Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01368 and RBAM_008420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_01368___yfiD.1.9828.seq
# -bsequence dna-align/RBAM_008420___yfiD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01368___yfiD-RBAM_008420___yfiD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01368___yfiD-RBAM_008420___yfiD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01368___yfiD
# 2: RBAM_008420___yfiD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 414
# Identity: 303/414 (73.2%)
# Similarity: 303/414 (73.2%)
# Gaps: 18/414 ( 4.3%)
# Score: 1048.5
#
#
#=======================================
BSNT_01368___ 1 ATGAATAAATCATTTGAAATTGGCACATTACTTTTAAGAGTTATTACAGG 50
||||||||||||||.||||..||.|||.|.||||||||.|||.|.|||||
RBAM_008420__ 1 ATGAATAAATCATTCGAAACAGGAACACTGCTTTTAAGGGTTGTAACAGG 50
BSNT_01368___ 51 TATTATCTTTTTTGTTCACGGTTTATCAAAGTTTCAGGGAATGGAGGGCA 100
|||||||||||||||||||||||||||.||||||||.||..||||.||.|
RBAM_008420__ 51 TATTATCTTTTTTGTTCACGGTTTATCCAAGTTTCAAGGGTTGGAAGGAA 100
BSNT_01368___ 101 CCATCCAATTTTTCGGCAGCATAGGCCTTCCAAGCTTTATGGCGTATGTC 150
|....|||||||||...|||||.||..||||...||||||||..||||||
RBAM_008420__ 101 CTGCGCAATTTTTCCAGAGCATCGGGATTCCGGCCTTTATGGTCTATGTC 150
BSNT_01368___ 151 ATCGCAGCGATTGAACTCATTGGCGGAGTGCTTGTCTTCTTCGGATTGGC 200
|||||..|||||||.||..|.|||||.||.||..||||.|||||.|||||
RBAM_008420__ 151 ATCGCGACGATTGAGCTTGTCGGCGGGGTTCTGATCTTTTTCGGTTTGGC 200
BSNT_01368___ 201 TACACGTATTGTCGGTGTACTGTTCGCTCTTACACTGATCGGTGCCATCA 250
.||.||.|||.||||.||.|||||.||..|.|||.|..||||.||||||.
RBAM_008420__ 201 AACGCGCATTATCGGCGTTCTGTTTGCCGTCACATTAGTCGGCGCCATCT 250
BSNT_01368___ 251 TCACTGTTAAGCTGAAAGCGCCATTCATGGGC-AATGCAGAATTTGATT- 298
||||.|..|||||.....|.|||||.|||||| .|| |.||||||||||
RBAM_008420__ 251 TCACGGCGAAGCTTTCCTCACCATTTATGGGCGGAT-CGGAATTTGATTT 299
BSNT_01368___ 299 -ACCTT-CTGCTTTTGACATCCATTCACCTGGCGCTTACTGGAAGCCGAT 346
|.||| |||.|| .|.||.||||||.|.||||||.|.||||||||..
RBAM_008420__ 300 CATCTTACTGGTT---GCGTCAATTCACTTAGCGCTTTCAGGAAGCCGTC 346
BSNT_01368___ 347 TCCTGGCGCTGGA----CCCATTTGTGTTTAAAGGAAAAAAGAACAGAAA 392
|.||..|..|||| |.|.|| ||.|||..||||||| ..|||||
RBAM_008420__ 347 TGCTTTCATTGGATCAGCTCCTT----TTCAAATCAAAAAAG-GGAGAAA 391
BSNT_01368___ 393 C-GTTTCAGCATAA 405
| .|||||||||||
RBAM_008420__ 392 CTTTTTCAGCATAA 405
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