Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01514 and RBAM_009190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01514.1.9828.seq
# -bsequence dna-align/RBAM_009190___yhbA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01514-RBAM_009190___yhbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01514-RBAM_009190___yhbA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01514
# 2: RBAM_009190___yhbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1173
# Identity: 933/1173 (79.5%)
# Similarity: 933/1173 (79.5%)
# Gaps: 15/1173 ( 1.3%)
# Score: 3724.0
#
#
#=======================================
BSNT_01514 1 ---------ATGAACGTTTATCAGCTCAAAGAAGAATTAATTGAATACGC 41
|||||..||.||.|.||.|||||.||||||||.||||||||
RBAM_009190__ 1 GTGCAAAAAATGAATATTCATAAACTGAAAGAGGAATTAATCGAATACGC 50
BSNT_01514 42 GAAAAGCATTGGCGTGGACAAGATTGGTTTTACGACCGCTGATACTTTTG 91
.||||||||.||.||.|||||.||.||.||||||||.||||||||.||.|
RBAM_009190__ 51 CAAAAGCATAGGAGTCGACAAAATCGGGTTTACGACGGCTGATACGTTCG 100
BSNT_01514 92 ACAGTTTAAAAGACCGTTTGATTCTTCAAGAATCACTCGGCTATCTCTCC 141
|||||.|....|||||..||||||||||.|||||||||||||||.|.|||
RBAM_009190__ 101 ACAGTCTGCGGGACCGGCTGATTCTTCAGGAATCACTCGGCTATTTATCC 150
BSNT_01514 142 GGCTTTGAAGAGCCGGATATCGAAAAAAGGGTGACGCCGAAGCTT--CTT 189
||.|||||||||||||||||.||||||.||||.||.||| .||| |||
RBAM_009190__ 151 GGGTTTGAAGAGCCGGATATTGAAAAACGGGTTACACCG--TCTTTGCTT 198
BSNT_01514 190 TTGCCGAAAGCGAAATCAATAGTGGCAATTGCTCTCGCATATCCTTCCAG 239
.|.||||||||.||||||||.||.||.||.||.||.||.||||||||||.
RBAM_009190__ 199 CTCCCGAAAGCCAAATCAATCGTCGCCATCGCCCTTGCTTATCCTTCCAA 248
BSNT_01514 240 AATGAAGGATGCGCCGAGAAGCACGA-GAACTGAGCGCAGGGGCATTTTT 288
||||||.|||||||||||.||||||| |.|| |.|||..|.|||||||||
RBAM_009190__ 249 AATGAAAGATGCGCCGAGGAGCACGAGGGAC-GGGCGGCGCGGCATTTTT 297
BSNT_01514 289 TGCAGAGCCTCCTGGGGAAAAGACTATCATGATGTGCTGAGGGAAAAGCT 338
||||||||.||||||||.||.||.||||||||.|||||||||||||||||
RBAM_009190__ 298 TGCAGAGCTTCCTGGGGGAAGGATTATCATGACGTGCTGAGGGAAAAGCT 347
BSNT_01514 339 TGATCTGCTGGAGGATTTTCTAAAAAGCAAGCATGAGGATATCAGAACGA 388
|||||||||||||.|||||||..|||||||.||||||||||||.|.||||
RBAM_009190__ 348 TGATCTGCTGGAGAATTTTCTCCAAAGCAAACATGAGGATATCCGCACGA 397
BSNT_01514 389 AGTCAATGGTTGATACAGGTGAATTGTCTGATCGCGCCGTTGCGGAACGT 438
||||||||||.||||||||.||||||||.||..|.|||||.||.|||||.
