Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01498 and RBAM_009090

See Amino acid alignment / Visit BSNT_01498 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence dna-align/BSNT_01498___katA.1.9828.seq
#    -bsequence dna-align/RBAM_009090___katA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01498___katA-RBAM_009090___katA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01498___katA-RBAM_009090___katA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01498___katA
# 2: RBAM_009090___katA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1454
# Identity:    1214/1454 (83.5%)
# Similarity:  1214/1454 (83.5%)
# Gaps:          10/1454 ( 0.7%)
# Score: 5116.5
# 
#
#=======================================

BSNT_01498___      1 ATGAGTTCAAATAAACTGACAACTAGCTGGGGCGCTCCGGTTGGAGATAA     50
                     |||||||||||||||.|||||||.||||||||||||||.||.||||||||
RBAM_009090__      1 ATGAGTTCAAATAAATTGACAACCAGCTGGGGCGCTCCTGTCGGAGATAA     50

BSNT_01498___     51 TCAAAACTCAATGACTGCCGGTTCTCGCGGACCAACTTTAATTCAAGATG    100
                     .||||||||||||||.|||||...||||||.||..|||||||.|||||.|
RBAM_009090__     51 CCAAAACTCAATGACGGCCGGCGATCGCGGTCCTGCTTTAATACAAGACG    100

BSNT_01498___    101 TACATTTACTCGAAAAATTGGCCCATTTCAACCGAGAACGTGTTCCTGAA    150
                     |.|||.|.||.||.||||||||.||.||.|||.|||||||.|||||.||.
RBAM_009090__    101 TCCATCTGCTTGAGAAATTGGCGCACTTTAACAGAGAACGCGTTCCCGAG    150

BSNT_01498___    151 CGTGTTGTTCACGCCAAAGGAGCAGGCGCACACGGATATTTTGAAGTGAC    200
                     |||||.||||||||.|||||.||.|||||||||||.|||||||||||.||
RBAM_009090__    151 CGTGTCGTTCACGCAAAAGGCGCGGGCGCACACGGTTATTTTGAAGTCAC    200

BSNT_01498___    201 AAACGACGTAACAAAATACACGAAAGCCGCTTTCCTTTCTGAAGTCGGCA    250
                     |||.|||||.||||||||.|||||||||||.||.||.||.||||||||.|
RBAM_009090__    201 AAATGACGTTACAAAATATACGAAAGCCGCATTTCTGTCAGAAGTCGGTA    250

BSNT_01498___    251 AACGCACACCGTTGTTCATCCGTTTCTCAACAGTTGCCGGTGAACTTGGC    300
                     |||||||.|||.|.|||||||||||||||||.|||||.||.|||||.|||
RBAM_009090__    251 AACGCACGCCGCTCTTCATCCGTTTCTCAACCGTTGCGGGCGAACTGGGC    300

BSNT_01498___    301 TCTGCTGACACAGTTCGCGATCCGCGCGGATTTGCTGTTAAATTTTATAC    350
                     |||..|||||||||.|||||.||||||||||||||.|||||.||||||||
RBAM_009090__    301 TCTAGTGACACAGTGCGCGACCCGCGCGGATTTGCCGTTAAGTTTTATAC    350

BSNT_01498___    351 TGAAGAAGGAAACTACGACATCGTCGGCAACAATACGCCTGTATTCTTTA    400
                     .||||||||||||||||||||||||||.||||||||.||.||.|||||.|
RBAM_009090__    351 AGAAGAAGGAAACTACGACATCGTCGGAAACAATACACCCGTGTTCTTCA    400

BSNT_01498___    401 TCCGCGATGCGATTAAGTTCCCTGATTTCATCCATACACAAAAAAGAGAT    450
                     ||||||||||.||.|||||||||||.||.|||||||||||||||||||||
RBAM_009090__    401 TCCGCGATGCCATCAAGTTCCCTGACTTTATCCATACACAAAAAAGAGAT    450

