Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01513 and RBAM_009180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01513___yhzB.1.9828.seq
# -bsequence dna-align/RBAM_009180___yhzB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01513___yhzB-RBAM_009180___yhzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01513___yhzB-RBAM_009180___yhzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01513___yhzB
# 2: RBAM_009180___yhzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 656
# Identity: 445/656 (67.8%)
# Similarity: 445/656 (67.8%)
# Gaps: 64/656 ( 9.8%)
# Score: 1377.0
#
#
#=======================================
BSNT_01513___ 1 GTGAATATCAAACTTGATTCTGTTATTACTGAACGTGCGGCCGGCTTACA 50
.||||.||||...|.|||.|..|||||.|||||||.|.|.|.||..|..|
RBAM_009180__ 1 TTGAACATCAGTTTAGATCCACTTATTGCTGAACGGGTGCCGGGGATCAA 50
BSNT_01513___ 51 TGCAGCTGCTGTCATTTATGAGAATATCGAAGTCGG--CTCCTCACCGCA 98
.||.||.||.|||.|.|||||..|.||||||||||| ||.|| |||||
RBAM_009180__ 51 AGCGGCAGCCGTCTTATATGAACAGATCGAAGTCGGGCCTGCT--CCGCA 98
BSNT_01513___ 99 AATGCTGAAAGGCAGACTCCGCCTGTTTCAAGAATCCTTGTTT--TTCGA 146
|||||||||||||.|.|||||..|.||||||||||| |.||| ||.||
RBAM_009180__ 99 AATGCTGAAAGGCCGCCTCCGTTTATTTCAAGAATC--TCTTTACTTTGA 146
BSNT_01513___ 147 CTATGCGGACGGCGGTATATCCGATGA--ATCC-TTCGTCAAGGAATGGC 193
.|||||.|||||||||||| ||||| |.|| ||.||.||.||.|||
RBAM_009180__ 147 TTATGCTGACGGCGGTATA---GATGAGCAGCCTTTTGTAAAAGAGTGG- 192
BSNT_01513___ 194 AGGAACTC-TTTA----AACAGCTTA-ACCCTTCATTTGAGGGAGAAACA 237
.|.| |.|| |||||||.| .|||..|.|||.| |||.|||.|
RBAM_009180__ 193 ----GCGCGTATAACGGAACAGCTCAGTCCCGCCTTTTCA-GGACAAAAA 237
BSNT_01513___ 238 ACCCCAATGGAGGACATGCT-GGTCCCGATA--TCCAAGGAACAATTCAT 284
||.||.||||||...||||| || ||||| |||..|||||.||||||
RBAM_009180__ 238 ACGCCGATGGAGCTTATGCTCGG---CGATATTTCCCGGGAACGATTCAT 284
BSNT_01513___ 285 GGAAAGTATAGACTCGGCCCATGACACAATCGATTTTTTCGCATTAAAAT 334
.||||||.|..|.||.||||||||.||.||...|||||||.|.||.||||
RBAM_009180__ 285 TGAAAGTGTGAATTCAGCCCATGATACCATACTTTTTTTCTCCTTGAAAT 334
BSNT_01513___ 335 ATTCTCTGCCTATTATGATTTATGATGCCG--GAAAGCTTCATGAGCCGG 382
||||..|||||||.|||...|||||.|||| |||| |..||||.||
RBAM_009180__ 335 ATTCATTGCCTATCATGGCGTATGACGCCGCAGAAA--TAGATGAACC-- 380
BSNT_01513___ 383 TCCGGATCTCA------TTGGGAGAAAAAGAAAACATACTGCTTTTCTCT 426
.||.||| .|.|||||||||||||.|.|||||...|||||.
RBAM_009180__ 381 ----CATTTCAATTACGATCGGAGAAAAAGAAAGCGTACTGTCCTTCTCC 426
BSNT_01513___ 427 GATGAAAACGGCATTTTTGGCGATTTCA------AAAACAACGTCAACCA 470
|......|||||.||||.|||||.|||| |.|.||| .|.||.
RBAM_009180__ 427 GGCCCGGACGGCGTTTTCGGCGACTTCACCGGACATATCAA---TACCCG 473
BSNT_01513___ 471 CTATCCCGTTTCAAACGAGACTAAGAATATGCTGCAAATCATTTTTTTCC 520
| ||.||..|...||..||.|||||.||||||||..|.||.|||||||
RBAM_009180__ 474 C---CCGGTCACGCCCGGCACAAAGAAAATGCTGCAGCTGATCTTTTTCC 520
BSNT_01513___ 521 CGCCATCGATTGA--GAAAAGCAGCGCTGTTAACCTCTTATCATCATTAA 568
||||.||..||.| .|.|.||.||| |.|.|.||..|||||||.||||
RBAM_009180__ 521 CGCCTTCATTTCATGCAGACGCGGCG--GATGAGCTGCTATCATCCTTAA 568
BSNT_01513___ 569 CGAAAATGTTTGAACAAATTCACGGCGGCACCTATACAGTACATTGGCTT 618
|.|||||||||||||||||||||||.|||||..||||.||...|||||||
RBAM_009180__ 569 CAAAAATGTTTGAACAAATTCACGGAGGCACGCATACCGTCTCTTGGCTT 618
BSNT_01513___ 619 ACGTAA 624
.|.|||
RBAM_009180__ 619 TCATAA 624
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