RBAM_009190__ 398 AGTCAATGGTGGATACAGGAGAATTGTCCGACAGGGCCGTGGCTGAACGG 447
BSNT_01514 439 GCCGGAATTGGATTCAGTGCGAAAAACTGTATGATCACAACACCCGAGTA 488
||.|||||.||.|||||.||.||||||||.||||||||.||.||.||.||
RBAM_009190__ 448 GCGGGAATCGGCTTCAGCGCCAAAAACTGCATGATCACCACGCCTGAATA 497
BSNT_01514 489 TGGCTCTTATGTGTATTTGGCGGAAATGATCACAAATATCCCTTTTGAGC 538
.||||||||.||.|||.||||.|||||||||||.|||.|.||.|||||.|
RBAM_009190__ 498 CGGCTCTTACGTCTATCTGGCTGAAATGATCACCAATCTGCCCTTTGAAC 547
BSNT_01514 539 CTGATGTGCCGATTGAAGATATGTGCGGGTCCTGCACGAAATGCTTGGAC 588
|.||||||||||||||||||||||||||..|.|||||.|||||.||.|||
RBAM_009190__ 548 CGGATGTGCCGATTGAAGATATGTGCGGTACGTGCACAAAATGTTTAGAC 597
BSNT_01514 589 GCCTGTCCGACGGGAGCACTGGTTAATCCCGGGCAGCTTAATGCGCAGCG 638
||.||||||||.||.||.||.||.||||||||.||||||||.||.|||||
RBAM_009190__ 598 GCGTGTCCGACCGGCGCGCTCGTCAATCCCGGACAGCTTAACGCCCAGCG 647
BSNT_01514 639 CTGCATCTCTTTTCTGACCCAGACAAAAGGATTTTTACCTGATGAATTCC 688
|||.||.||.||.||||||||||||||.||||||||.||.|||||.||||
RBAM_009190__ 648 CTGTATTTCGTTCCTGACCCAGACAAAGGGATTTTTGCCGGATGAGTTCC 697
BSNT_01514 689 GGACAAAAATCGGAAACCGCCTGTACGGGTGCGATACGTGCCAAACGGTA 738
|.||.||||||||||||||.|||||.||.||.||.||||||||.|||||.
RBAM_009190__ 698 GCACGAAAATCGGAAACCGTCTGTATGGCTGTGACACGTGCCAGACGGTC 747
BSNT_01514 739 TGCCCTCTCAATAAAGGGAAGGATTTTCATCTTCATCCGGAAATGGAGCC 788
||.||..|.|||||||||||.||||||||||||||||||.|.||||||||
RBAM_009190__ 748 TGTCCGATTAATAAAGGGAAAGATTTTCATCTTCATCCGCAGATGGAGCC 797
BSNT_01514 789 TGATCCTGAGATTGCCAAACCGTTATTGAAGCCGCTTTTGACCATCAGCA 838
||||||.||.||.||.||.|||.|.||.|||||||||||||||||.||||
RBAM_009190__ 798 TGATCCGGAAATCGCAAAGCCGCTGTTAAAGCCGCTTTTGACCATAAGCA 847
BSNT_01514 839 ATCGGGAATTTAAGGAGAAATTCGGGCATGTCTCAGGTTCTTGGCGCGGA 888
|.||.|||||.||.||.||||||||.|||||.||.||.||.||||||||.
RBAM_009190__ 848 ACCGCGAATTCAAAGAAAAATTCGGACATGTATCGGGATCATGGCGCGGC 897
BSNT_01514 889 AAAAAACCGATTCAGCGAAACGCCATTCTCGCGCTTGCGCATTTTAAGGA 938
||.||.|||||.|||||.||.||.|||.|.||..|.||.||||||||.||
RBAM_009190__ 898 AAGAAGCCGATACAGCGGAATGCGATTTTAGCTTTGGCTCATTTTAAAGA 947
BSNT_01514 939 TGCTTCCGCACTGCCTGAATTGACGGAACTGATGCACAAGGATCCGCGTC 988
|||.||..|.||.||.|||||.||||...||||||||.|.||||||||.|
RBAM_009190__ 948 TGCCTCGTCTCTTCCGGAATTAACGGCCTTGATGCACCAAGATCCGCGCC 997
BSNT_01514 989 CTGTCATCAGGGGGACAGCCGCATGGGCAATCGGAAAAATCGGAGACCCC 1038
|.||.|||||.|||||.|||||.|||||.|||||.||||||||.||.||.
RBAM_009190__ 998 CCGTTATCAGAGGGACGGCCGCCTGGGCCATCGGGAAAATCGGTGATCCT 1047
BSNT_01514 1039 GCATACGCGGAAGAGCTTGAAAAAGCGCTGGAAAAAGAGAAGGATGAAGA 1088
|..||.||||..||..|.|||||||||||..||||.|||.|||||||.||
RBAM_009190__ 1048 GATTATGCGGGGGAATTAGAAAAAGCGCTTCAAAAGGAGCAGGATGAGGA 1097
BSNT_01514 1089 GGCAAAGCTGGAAATTGAAAAAGGAATTGATTTGCTAAAAGCTTCAGGCA 1138
.||.|..|.||||||||||||.|||.|.||..||.||...|.|||.|..|
RBAM_009190__ 1098 AGCTATACGGGAAATTGAAAAGGGACTGGAGCTGTTATCGGTTTCTGATA 1147
BSNT_01514 1139 TGACTAAACGAGGCTTGTCCTGA 1161
.|||||||...|||..|||||||
RBAM_009190__ 1148 AGACTAAAACCGGCCGGTCCTGA 1170
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