Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01445 and RBAM_008810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_01445___ygaF.1.9828.seq
# -bsequence dna-align/RBAM_008810___ygaF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01445___ygaF-RBAM_008810___ygaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01445___ygaF-RBAM_008810___ygaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01445___ygaF
# 2: RBAM_008810___ygaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 367/482 (76.1%)
# Similarity: 367/482 (76.1%)
# Gaps: 16/482 ( 3.3%)
# Score: 1383.5
#
#
#=======================================
BSNT_01445___ 1 ATGACTATAGAAATCGGACAAAAAGCGCCTGATCT----TGAGT---TGA 43
|||||.||.|||||||||||||.|||.||.|||.| |.||| |||
RBAM_008810__ 1 ATGACGATTGAAATCGGACAAACAGCACCGGATATGAAATTAGTGAATGA 50
BSNT_01445___ 44 AAGGCGATCATGGGGAAACAGTAAAATTATCGGATTATAAAGGAAAGTAC 93
.|| .|||||||.||||..|||..||||||.||||||.||||||
RBAM_008810__ 51 CAG-------CGGGGAAAAAGTAGCATTGACGGATTTTAAAGGGAAGTAC 93
BSNT_01445___ 94 ATCGTGCTTTATTTTTATCCAAAGGACATGACACCGGGATGTACAACTGA 143
.||||.||.|||||||||||.||.|||||||||||.|||||.||.||.||
RBAM_008810__ 94 GTCGTTCTCTATTTTTATCCGAAAGACATGACACCCGGATGCACGACGGA 143
BSNT_01445___ 144 AGCATGCGATTTTCGGGA-CAGTCACGAAAGCTTCGCTGAACTGGATGCC 192
||||||.|||||.||.|| ||| ||||||||.|||||.|.|||.||||||
RBAM_008810__ 144 AGCATGTGATTTCCGTGATCAG-CACGAAAGTTTCGCGGGACTTGATGCC 192
BSNT_01445___ 193 GTCATTATTGGCGTCAGCCCGGACAGCCAGGAAAAACACGGAAAATTTAA 242
||.||.||.||.||.|||||.|||||||..||.|||||.|.|||||||||
RBAM_008810__ 193 GTTATCATCGGAGTAAGCCCTGACAGCCGTGATAAACATGAAAAATTTAA 242
BSNT_01445___ 243 AGAGAAGCATAACCTTCCATTTCTGCTTCTTGTAGATGACGAGCATAAGC 292
..|.||.||..|.|||||.||.|.|||.||.||.|||||.|||||.||.|
RBAM_008810__ 243 GCAAAAACACGATCTTCCTTTCCAGCTCCTCGTTGATGATGAGCACAAAC 292
BSNT_01445___ 293 TGGCGGAAGCATTTGATGTGTGGAAGCTGAAGAAAAACTTTGGAAAAGAG 342
||||||||||.|||||||||||||||||||||||.||.|||||.|||||.
RBAM_008810__ 293 TGGCGGAAGCTTTTGATGTGTGGAAGCTGAAGAAGAATTTTGGGAAAGAA 342
BSNT_01445___ 343 TATATGGGAATCGAGCGTTCCACTTTTTTAATTGATAAAGAAGGCCGGCT 392
||||||||.||||||||.|||||.|||||..|.||.|||||||||||.||
RBAM_008810__ 343 TATATGGGTATCGAGCGATCCACCTTTTTGTTAGACAAAGAAGGCCGTCT 392
BSNT_01445___ 393 CATTAAAGAATGGAGAAAAGTAAAAGTAAAGGACCATGTAGCCGAAGCGC 442
..|.||.||.||||||||.||||||||.||.||.||.||.|||||.||||
RBAM_008810__ 393 TGTGAAGGAGTGGAGAAAGGTAAAAGTGAAAGATCACGTTGCCGAGGCGC 442
BSNT_01445___ 443 TTCAAACCCTCAAAGATATGTCGGAAAAGTAA 474
|||.|....|..||.|.||..||...||.|||
RBAM_008810__ 443 TTCGAGAATTGGAACAAATTGCGTCTAATTAA 474
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