Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01495 and RBAM_009060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence dna-align/BSNT_01495___thiC.1.9828.seq
# -bsequence dna-align/RBAM_009060___thiC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01495___thiC-RBAM_009060___thiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01495___thiC-RBAM_009060___thiC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01495___thiC
# 2: RBAM_009060___thiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1781
# Identity: 1452/1781 (81.5%)
# Similarity: 1452/1781 (81.5%)
# Gaps: 16/1781 ( 0.9%)
# Score: 5962.0
#
#
#=======================================
BSNT_01495___ 1 ATGCAAAA-CAATTCAGTGCAGCAAGCCAACATTTCCATTATGTCAAGTT 49
|||||||| ||| |||||.||||||||.|||||||||||||||||.||||
RBAM_009060__ 1 ATGCAAAATCAA-TCAGTACAGCAAGCGAACATTTCCATTATGTCGAGTT 49
BSNT_01495___ 50 TTTCAGGCAGCAAGAAGGTATACGTGGAGGGTTCTTCTTCGGACATCCAA 99
||||.|||||.||.|||||.||.|..||.||||||||..|.||.||.|.|
RBAM_009060__ 50 TTTCCGGCAGTAAAAAGGTTTATGCAGAAGGTTCTTCGCCCGATATACGA 99
BSNT_01495___ 100 GTGCCGATGAGGGAGATCCTATTGAGTCCGACGACGGGATCGTTCGGCGA 149
|||||||||.||||.|||....|||||.||||.|||||..|.|||||.||
RBAM_009060__ 100 GTGCCGATGCGGGAAATCAGCCTGAGTGCGACTACGGGGGCATTCGGGGA 149
BSNT_01495___ 150 AGAGGAAAACGCGCCTGTGCGTGTCTATGATACAAGCGGACCGTATACGG 199
||||||.||.|||||.||.|||||.||||||||.|||||.||||||||.|
RBAM_009060__ 150 AGAGGAGAATGCGCCGGTCCGTGTTTATGATACGAGCGGGCCGTATACAG 199
BSNT_01495___ 200 ACCCTGAAGTAACCATTAATATTCAAGAAGGATTAAAGCCGCTCCGCCAA 249
||||.||.|||...|||.|||||||.|||||..|...|.||||||||..|
RBAM_009060__ 200 ACCCGGATGTACAGATTGATATTCATGAAGGGCTGGGGGCGCTCCGCACA 249
BSNT_01495___ 250 AAATGGATCACAGAGCGCGGTGACGTGGAAGAGTATGAAGGTCGGGCTAT 299
||.|||||.||.|.||||||.||.||.|||||.|||.|.||.|||....|
RBAM_009060__ 250 AAGTGGATTACCGGGCGCGGAGATGTAGAAGAATATAATGGACGGATCGT 299
BSNT_01495___ 300 AAAACCAGAAGATAACGGTTATAAAAAAGCAAATCCAAACGTAAGC---- 345
.||.||.|||||.||||||||||||||||.|.||| |.||
RBAM_009060__ 300 GAAGCCTGAAGACAACGGTTATAAAAAAGAAGATC-------ATGCTGCC 342
BSNT_01495___ 346 ---TACCCAGGATTAAAGCGGAAACCGCTGAGGGCGAAGGCAGGTCAAAA 392
|||||.||..||.|||||||||||||..||||.|||.||||..||||
RBAM_009060__ 343 GAATACCCCGGCCTACAGCGGAAACCGCTTCGGGCCAAGCCAGGGAAAAA 392
BSNT_01495___ 393 TGTCACACAAATGTACTATGCAAAAAAGGGGATCATTACACCTGAGATGG 442
|||.||||||.||.|.|||||.|.|||.||.||||||||.||.||.||||
RBAM_009060__ 393 TGTAACACAATTGCATTATGCGAGAAAAGGCATCATTACGCCGGAAATGG 442
BSNT_01495___ 443 AATTTATCGCCATTCGTGAGCATGTGTCTCCTGAATTCGTCAGAGACGAG 492
|.||||||||.||.|||||||||||||||||.|||||.|||||.||.|||
RBAM_009060__ 443 AGTTTATCGCAATACGTGAGCATGTGTCTCCCGAATTTGTCAGGGAAGAG 492
BSNT_01495___ 493 GTAGCCAGCGGCCGGGCGATTATTCCTTCAAACATTAATCACCCTGAAAG 542
||.||.|||||.|||||||||||||||||.|||.|.||.|||||.|||||
