Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01446 and RBAM_008820

See Amino acid alignment / Visit BSNT_01446 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence dna-align/BSNT_01446___perR.1.9828.seq
#    -bsequence dna-align/RBAM_008820___perR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01446___perR-RBAM_008820___perR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01446___perR-RBAM_008820___perR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01446___perR
# 2: RBAM_008820___perR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 439
# Identity:     379/439 (86.3%)
# Similarity:   379/439 (86.3%)
# Gaps:           2/439 ( 0.5%)
# Score: 1643.0
# 
#
#=======================================

BSNT_01446___      1 ATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGG     50
                     |||||||||||||||.||||||||||||||||.|||||||||||.||.||
RBAM_008820__      1 ATGGCTGCACATGAATTAAAAGAAGCCTTAGACACGTTGAAGGATACGGG     50

BSNT_01446___     51 AGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACT    100
                     |||.||.||||||||||||||||||||.|||||||||||||||||..|.|
RBAM_008820__     51 AGTCCGGATTACTCCTCAACGTCATGCCATTCTGGAATATCTCGTGGATT    100

BSNT_01446___    101 CTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAA    150
                     |||||||.|||||.|||||||||||||||||||||||..|||||||||||
RBAM_008820__    101 CTATGGCACATCCGACAGCGGACGATATATATAAAGCCTTGGAAGGGAAA    150

BSNT_01446___    151 TTTCCTAACATGAGCGTAGCGACAGTATATAACAATTTGCGTGTGTTCCG    200
                     ||.|||||.|||||.||.||||||||.|||||||||||||||||.|||||
RBAM_008820__    151 TTCCCTAATATGAGTGTTGCGACAGTGTATAACAATTTGCGTGTATTCCG    200

BSNT_01446___    201 GGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTCCAGCAGAT    250
                     ||||.|.||..|.|||||.||.||.||.|||||.|||||.||||||||||
RBAM_008820__    201 GGAAGCGGGGCTTGTAAAGGAACTGACGTACGGAGATGCGTCCAGCAGAT    250

BSNT_01446___    251 TCGATTTTGTGACATCTGATCACTATCACGCGATTTGCGAAAACTGCGGT    300
                     |.||.|||||.||.|||||.||.||||||||.|||||.||||.||||||.
RBAM_008820__    251 TTGACTTTGTCACCTCTGACCATTATCACGCCATTTGTGAAAGCTGCGGA    300

BSNT_01446___    301 AAAATTGTGGACTTCCACTA-CCCGGGCCTTGATGAAGTGGAACAGCTCG    349
                     |||||.||.||||||||.|| |||||| |||||.|||||.||||||||.|
RBAM_008820__    301 AAAATCGTAGACTTCCATTATCCCGGG-CTTGACGAAGTAGAACAGCTTG    349

BSNT_01446___    350 CTGCCCACGTCACAGGCTTCAAGGTAAGCCACCACCGTTTAGAAATTTAC    399
                     |.||.||||||||.||.||.||||||||||||||||||||.||.||||||
RBAM_008820__    350 CGGCTCACGTCACGGGGTTTAAGGTAAGCCACCACCGTTTGGAGATTTAC    399

BSNT_01446___    400 GGCGTCTGCCAAGAGTGTTCGAAAAAAGAAAATCATTAA    438
                     ||||||||||||||.|||||.|||||||||||.||.|||
RBAM_008820__    400 GGCGTCTGCCAAGAATGTTCCAAAAAAGAAAACCACTAA    438


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