BSNT_01498___    451 CCAAAAACACACCTGAAAAACCCTACGGCTGTATGGGATTTCTGGTCACT    500
                     ||.|.||||||.|||||||||||.|||||.||.||||||||||||||.||
RBAM_009090__    451 CCGAGAACACATCTGAAAAACCCGACGGCCGTTTGGGATTTCTGGTCTCT    500

BSNT_01498___    501 TTCACCAGAGTCACTGCACCAAGTGACAATCCTGATGTCTGACCGCGGAA    550
                     .|||||.||.||.||||||||.||.||.||.||||||||.|||||.||.|
RBAM_009090__    501 GTCACCGGAATCCCTGCACCAGGTCACCATTCTGATGTCAGACCGGGGCA    550

BSNT_01498___    551 TTCCTGCGACACTTCGCCACATGCACGGCTTCGGAAGCCATACATTCAAA    600
                     ||||.|||||.||||||||.||||||||.|||||||||||||||||.|||
RBAM_009090__    551 TTCCGGCGACTCTTCGCCATATGCACGGATTCGGAAGCCATACATTTAAA    600

BSNT_01498___    601 TGGACAAATGCCGAAGGCGAAGGCGTATGGATTAAATATCACTTTAAAAC    650
                     ||||||||||...|||||||||||||.|||||.|||||||||||||||||
RBAM_009090__    601 TGGACAAATGATAAAGGCGAAGGCGTCTGGATCAAATATCACTTTAAAAC    650

BSNT_01498___    651 AGAACAAGGCGTGAAAAACCTTGATGTCAATACGGCAGCAAAAATTGCCG    700
                     |||.|||||||||||||||||||||||.|||||.||.||||||||.||.|
RBAM_009090__    651 AGAGCAAGGCGTGAAAAACCTTGATGTTAATACAGCCGCAAAAATCGCGG    700

BSNT_01498___    701 GTGAAAACCCTGATTACCATACAGAAGACCTTTTCAACGCAATCGAAAAC    750
                     |.|||||.||.|||||||||||.|||||..|.||||||||.||.||||||
RBAM_009090__    701 GCGAAAATCCCGATTACCATACGGAAGATTTGTTCAACGCGATTGAAAAC    750

BSNT_01498___    751 GGTGATTATCCTGCATGGAAACTATATGTGCAAATCATGCCTTTAGAAGA    800
                     ||.||||..||.|||||||||.|||||||.|||||||||||.||||||||
RBAM_009090__    751 GGCGATTTCCCCGCATGGAAATTATATGTTCAAATCATGCCGTTAGAAGA    800

BSNT_01498___    801 TGCAAATACGTACCGTTTCGATCCGTTTGATGTCACAAAAGTTTGGTCTC    850
                     .|||||.||.||.||.||.|||||||||||.|||||||||||.|||||||
RBAM_009090__    801 CGCAAACACATATCGCTTTGATCCGTTTGACGTCACAAAAGTATGGTCTC    850

BSNT_01498___    851 AAAAAGACTACCCGTTAATCGAGGTCGGACGCATGGTTCTAGACAGAAAT    900
                     |||||||.||.|||.|.|||||.|||||.|||||||||||..||.|.|||
RBAM_009090__    851 AAAAAGATTATCCGCTGATCGAAGTCGGCCGCATGGTTCTGAACCGCAAT    900

BSNT_01498___    901 CCGGAAAACTACTTTGCAGAGGTAGAACAAGCGACATTTTCACCTGGAAC    950
                     ||||||||.||||||||.||.||||||||.|||||.||.||.||.||.||
RBAM_009090__    901 CCGGAAAATTACTTTGCGGAAGTAGAACAGGCGACGTTCTCTCCCGGCAC    950

