Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01449 and RBAM_008840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence dna-align/BSNT_01449___ygxA.1.9828.seq
# -bsequence dna-align/RBAM_008840___ygxA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01449___ygxA-RBAM_008840___ygxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01449___ygxA-RBAM_008840___ygxA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01449___ygxA
# 2: RBAM_008840___ygxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 886
# Identity: 700/886 (79.0%)
# Similarity: 700/886 (79.0%)
# Gaps: 2/886 ( 0.2%)
# Score: 2754.0
#
#
#=======================================
BSNT_01449___ 1 ATGGAAAATCTTCTCCGTCCAATTTACCAAGAAAGAGCAAGTCACCCCAA 50
|||||.||||||||||||||||||||||||||||||||||||||.|||.|
RBAM_008840__ 1 ATGGACAATCTTCTCCGTCCAATTTACCAAGAAAGAGCAAGTCATCCCGA 50
BSNT_01449___ 51 TACATTGGCTGTCATTATGATTGAGAGAAGAAACAAAACATCTTCCTTAA 100
|||..||||.|||.||||||||||||||||.|..|||.||||.|||.|.|
RBAM_008840__ 51 TACGCTGGCCGTCCTTATGATTGAGAGAAGGAGTAAAGCATCATCCATCA 100
BSNT_01449___ 101 CAGATAACTTTGATGCAGCTTTGCTGGTGATTGTAAAGGATGCTGATGAG 150
|.||||||||||||||.|...||||.||.|||||.||..|.||||||||.
RBAM_008840__ 101 CGGATAACTTTGATGCGGTCATGCTTGTCATTGTCAAACAGGCTGATGAA 150
BSNT_01449___ 151 CCAGTTTTTATAAAGCATTATGAATTTGATCATCAAACAGCTTCTTTGCA 200
||..||||||||||||||||||||||.||.||..||||.||||||||.||
RBAM_008840__ 151 CCTCTTTTTATAAAGCATTATGAATTCGAACAAAAAACCGCTTCTTTACA 200
BSNT_01449___ 201 TGTGGTAACAGATTCTCAGATTCAAGAATGGATTTTGCTTGGAACAAATA 250
|.|.|||||.|||.|||.|.||||.|||||||||.||||.||.||.||||
RBAM_008840__ 201 TATTGTAACGGATGCTCTGCTTCAGGAATGGATTCTGCTCGGGACCAATA 250
BSNT_01449___ 251 GAAGAATCATAGATTGGATTGTAAATGGCAGAGTCTTGTTTGACCGTAAT 300
|||||.|||||||||||||..|.||.||||.|||..||||||||||.|||
RBAM_008840__ 251 GAAGAGTCATAGATTGGATCATCAACGGCAAAGTGCTGTTTGACCGCAAT 300
BSNT_01449___ 301 GAATACGTAGTTGAACTGATTGACAGGCTGAATACATTTCCGTTTGCCGA 350
|||||..||..||||||.|.||||.||||.|..||.|||||.||.|||||
RBAM_008840__ 301 GAATATATATCTGAACTCAATGACCGGCTCAGCACTTTTCCTTTCGCCGA 350
BSNT_01449___ 351 ACGTAAACTGAAGATCGGACTCGAATACGGCAAATTAATCAGAAGGTATG 400
.||.|||.|.|||||||||.|.|||||||||||..|.||||||||.|.||
RBAM_008840__ 351 GCGGAAATTAAAGATCGGAATGGAATACGGCAAGCTGATCAGAAGATTTG 400
BSNT_01449___ 401 TTGAAGGGAAAGCTTTTTTTGAAGCCAATCAATTTTTAGATGCCTACAAC 450
|.|||||.|||||.|||||||||||..||||.|||.|.|||||.||..|.
RBAM_008840__ 401 TAGAAGGAAAAGCGTTTTTTGAAGCTGATCATTTTCTGGATGCATATTAT 450
BSNT_01449___ 451 GCCGTTGTTCATGCGCTGCATCATTTAGCACGTATTGAAGTAATCGACAG 500
||.||.||.|||||.||.||.||.||.||.||.||.|||||.||.|||.|
RBAM_008840__ 451 GCGGTAGTGCATGCTCTTCACCACTTGGCCCGCATAGAAGTGATTGACCG 500
BSNT_01449___ 501 AGGATTCCATCCCGAAACCACGGTGTGGAGCCAAGTGCGCCAGATGGAGC 550
.||.||..||||||||||.||.||.||||.|||.||.||.||.||.||||
RBAM_008840__ 501 GGGGTTTTATCCCGAAACGACAGTCTGGAACCAGGTCCGTCACATTGAGC 550
BSNT_01449___ 551 CGCAAGTGTACAAGTTATATTCCGAGCTGATTGAAAGTCACGAGAGCCTG 600
||||.||.||.|||.||||||||||.||..|.||.|||||.||.||..||
RBAM_008840__ 551 CGCAGGTATATAAGCTATATTCCGAACTTGTCGAGAGTCATGAAAGTTTG 600
BSNT_01449___ 601 GAAAAAAGACTTGAATTATTATTCTTAGCAAATGATTTTCTCATCCATTC 650
||.|||||.||.||||||||||||||||||||||||||||||||||||||
RBAM_008840__ 601 GAGAAAAGGCTCGAATTATTATTCTTAGCAAATGATTTTCTCATCCATTC 650
BSNT_01449___ 651 CAAAGCCGAGATCGGTTCGGCGCATCTTTTCGAAGTAATGAAAGAAAAAG 700
.|||||.||.||||||||.|||||.|||||..||||.|||||||||||||
RBAM_008840__ 651 AAAAGCTGAAATCGGTTCTGCGCACCTTTTTCAAGTGATGAAAGAAAAAG 700
BSNT_01449___ 701 ACATTTGGCAATTCGGTGAGCTTCTTCAACATCATGACCTAAAGCACTTT 750
|.||.|||||.||.||.||..|.|||||.||.|.|||.||...||||||.
RBAM_008840__ 701 AAATGTGGCAGTTTGGAGAATTGCTTCAGCACCCTGAACTGGTGCACTTC 750
BSNT_01449___ 751 ACCCAAGATCTTGGCGTTATGCTTGATTACTTGACAGAAAAGGGACTTAT 800
||||||||||||||.||.||||||||||||.||||.|||||.||..||.|
RBAM_008840__ 751 ACCCAAGATCTTGGTGTCATGCTTGATTACCTGACGGAAAAAGGCTTTGT 800
BSNT_01449___ 801 CAACGTCTGCCAGATAGAAACGAAAGGACAGGCTGTCTATCACCGAGGAT 850
..|.||.|..||.|||||.||.|||||.||||..||.|||||.|||||||
RBAM_008840__ 801 TGAAGTATCTCAAATAGAGACCAAAGGGCAGGAAGTATATCATCGAGGAT 850
BSNT_01449___ 851 ATTCTTTTAAAAAAGGTGTTGACTCTGATTCTTGA- 885
|||||||.||||||.||||||||.||||.||.| |
RBAM_008840__ 851 ATTCTTTCAAAAAAAGTGTTGACGCTGAATCAT-AG 885
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