RBAM_009060__ 493 GTGGCGAGCGGACGGGCGATTATTCCTTCTAACGTCAACCACCCGGAAAG 542
BSNT_01495___ 543 TGAGCCAATGATTATCGGCCGGAATTTTCATGTGAAGATTAATGCAAATA 592
.|||||.|||||||||||||||||||||||||||||.||||||||.||||
RBAM_009060__ 543 CGAGCCGATGATTATCGGCCGGAATTTTCATGTGAAAATTAATGCCAATA 592
BSNT_01495___ 593 TCGGGAATTCAGCGGTTACGTCATCCATTGAAGAAGAAGTGGAAAAAATG 642
||||.||.||.||.|||||.||.||.||.|||||||||||.|||||||||
RBAM_009060__ 593 TCGGCAACTCGGCTGTTACATCTTCTATCGAAGAAGAAGTCGAAAAAATG 642
BSNT_01495___ 643 ACGTGGGCCATCCGCTGGGGAGCGGATACGATGATGGATCTCTCTACCGG 692
||||||||.||.||||||||.||.||||||||||||||..|.||.||.||
RBAM_009060__ 643 ACGTGGGCGATTCGCTGGGGCGCCGATACGATGATGGACTTATCCACGGG 692
BSNT_01495___ 693 AAAAGATATTCATACGACGCGTGAATGGATTATCCGCAATTGCCCCGTGC 742
||||||.||||||||||||||||||||||||||||||||.||||||||||
RBAM_009060__ 693 AAAAGACATTCATACGACGCGTGAATGGATTATCCGCAACTGCCCCGTGC 742
BSNT_01495___ 743 CTGTGGGAACTGTTCCGATTTATCAGGCGCTTGAAAAAGTAAACGGCGTA 792
|||||||.||.||.||||||||||||||||||||||||||.||.|||.|.
RBAM_009060__ 743 CTGTGGGGACGGTGCCGATTTATCAGGCGCTTGAAAAAGTTAATGGCATT 792
BSNT_01495___ 793 GCGGAGGATTTAACGTGGGAGATTTATCGTGATACGCTAATCGAGCAGGC 842
||.|||||||||||||||||.|||||||||||.||..|.||.||||||||
RBAM_009060__ 793 GCCGAGGATTTAACGTGGGACATTTATCGTGACACATTGATTGAGCAGGC 842
BSNT_01495___ 843 AGAGCAGGGAGTGGATTATTTTACGATTCACGCGGGTGTTTTGCTTAGGT 892
.||||||||.||||||||||||||.||.||.||.||.||.||||||.|.|
RBAM_009060__ 843 GGAGCAGGGTGTGGATTATTTTACCATACATGCCGGCGTATTGCTTCGTT 892
BSNT_01495___ 893 ATGTACCGCTGACTGCCAAACGGACAACTGGTATTGTGTCACGCGGGGGA 942
|.||.|||.|.||.||||||||.||.||.||.||.||.||.|||||.||.
RBAM_009060__ 893 ACGTCCCGTTAACGGCCAAACGCACGACAGGAATCGTATCCCGCGGCGGG 942
BSNT_01495___ 943 GCGATTATGGCGCAGTGGTGTCTGGCTCATCATCAAGAAAGCTTTTTATA 992
||||||||||||||.|||||.||||||||||||||.|||||||||.|.||
RBAM_009060__ 943 GCGATTATGGCGCAATGGTGCCTGGCTCATCATCAGGAAAGCTTTCTGTA 992
BSNT_01495___ 993 CACACATTTTGAAGAAATCTGTGAGATTATGAAAACGTATGATATTGCTT 1042
|||.||||||||||||||.|||||.||.|||||.||.||||||||.||||
RBAM_009060__ 993 CACGCATTTTGAAGAAATTTGTGAAATCATGAAGACCTATGATATCGCTT 1042
BSNT_01495___ 1043 TCTCTCTTGGGGATGGTTTGCGTCCCGGATCAATTGCTGATGCCAATGAC 1092
|.||.|||||.||.||..|.||.|||||.||.|||||.|||||||||||.
RBAM_009060__ 1043 TTTCACTTGGTGACGGGCTTCGCCCCGGTTCGATTGCGGATGCCAATGAT 1092
BSNT_01495___ 1093 GAAGCGCAGTTTGCTGAATTAGAGACGCTTGGAGAGCTGACGCAAATTGC 1142
||||||||||||||.|||||.|||||.||.|||||..|||||.|.|||||
RBAM_009060__ 1093 GAAGCGCAGTTTGCGGAATTGGAGACTCTCGGAGAATTGACGGAGATTGC 1142
BSNT_01495___ 1143 CTGGAAGCATGATGTTCAGGTGATGATTGAGGGTCCTGGACATGTTCCGA 1192
.||||||||.|||||.||.||||||||.||.||.||.||.|||||.||||
RBAM_009060__ 1143 GTGGAAGCACGATGTGCAAGTGATGATCGAAGGACCGGGTCATGTGCCGA 1192
BSNT_01495___ 1193 TGCATAAAATCAAAGAGAACGTCGATAAACAAATGGACATTTGTAAAGAA 1242
||||||||||.||.||.|||.|.||.||.||..||||.|||||||||||.