BSNT_01498___    951 CCTCGTGCCTGGTATTGATGTTTCACCGGATAAAATGCTTCAAGGCCGAC   1000
                     ..|.||.||.||..|.||.||.|||||.||.|||||||||||||||||..
RBAM_009090__    951 ATTAGTCCCCGGCGTCGACGTCTCACCTGACAAAATGCTTCAAGGCCGGT   1000

BSNT_01498___   1001 TGTTTGCTTATCATGATGCACACCGCTACCGTGTCGGTGCAAACCATCAA   1050
                     ||||.||.||.|||||.||.||.||||||||||||||.||.||||||||.
RBAM_009090__   1001 TGTTCGCATACCATGACGCGCATCGCTACCGTGTCGGCGCGAACCATCAG   1050

BSNT_01498___   1051 GCGCTGCCAATCAACCGCGCACGCAACAAAGTAAACAATTATCAGCGTGA   1100
                     ||||||||.||||||||..|.|||||..||||.||.||.|||||||||||
RBAM_009090__   1051 GCGCTGCCGATCAACCGTTCCCGCAATGAAGTGAAAAACTATCAGCGTGA   1100

BSNT_01498___   1101 TGGGCAAATGCGTTTTGATGATAACGGCGGCGGATCTGTGTATTACGAGC   1150
                     .||.|||||||||||||||||||||||||||.|.||.||.||||||||||
RBAM_009090__   1101 CGGACAAATGCGTTTTGATGATAACGGCGGCCGCTCCGTCTATTACGAGC   1150

BSNT_01498___   1151 CTAACAGCTTCGGCGGTCCAAAAGAGTCACCTGAGGATAAGCAAGCAGCA   1200
                     ||||||||||||||||.||.||||||||||||||.|||||.||.||.|||
RBAM_009090__   1151 CTAACAGCTTCGGCGGCCCGAAAGAGTCACCTGAAGATAAACAGGCGGCA   1200

BSNT_01498___   1201 TATCCGGTACAAGGTATCGCTGACAGCGTAAGCTACGATCACAACGATCA   1250
                     |||||.|||..||||.||||||||||.||||||||..||||..|.|||||
RBAM_009090__   1201 TATCCTGTATCAGGTTTCGCTGACAGTGTAAGCTATAATCATCATGATCA   1250

BSNT_01498___   1251 CTACACTCAAGCCGGTGATCTGTATCGTTTAATGAGTGAAGATGAACGTA   1300
                     .|||||.||||||||.||.|||||.||..|.|||||.|||||.||.||..
RBAM_009090__   1251 TTACACACAAGCCGGCGACCTGTACCGCCTGATGAGCGAAGAAGAGCGCG   1300

BSNT_01498___   1301 CCCGCCTTGTTGAAAATATCGTTAATGCTATGAAGCCGGTAGAAAAAGAA   1350
                     |.||||||||.|..||||||||.|.|||.|||||.||.||.|||||||||
RBAM_009090__   1301 CGCGCCTTGTCGCCAATATCGTCAGTGCGATGAAACCTGTGGAAAAAGAA   1350

BSNT_01498___   1351 GAAATCAAGCTGCGCCAAATCGAGCACTTCTACAAAGCGGATCCTGAATA   1400
                     |||||.|||||||||||.||||..||||||||||||||.|||||||||||
RBAM_009090__   1351 GAAATTAAGCTGCGCCAGATCGGCCACTTCTACAAAGCTGATCCTGAATA   1400

BSNT_01498___   1401 CGGAAAACGCGTGGCAGAAGGCCTTGGATTGCCGATTA--AAAAAGATGC   1448
                     |||.|.||||||.||.|||||.||.|||.|||| ||.|  ||||      
RBAM_009090__   1401 CGGCAGACGCGTTGCCGAAGGACTCGGACTGCC-ATCACCAAAA------   1443

BSNT_01498___   1449 TTAA   1452
                      |||
RBAM_009090__   1444 -TAA   1446


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