Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01433 and RBAM_008710

See Amino acid alignment / Visit BSNT_01433 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:08
# Commandline: needle
#    -asequence dna-align/BSNT_01433___yfhP.1.9828.seq
#    -bsequence dna-align/RBAM_008710___yfhP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01433___yfhP-RBAM_008710___yfhP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01433___yfhP-RBAM_008710___yfhP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01433___yfhP
# 2: RBAM_008710___yfhP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 987
# Identity:     764/987 (77.4%)
# Similarity:   764/987 (77.4%)
# Gaps:           6/987 ( 0.6%)
# Score: 2901.5
# 
#
#=======================================

BSNT_01433___      1 ATGGATACGGGCACACATGTCGTTATGGGCATCGCACTGGGCGGTATTGC     50
                     ||||||||.|||||.||.||.||.|||||.|||||.||.|||||.||.||
RBAM_008710__      1 ATGGATACTGGCACTCACGTTGTCATGGGTATCGCGCTTGGCGGAATCGC     50

BSNT_01433___     51 GACGCTTGATCCTGTTGTCGG-AT-CAGATCCGGCAATGGCTCACGCTGT     98
                     .||.||||||||||..||||| || ||.|.||  |.|||.||||.||.||
RBAM_008710__     51 AACTCTTGATCCTGCCGTCGGCATGCACACCC--CCATGTCTCAGGCAGT     98

BSNT_01433___     99 TATGATCGCAACGCTTGCGGGCTCTCAGGCTCCGGATATTGATACTGTGT    148
                     |||||||||..|.|||||.|||||||||||.||.|||||||||||..|.|
RBAM_008710__     99 TATGATCGCCGCTCTTGCCGGCTCTCAGGCACCTGATATTGATACCATAT    148

BSNT_01433___    149 TAAAGCTTAAAAACAATGCTGTTTATATAAGGAATCACAGAGGATTTACC    198
                     |.|||||.|||||.|||||.||||||||..|.|||||.|||||.||.||.
RBAM_008710__    149 TGAAGCTGAAAAATAATGCCGTTTATATTCGAAATCATAGAGGGTTCACG    198

BSNT_01433___    199 CATTCAATTCCCGCCGTTTTGTTTTGGTCTGTCATCATCCCGGCGATTCT    248
                     ||.||.||||||||||||||.||||||||.||..|.||.||||..|||.|
RBAM_008710__    199 CACTCCATTCCCGCCGTTTTATTTTGGTCCGTTCTGATTCCGGGTATTTT    248

BSNT_01433___    249 GTATTTATTTTATCCTCAGGCCGATTTTCTGCACCTGTGGCTGTGGACAC    298
                     ||.|.|.||||||||..|.||..|.|||.|||||||||||||||||||.|
RBAM_008710__    249 GTTTATGTTTTATCCGGAAGCGAACTTTTTGCACCTGTGGCTGTGGACGC    298

BSNT_01433___    299 TGCTGGCAGTCGTTCTGCATGTCTTTGTTGATATATTCAACGCCTATGGA    348
                     |.||.||.|||||..|||||||.||||||||.||.||.|||||.||.||.
RBAM_008710__    299 TCCTCGCTGTCGTGTTGCATGTGTTTGTTGACATTTTTAACGCGTACGGT    348

BSNT_01433___    349 ACACAAGCCATTCGTCCGTTTTCGAAAAAATGGGTTGCGCTCGGGCTGAT    398
                     |||||.|||||.||.||||||||||.|||||||.|.||.|||||..|.||
RBAM_008710__    349 ACACAGGCCATCCGCCCGTTTTCGAGAAAATGGATCGCTCTCGGTTTAAT    398

BSNT_01433___    399 TAATACGTTTGATCCGTTTATTTTTATCAGCCATCTGGCAGCTATCGCGA    448
                     .|||||.|||||||||||||||||..||||||||.||||.||.||.||..
RBAM_008710__    399 CAATACCTTTGATCCGTTTATTTTCGTCAGCCATTTGGCCGCGATTGCCG    448

