Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01514 and RBAM_009190

See Amino acid alignment / Visit BSNT_01514 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence dna-align/BSNT_01514.1.9828.seq
#    -bsequence dna-align/RBAM_009190___yhbA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01514-RBAM_009190___yhbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01514-RBAM_009190___yhbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01514
# 2: RBAM_009190___yhbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1173
# Identity:     933/1173 (79.5%)
# Similarity:   933/1173 (79.5%)
# Gaps:          15/1173 ( 1.3%)
# Score: 3724.0
# 
#
#=======================================

BSNT_01514         1 ---------ATGAACGTTTATCAGCTCAAAGAAGAATTAATTGAATACGC     41
                              |||||..||.||.|.||.|||||.||||||||.||||||||
RBAM_009190__      1 GTGCAAAAAATGAATATTCATAAACTGAAAGAGGAATTAATCGAATACGC     50

BSNT_01514        42 GAAAAGCATTGGCGTGGACAAGATTGGTTTTACGACCGCTGATACTTTTG     91
                     .||||||||.||.||.|||||.||.||.||||||||.||||||||.||.|
RBAM_009190__     51 CAAAAGCATAGGAGTCGACAAAATCGGGTTTACGACGGCTGATACGTTCG    100

BSNT_01514        92 ACAGTTTAAAAGACCGTTTGATTCTTCAAGAATCACTCGGCTATCTCTCC    141
                     |||||.|....|||||..||||||||||.|||||||||||||||.|.|||
RBAM_009190__    101 ACAGTCTGCGGGACCGGCTGATTCTTCAGGAATCACTCGGCTATTTATCC    150

BSNT_01514       142 GGCTTTGAAGAGCCGGATATCGAAAAAAGGGTGACGCCGAAGCTT--CTT    189
                     ||.|||||||||||||||||.||||||.||||.||.|||  .|||  |||
RBAM_009190__    151 GGGTTTGAAGAGCCGGATATTGAAAAACGGGTTACACCG--TCTTTGCTT    198

BSNT_01514       190 TTGCCGAAAGCGAAATCAATAGTGGCAATTGCTCTCGCATATCCTTCCAG    239
                     .|.||||||||.||||||||.||.||.||.||.||.||.||||||||||.
RBAM_009190__    199 CTCCCGAAAGCCAAATCAATCGTCGCCATCGCCCTTGCTTATCCTTCCAA    248

BSNT_01514       240 AATGAAGGATGCGCCGAGAAGCACGA-GAACTGAGCGCAGGGGCATTTTT    288
                     ||||||.|||||||||||.||||||| |.|| |.|||..|.|||||||||
RBAM_009190__    249 AATGAAAGATGCGCCGAGGAGCACGAGGGAC-GGGCGGCGCGGCATTTTT    297

BSNT_01514       289 TGCAGAGCCTCCTGGGGAAAAGACTATCATGATGTGCTGAGGGAAAAGCT    338
                     ||||||||.||||||||.||.||.||||||||.|||||||||||||||||
RBAM_009190__    298 TGCAGAGCTTCCTGGGGGAAGGATTATCATGACGTGCTGAGGGAAAAGCT    347

BSNT_01514       339 TGATCTGCTGGAGGATTTTCTAAAAAGCAAGCATGAGGATATCAGAACGA    388
                     |||||||||||||.|||||||..|||||||.||||||||||||.|.||||
RBAM_009190__    348 TGATCTGCTGGAGAATTTTCTCCAAAGCAAACATGAGGATATCCGCACGA    397

BSNT_01514       389 AGTCAATGGTTGATACAGGTGAATTGTCTGATCGCGCCGTTGCGGAACGT    438
                     ||||||||||.||||||||.||||||||.||..|.|||||.||.|||||.
RBAM_009190__    398 AGTCAATGGTGGATACAGGAGAATTGTCCGACAGGGCCGTGGCTGAACGG    447

BSNT_01514       439 GCCGGAATTGGATTCAGTGCGAAAAACTGTATGATCACAACACCCGAGTA    488
                     ||.|||||.||.|||||.||.||||||||.||||||||.||.||.||.||
RBAM_009190__    448 GCGGGAATCGGCTTCAGCGCCAAAAACTGCATGATCACCACGCCTGAATA    497

BSNT_01514       489 TGGCTCTTATGTGTATTTGGCGGAAATGATCACAAATATCCCTTTTGAGC    538
                     .||||||||.||.|||.||||.|||||||||||.|||.|.||.|||||.|
RBAM_009190__    498 CGGCTCTTACGTCTATCTGGCTGAAATGATCACCAATCTGCCCTTTGAAC    547

