Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01508 and RBAM_009150

See Amino acid alignment / Visit BSNT_01508 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence dna-align/BSNT_01508___rpsN.1.9828.seq
#    -bsequence dna-align/RBAM_009150___rpsN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01508___rpsN-RBAM_009150___rpsN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01508___rpsN-RBAM_009150___rpsN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01508___rpsN
# 2: RBAM_009150___rpsN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     215/270 (79.6%)
# Similarity:   215/270 (79.6%)
# Gaps:           0/270 ( 0.0%)
# Score: 855.0
# 
#
#=======================================

BSNT_01508___      1 TTGGCTAAAAAATCAAAAGTGGCAAAAGAGTTAAAACGCCAACAGCTTGT     50
                     .||||.|||||||||||||||...||||||.|.||.||.||..|||||||
RBAM_009150__      1 ATGGCAAAAAAATCAAAAGTGATCAAAGAGCTCAAGCGGCAGAAGCTTGT     50

BSNT_01508___     51 TGAGCAATACGCTGGTATTAGACGCGAGTTGAAGGAAAAAGGAGATTACG    100
                     |||.|||||.||.|..||..||.|.||.||.||||.|||||||||.|..|
RBAM_009150__     51 TGAACAATATGCGGACATCCGAAGAGAATTAAAGGCAAAAGGAGACTGGG    100

BSNT_01508___    101 AGGCACTCAGCAAGCTGCCAAGAGATTCAGCACCGGGAAGGCTCCACAAC    150
                     |.||.||.|||||.|||||..|.|||||.||.||||..|||||.||.|||
RBAM_009150__    101 AAGCGCTGAGCAAACTGCCGCGTGATTCTGCTCCGGCCAGGCTTCATAAC    150

BSNT_01508___    151 CGCTGTATGGTAACGGGACGCCCGAGAGGATATATGAGGAAGTTTAAAAT    200
                     |||||||.|||.|||||.||.||..|.|||||||||||.||.||||||.|
RBAM_009150__    151 CGCTGTACGGTGACGGGGCGGCCCCGCGGATATATGAGAAAATTTAAATT    200

BSNT_01508___    201 GTCCAGAATCGCTTTCAGGGAGCTGGCCCATAAAGGCCAGGTTCCCGGTG    250
                     ||||||||||||.||||||||||||||.||||||||||.|.|||||||.|
RBAM_009150__    201 GTCCAGAATCGCATTCAGGGAGCTGGCGCATAAAGGCCGGATTCCCGGGG    250

BSNT_01508___    251 TGAAAAAAGCAAGCTGGTAA    270
                     ||||||||||.|||||||||
RBAM_009150__    251 TGAAAAAAGCGAGCTGGTAA    270


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