RBAM_009060__ 1193 TGCATAAAATTAAGGAAAACATGGACAAGCAGCTGGAAATTTGTAAAGAG 1242
BSNT_01495___ 1243 GCGCCTTTTTACACATTGGGGCCGTTGACAACGGATATTGCTCCGGGATA 1292
||||||||||||||..|.|||||.||.||.||||||||.||||||||.||
RBAM_009060__ 1243 GCGCCTTTTTACACGCTCGGGCCATTAACGACGGATATCGCTCCGGGTTA 1292
BSNT_01495___ 1293 TGACCATATTACTTCAGCGATCGGAGCGGCGATGATCGGTTGGTACGGGA 1342
||||||.|||||||||||.|||||.||||||||||||||.||||||||||
RBAM_009060__ 1293 TGACCACATTACTTCAGCAATCGGCGCGGCGATGATCGGCTGGTACGGGA 1342
BSNT_01495___ 1343 CAGCAATGCTTTGTTATGTAACGCCGAAGGAGCATTTGGGGCTGCCAAAC 1392
|.||.||||||||.|||||.||||||||||||||||||||||||||.||.
RBAM_009060__ 1343 CGGCGATGCTTTGCTATGTCACGCCGAAGGAGCATTTGGGGCTGCCGAAT 1392
BSNT_01495___ 1393 CGTGATGATGTTCGTGAAGGAGTCATTACATATAAGATCGCTGCGCACGC 1442
|||||||||||..|.|||||.||||||||.||.||.|||||.||.||.||
RBAM_009060__ 1393 CGTGATGATGTAAGAGAAGGCGTCATTACGTACAAAATCGCGGCACATGC 1442
BSNT_01495___ 1443 TGCGGACCTTGCAAAAGGGCATCCCGGAGCGCAAATCCGGGATGATGCGT 1492
.||.||||||||.|||||||||||.||.||.||.|||||.||.|||||..
RBAM_009060__ 1443 CGCAGACCTTGCTAAAGGGCATCCGGGTGCACAGATCCGTGACGATGCTC 1492
BSNT_01495___ 1493 TATCGAAAGCCCGTTTTGAATTCCGCTGGCGGGATCAGTTTAATTTATCT 1542
|.||.||.||.||.|||||||||||.|||||.|||||.|||.||||.||.
RBAM_009060__ 1493 TGTCTAAGGCGCGGTTTGAATTCCGGTGGCGTGATCAATTTCATTTGTCG 1542
BSNT_01495___ 1543 CTTGATCCGGAGAGAGCCCTTGAATACCATGATGAAACCCTGCCTGCTGA 1592
||||||||.||.|||||..|.|||||.|||||||||||.|||||.|||||
RBAM_009060__ 1543 CTTGATCCTGAAAGAGCAATGGAATATCATGATGAAACGCTGCCGGCTGA 1592
BSNT_01495___ 1593 AGGAGCAAAAACCGCTCACTTTTGTTCCATGTGCGGTCCGAAATTTTGCA 1642
|||.||||||||.||||||||.|||||.||||||||||||||.||.||||
RBAM_009060__ 1593 AGGCGCAAAAACGGCTCACTTCTGTTCGATGTGCGGTCCGAAGTTCTGCA 1642
BSNT_01495___ 1643 GCATGAGAATTTCACAGGATATTCGGGATTATGCGAAGAAAAACGATCTC 1692
|.|||||||||||.|||||||||||.||||||||||||.||||||..||.
RBAM_009060__ 1643 GTATGAGAATTTCTCAGGATATTCGTGATTATGCGAAGGAAAACGGACTT 1692
BSNT_01495___ 1693 AGTGAAGCAGAAGCCATAAATAAAGGATTAAAAGAAAAAGCAAAAGAGTT 1742
|.|||||..||.|||.|.||..||||..|.||||||||||||||||||||
RBAM_009060__ 1693 ACTGAAGACGAGGCCGTCAACGAAGGGCTGAAAGAAAAAGCAAAAGAGTT 1742
BSNT_01495___ 1743 TGTCGATACGGGAAGCAATTTATATCAATAA 1773
||..||.|.|||||||..|||||||||||||
RBAM_009060__ 1743 TGCAGAGAAGGGAAGCCGTTTATATCAATAA 1773
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