BSNT_01514       539 CTGATGTGCCGATTGAAGATATGTGCGGGTCCTGCACGAAATGCTTGGAC    588
                     |.||||||||||||||||||||||||||..|.|||||.|||||.||.|||
RBAM_009190__    548 CGGATGTGCCGATTGAAGATATGTGCGGTACGTGCACAAAATGTTTAGAC    597

BSNT_01514       589 GCCTGTCCGACGGGAGCACTGGTTAATCCCGGGCAGCTTAATGCGCAGCG    638
                     ||.||||||||.||.||.||.||.||||||||.||||||||.||.|||||
RBAM_009190__    598 GCGTGTCCGACCGGCGCGCTCGTCAATCCCGGACAGCTTAACGCCCAGCG    647

BSNT_01514       639 CTGCATCTCTTTTCTGACCCAGACAAAAGGATTTTTACCTGATGAATTCC    688
                     |||.||.||.||.||||||||||||||.||||||||.||.|||||.||||
RBAM_009190__    648 CTGTATTTCGTTCCTGACCCAGACAAAGGGATTTTTGCCGGATGAGTTCC    697

BSNT_01514       689 GGACAAAAATCGGAAACCGCCTGTACGGGTGCGATACGTGCCAAACGGTA    738
                     |.||.||||||||||||||.|||||.||.||.||.||||||||.|||||.
RBAM_009190__    698 GCACGAAAATCGGAAACCGTCTGTATGGCTGTGACACGTGCCAGACGGTC    747

BSNT_01514       739 TGCCCTCTCAATAAAGGGAAGGATTTTCATCTTCATCCGGAAATGGAGCC    788
                     ||.||..|.|||||||||||.||||||||||||||||||.|.||||||||
RBAM_009190__    748 TGTCCGATTAATAAAGGGAAAGATTTTCATCTTCATCCGCAGATGGAGCC    797

BSNT_01514       789 TGATCCTGAGATTGCCAAACCGTTATTGAAGCCGCTTTTGACCATCAGCA    838
                     ||||||.||.||.||.||.|||.|.||.|||||||||||||||||.||||
RBAM_009190__    798 TGATCCGGAAATCGCAAAGCCGCTGTTAAAGCCGCTTTTGACCATAAGCA    847

BSNT_01514       839 ATCGGGAATTTAAGGAGAAATTCGGGCATGTCTCAGGTTCTTGGCGCGGA    888
                     |.||.|||||.||.||.||||||||.|||||.||.||.||.||||||||.
RBAM_009190__    848 ACCGCGAATTCAAAGAAAAATTCGGACATGTATCGGGATCATGGCGCGGC    897

BSNT_01514       889 AAAAAACCGATTCAGCGAAACGCCATTCTCGCGCTTGCGCATTTTAAGGA    938
                     ||.||.|||||.|||||.||.||.|||.|.||..|.||.||||||||.||
RBAM_009190__    898 AAGAAGCCGATACAGCGGAATGCGATTTTAGCTTTGGCTCATTTTAAAGA    947

BSNT_01514       939 TGCTTCCGCACTGCCTGAATTGACGGAACTGATGCACAAGGATCCGCGTC    988
                     |||.||..|.||.||.|||||.||||...||||||||.|.||||||||.|
RBAM_009190__    948 TGCCTCGTCTCTTCCGGAATTAACGGCCTTGATGCACCAAGATCCGCGCC    997

BSNT_01514       989 CTGTCATCAGGGGGACAGCCGCATGGGCAATCGGAAAAATCGGAGACCCC   1038
                     |.||.|||||.|||||.|||||.|||||.|||||.||||||||.||.||.
RBAM_009190__    998 CCGTTATCAGAGGGACGGCCGCCTGGGCCATCGGGAAAATCGGTGATCCT   1047

BSNT_01514      1039 GCATACGCGGAAGAGCTTGAAAAAGCGCTGGAAAAAGAGAAGGATGAAGA   1088
                     |..||.||||..||..|.|||||||||||..||||.|||.|||||||.||
RBAM_009190__   1048 GATTATGCGGGGGAATTAGAAAAAGCGCTTCAAAAGGAGCAGGATGAGGA   1097

BSNT_01514      1089 GGCAAAGCTGGAAATTGAAAAAGGAATTGATTTGCTAAAAGCTTCAGGCA   1138
                     .||.|..|.||||||||||||.|||.|.||..||.||...|.|||.|..|
RBAM_009190__   1098 AGCTATACGGGAAATTGAAAAGGGACTGGAGCTGTTATCGGTTTCTGATA   1147

BSNT_01514      1139 TGACTAAACGAGGCTTGTCCTGA   1161
                     .|||||||...|||..|||||||
RBAM_009190__   1148 AGACTAAAACCGGCCGGTCCTGA   1170


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