 1100
BSNT_01524___ 1101 GAAGCGGTCGGATATTGATCTGGTCAAGAAAATGAGACTGTATGATGGAG 1150
|||.||.||.|||||||||||.|||||.||||||||.||.|||||.||||
RBAM_009250__ 1101 GAACCGCTCTGATATTGATCTCGTCAAAAAAATGAGGCTCTATGACGGAG 1150
BSNT_01524___ 1151 AAAGTGTGGAAGGATATAATTCTGTCGACGTTGAGGATATGAAAAAAGAA 1200
||||.||.|||||.||.|||||.||.||..|.|||||||||||.||.|||
RBAM_009250__ 1151 AAAGCGTTGAAGGTTACAATTCCGTTGATCTGGAGGATATGAAGAAGGAA 1200
BSNT_01524___ 1201 TATAATGATGAAGGTATGAGCGGCATTGATCCGCGGTACGTGATCAACCG 1250
|...||||||||||.||||||||.|||||.|||||.||.||.||||||||
RBAM_009250__ 1201 TTCCATGATGAAGGAATGAGCGGAATTGACCCGCGCTATGTCATCAACCG 1250
BSNT_01524___ 1251 GATATCTTCAACGATTATCAGAAAGAATATGGAATCGATTAATTCTCTCG 1300
.||.||.|||||.|||||||||||.||||||||||||||.|||||.||.|
RBAM_009250__ 1251 CATTTCCTCAACAATTATCAGAAAAAATATGGAATCGATCAATTCGCTTG 1300
BSNT_01524___ 1301 ATGTCCTTCGTTCCTTAAAAGAAGGTCTTGATCAGCACCCATCAATTTCA 1350
|.||.||.|||||||||||||||||.|||||.|||||.||.||.||.||.
RBAM_009250__ 1301 ACGTGCTGCGTTCCTTAAAAGAAGGACTTGACCAGCATCCGTCGATCTCC 1350
BSNT_01524___ 1351 AGCGAGGACAGGGAGCGGTATTTGAATTTTATTTCTGCCGCCCGCAAGGA 1400
..||||||||..|||||||||.|||||||||||||.||||||.|.||.||
RBAM_009250__ 1351 GCCGAGGACAAAGAGCGGTATATGAATTTTATTTCCGCCGCCAGGAAAGA 1400
BSNT_01524___ 1401 ATATGACGACATTGCGAAAAAGGAAGTTCAAAAAGCGTTTGTGTATTCGT 1450
.||.||.|||||.||.|||||.|||||.||.||.|||||.||.|||||.|
RBAM_009250__ 1401 GTACGATGACATCGCTAAAAAAGAAGTGCAGAAGGCGTTCGTCTATTCAT 1450
BSNT_01524___ 1451 ATGAAGAATCAGCAAAAACACTTATGGACAATTACCTCGATAACGTAGAG 1500
||||||||||.||.|||||.||.|||||||||||..|.|||||.||.||.
RBAM_009250__ 1451 ATGAAGAATCCGCTAAAACTCTCATGGACAATTATTTAGATAATGTGGAA 1500
BSNT_01524___ 1501 GCTTATTGCAATAAAAACAAGCTTCGTGATCCTTTGACAGGAGAGGAAAT 1550
||.||.|||||||||||.|||||.||.||.||..||||.||.||.|||||
RBAM_009250__ 1501 GCGTACTGCAATAAAAATAAGCTCCGCGACCCGCTGACGGGTGAAGAAAT 1550
BSNT_01524___ 1551 GAACCCTGACGAAAAGCTGATGAGATCCATCGAAGAGCAGATCGGCATTT 1600
|||.|||||||||||.||||||||||||||.|||||||||||||||||||
RBAM_009250__ 1551 GAATCCTGACGAAAAACTGATGAGATCCATTGAAGAGCAGATCGGCATTT 1600
BSNT_01524___ 1601 CGGAAAACGCCAAAAAAGCGTTCCGCGAAGAAATTTTAATCCGCATCTCA 1650
|.||||||||.|||||||||||||||||||||||||||||||||||.||.
RBAM_009250__ 1601 CAGAAAACGCGAAAAAAGCGTTCCGCGAAGAAATTTTAATCCGCATATCC 1650
BSNT_01524___ 1651 GCCTATGCGAGAAAAGGCAAGCGGTTTGATTACAATTCCCATGAAAGACT 1700
||||||||.||||||||.||.||.|||||.||.|||||.||.||||||||
RBAM_009250__ 1651 GCCTATGCAAGAAAAGGAAAACGCTTTGACTATAATTCGCACGAAAGACT 1700
BSNT_01524___ 1701 GCGTGAAGCTATTCAGAAAAAGCTGTTTGCTGATCTGAAGGATGTCGTTA 1750
.||.|||||.|||||||||||||||||.||.||..|.||.|||||.||.|
RBAM_009250__ 1701 CCGCGAAGCGATTCAGAAAAAGCTGTTCGCAGACTTAAAAGATGTGGTGA 1750
BSNT_01524___ 1751 AAATTACGACCTCTACAAAAACGCCGGATGAACAGCAGCTGAAAAAGGTA 1800
|||||||||||||.||.||||||||||||||.||||||||.||||||||.
RBAM_009250__ 1751 AAATTACGACCTCAACCAAAACGCCGGATGAGCAGCAGCTTAAAAAGGTC 1800
BSNT_01524___ 1801 AATGAAGTCGTGGCCCGTTTAATTGATGAGCACGGCTACAACTCGACGAG 1850
|||||.||.|||||..|.|||||.|||||.||||||||.||.|||||.||
RBAM_009250__ 1801 AATGAGGTAGTGGCAAGGTTAATAGATGAACACGGCTATAATTCGACTAG 1850
BSNT_01524___ 1851 CGCCAATGAGCTGCTGAAATATGTCGGCAGCCTGCTGAACCGATAA 1896
|||.|||||.||||||||.||||||||.|||.||.|.|||||.|.|
RBAM_009250__ 1851 CGCTAATGAACTGCTGAAGTATGTCGGAAGCTTGTTAAACCGCTGA 1896
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