Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01513 and RBAM_009180

See Amino acid alignment / Visit BSNT_01513 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence dna-align/BSNT_01513___yhzB.1.9828.seq
#    -bsequence dna-align/RBAM_009180___yhzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01513___yhzB-RBAM_009180___yhzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01513___yhzB-RBAM_009180___yhzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01513___yhzB
# 2: RBAM_009180___yhzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 656
# Identity:     445/656 (67.8%)
# Similarity:   445/656 (67.8%)
# Gaps:          64/656 ( 9.8%)
# Score: 1377.0
# 
#
#=======================================

BSNT_01513___      1 GTGAATATCAAACTTGATTCTGTTATTACTGAACGTGCGGCCGGCTTACA     50
                     .||||.||||...|.|||.|..|||||.|||||||.|.|.|.||..|..|
RBAM_009180__      1 TTGAACATCAGTTTAGATCCACTTATTGCTGAACGGGTGCCGGGGATCAA     50

BSNT_01513___     51 TGCAGCTGCTGTCATTTATGAGAATATCGAAGTCGG--CTCCTCACCGCA     98
                     .||.||.||.|||.|.|||||..|.|||||||||||  ||.||  |||||
RBAM_009180__     51 AGCGGCAGCCGTCTTATATGAACAGATCGAAGTCGGGCCTGCT--CCGCA     98

BSNT_01513___     99 AATGCTGAAAGGCAGACTCCGCCTGTTTCAAGAATCCTTGTTT--TTCGA    146
                     |||||||||||||.|.|||||..|.|||||||||||  |.|||  ||.||
RBAM_009180__     99 AATGCTGAAAGGCCGCCTCCGTTTATTTCAAGAATC--TCTTTACTTTGA    146

BSNT_01513___    147 CTATGCGGACGGCGGTATATCCGATGA--ATCC-TTCGTCAAGGAATGGC    193
                     .|||||.||||||||||||   |||||  |.|| ||.||.||.||.||| 
RBAM_009180__    147 TTATGCTGACGGCGGTATA---GATGAGCAGCCTTTTGTAAAAGAGTGG-    192

BSNT_01513___    194 AGGAACTC-TTTA----AACAGCTTA-ACCCTTCATTTGAGGGAGAAACA    237
                         .|.| |.||    |||||||.| .|||..|.|||.| |||.|||.|
RBAM_009180__    193 ----GCGCGTATAACGGAACAGCTCAGTCCCGCCTTTTCA-GGACAAAAA    237

BSNT_01513___    238 ACCCCAATGGAGGACATGCT-GGTCCCGATA--TCCAAGGAACAATTCAT    284
                     ||.||.||||||...||||| ||   |||||  |||..|||||.||||||
RBAM_009180__    238 ACGCCGATGGAGCTTATGCTCGG---CGATATTTCCCGGGAACGATTCAT    284

BSNT_01513___    285 GGAAAGTATAGACTCGGCCCATGACACAATCGATTTTTTCGCATTAAAAT    334
                     .||||||.|..|.||.||||||||.||.||...|||||||.|.||.||||
RBAM_009180__    285 TGAAAGTGTGAATTCAGCCCATGATACCATACTTTTTTTCTCCTTGAAAT    334

BSNT_01513___    335 ATTCTCTGCCTATTATGATTTATGATGCCG--GAAAGCTTCATGAGCCGG    382
                     ||||..|||||||.|||...|||||.||||  ||||  |..||||.||  
RBAM_009180__    335 ATTCATTGCCTATCATGGCGTATGACGCCGCAGAAA--TAGATGAACC--    380

BSNT_01513___    383 TCCGGATCTCA------TTGGGAGAAAAAGAAAACATACTGCTTTTCTCT    426
                         .||.|||      .|.|||||||||||||.|.|||||...|||||.
RBAM_009180__    381 ----CATTTCAATTACGATCGGAGAAAAAGAAAGCGTACTGTCCTTCTCC    426

BSNT_01513___    427 GATGAAAACGGCATTTTTGGCGATTTCA------AAAACAACGTCAACCA    470
                     |......|||||.||||.|||||.||||      |.|.|||   .|.||.
RBAM_009180__    427 GGCCCGGACGGCGTTTTCGGCGACTTCACCGGACATATCAA---TACCCG    473

BSNT_01513___    471 CTATCCCGTTTCAAACGAGACTAAGAATATGCTGCAAATCATTTTTTTCC    520
                     |   ||.||..|...||..||.|||||.||||||||..|.||.|||||||
RBAM_009180__    474 C---CCGGTCACGCCCGGCACAAAGAAAATGCTGCAGCTGATCTTTTTCC    520

BSNT_01513___    521 CGCCATCGATTGA--GAAAAGCAGCGCTGTTAACCTCTTATCATCATTAA    568
                     ||||.||..||.|  .|.|.||.|||  |.|.|.||..|||||||.||||
RBAM_009180__    521 CGCCTTCATTTCATGCAGACGCGGCG--GATGAGCTGCTATCATCCTTAA    568

BSNT_01513___    569 CGAAAATGTTTGAACAAATTCACGGCGGCACCTATACAGTACATTGGCTT    618
                     |.|||||||||||||||||||||||.|||||..||||.||...|||||||
RBAM_009180__    569 CAAAAATGTTTGAACAAATTCACGGAGGCACGCATACCGTCTCTTGGCTT    618

BSNT_01513___    619 ACGTAA    624
                     .|.|||
RBAM_009180__    619 TCATAA    624


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