BSNT_01433___    449 TTTGGTATGCAGGCGGGAGTCCCGGCATCACGTTTCTCA-GCTTATATAT    497
                     |.||||||...||.||...|||.|||.|.||.|||||.| |||| |||||
RBAM_008710__    449 TGTGGTATATCGGAGGTCATCCGGGCGTGACATTTCTGATGCTT-TATAT    497

BSNT_01433___    498 CATATTGGCAGGCTACTACTTGGTGCGCCTGATCATGCAGCTGAGAATTA    547
                     |||..|..||||.||.|||...||.||..|..|.|||||||||.|.||.|
RBAM_008710__    498 CATCCTCACAGGATATTACGCCGTCCGGTTTTTGATGCAGCTGCGGATAA    547

BSNT_01433___    548 AACGGAAGCTTCATGAGATGATTCATGATGAGATCGAAAGCATTATTATT    597
                     |.||.|.|||.|..||.||||||.|.||.|||||.||||.|||.||||||
RBAM_008710__    548 AGCGAAGGCTGCGCGAAATGATTGAAGAGGAGATTGAAACCATCATTATT    597

BSNT_01433___    598 TCTCCAACGATGAAATTCAGGCAATGGCGAATCGCAGTGACGACAGCACA    647
                     ||.||.|||||||||||||||||.|||||.|||||.||||||||.||.||
RBAM_008710__    598 TCGCCGACGATGAAATTCAGGCAGTGGCGTATCGCCGTGACGACGGCGCA    647

BSNT_01433___    648 TGCTTTCTATGTAGGAAGAAGCATGGAAGGACATGTCGTGATTCTGGATA    697
                     |||.||.|||||.||.||||||.|.||.||.|||||||||||..||||||
RBAM_008710__    648 TGCCTTTTATGTCGGCAGAAGCCTTGACGGCCATGTCGTGATATTGGATA    697

BSNT_01433___    698 CATTTAATCGGGTGCCTGTTCCTGAAACCGATGTAATGCATGCGGCAAAG    747
                     ||||.||.||.||.||.|||||.|||||||||||.|||.|.||.||.||.
RBAM_008710__    698 CATTCAACCGCGTACCCGTTCCGGAAACCGATGTGATGAAGGCCGCGAAA    747

BSNT_01433___    748 CAGGATGATAACATCGCGGCGTTTCTGTCCTTTTCTCCGGTTTACCGGTG    797
                     |||||.||.||.||.||.||.|||||.||.|||||.||.||||||.||||
RBAM_008710__    748 CAGGACGAAAATATTGCAGCCTTTCTTTCATTTTCCCCCGTTTACAGGTG    797

BSNT_01433___    798 GGAAGTGGATACGTTTAAAGATCATTATGAGGTGAGATTTATCGACCTGC    847
                     |||.||.|||||.|||||||||||||||||||||.|.|||||.||..|||
RBAM_008710__    798 GGAGGTCGATACCTTTAAAGATCATTATGAGGTGCGCTTTATTGATTTGC    847

BSNT_01433___    848 GTTATCGGAGCAAAGGCCATTATCCGTTTGTCGCAATTGTTCATATCGGC    897
                     |.||.||||||||||||||.|||||.||||||||.||.||.||..||.|.
RBAM_008710__    848 GCTACCGGAGCAAAGGCCACTATCCTTTTGTCGCCATCGTCCACCTCAGT    897

BSNT_01433___    898 CATGATCTCACGATCCGTTCGTCCTATACGGGATGGATATTCAGCGAAGA    947
                     ||||||.|...|.|.|..||.||.||.|||||.|||||.||||||||.||
RBAM_008710__    898 CATGATTTAGAGCTTCTCTCTTCTTACACGGGCTGGATTTTCAGCGAGGA    947

BSNT_01433___    948 AAAACTTCAGAAAAAATTAAAGCTCGGCTCTATATAG    984
                     |||..|.||||||||||||||||||||||||.|.||.
RBAM_008710__    948 AAAGTTGCAGAAAAAATTAAAGCTCGGCTCTGTTTAA    984


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01433 and RBAM_008710

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
