Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01360 and RBAM_008360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:03
# Commandline: needle
# -asequence dna-align/BSNT_01360___malA.1.9828.seq
# -bsequence dna-align/RBAM_008360___glvA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01360___malA-RBAM_008360___glvA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01360___malA-RBAM_008360___glvA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01360___malA
# 2: RBAM_008360___glvA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1354
# Identity: 1087/1354 (80.3%)
# Similarity: 1087/1354 (80.3%)
# Gaps: 8/1354 ( 0.6%)
# Score: 4319.0
#
#
#=======================================
BSNT_01360___ 1 ATGA-AGAAAAAATCATTCTCAATCGTAATAGCGGGCGGAGGGAGCACTT 49
|||| || |.|||||||||||||||||.||.||.|||||.||.|||||.|
RBAM_008360__ 1 ATGACAG-ACAAATCATTCTCAATCGTTATTGCAGGCGGCGGCAGCACAT 49
BSNT_01360___ 50 TCACTCCAGGGATCGTACTCATGCTCTTGGACCATTTGGAGGAGTTTCCG 99
|.||.||.||.||.|||.|.|||||.|||.|.||..||||.|||||||||
RBAM_008360__ 50 TTACCCCCGGAATTGTATTAATGCTTTTGAATCACCTGGAAGAGTTTCCG 99
BSNT_01360___ 100 ATCAGAAAGCTGAAGCTGTATGATAATGATAAGGAGAGACAGGATCGAAT 149
||||||||||||||.||.|||||.||||||||.||.||.|||||.||.||
RBAM_008360__ 100 ATCAGAAAGCTGAAACTTTATGACAATGATAAAGAAAGGCAGGAGCGGAT 149
BSNT_01360___ 150 TGCAGGCGCCTGTGACGTTTTTATCAGAGAAAAAGCGCCGGATATGGAAT 199
|||.||.||.|||||.||.|||||.|.|||||||||||||||.||.||||
RBAM_008360__ 150 TGCGGGTGCGTGTGAGGTATTTATAAAAGAAAAAGCGCCGGACATTGAAT 199
BSNT_01360___ 200 TTGCAGCGAC-GACTGACCCGGAAGA-AGCTTTTACAGATGTCGATTTTG 247
||...||||| || ||||||.| ||| .||||||||.|||||.||.||.|
RBAM_008360__ 200 TTCTGGCGACTGA-TGACCCAG-AGACGGCTTTTACGGATGTTGACTTCG 247
BSNT_01360___ 248 TTATGGCGCACATCAGAGTAGGGAAATACGCGATGCGTGCGCTTGATGAG 297
|.||||||||.|||.|.||.||.|||||.||||||||.|||||.|||||.
RBAM_008360__ 248 TCATGGCGCATATCCGCGTCGGAAAATATGCGATGCGCGCGCTCGATGAA 297
BSNT_01360___ 298 CAAATTCCGTTAAAGTACGGAGTTGTCGGCCAGGAGACGTGCGGGCCGGG 347
|||||.|||.|.||||||||.||.|||||||||||.||.|||||||||||
RBAM_008360__ 298 CAAATCCCGCTGAAGTACGGCGTGGTCGGCCAGGAAACATGCGGGCCGGG 347
BSNT_01360___ 348 CGGGATCGCATACGGTATGCGTTCGATCGGCGGTGTGCTTGAAATATTAG 397
|||.||||||||.||.|||||.||.|||||||||||.||.||.||..|.|
RBAM_008360__ 348 CGGAATCGCATATGGCATGCGCTCTATCGGCGGTGTTCTGGAGATTCTTG 397
BSNT_01360___ 398 ATTACATGGAAAAATACTCGCCTGATGCGTGGATGCTCAATTATTCCAAT 447
||||.|||||||..||||||||.||.||.||||||.|.|||||.||||||
RBAM_008360__ 398 ATTATATGGAAACGTACTCGCCCGACGCATGGATGTTGAATTACTCCAAT 447
BSNT_01360___ 448 CCGGCGGCAATTGTGGCTGAAGCTACGAGACGCCTTAAACCGAATTCTAA 497
||||||||.||||||||.||||||||..|.|||||.|.|||||||||.||
RBAM_008360__ 448 CCGGCGGCGATTGTGGCCGAAGCTACACGGCGCCTCAGACCGAATTCAAA 497
BSNT_01360___ 498 AATTCTCAATATCTGTGATATGCCGGTTGGGATCGAAGACCGGATGGCGC 547
|||..|.||.|||||.||.||||||||.||.||.||.||.||.||||||.
RBAM_008360__ 498 AATATTGAACATCTGCGACATGCCGGTCGGAATTGAGGATCGCATGGCGA 547
BSNT_01360___ 548 AAATTCTTGGCTTATCCTCAAGAAAAGAAATGAAGGTCCGCTATTACGGA 597
|.||.||.||.|||||.|||.|||||||||||||.|||||.||.|||||.
RBAM_008360__ 548 ACATCCTCGGATTATCTTCACGAAAAGAAATGAACGTCCGTTACTACGGC 597
BSNT_01360___ 598 TTAAATCACTTCGGCTGGTGGACATCAATTCA-GGATCAAGAGGGCAACG 646
||.||.|||||.|||||||||||.||.| ||| .||.|...|.|||||.|
RBAM_008360__ 598 TTGAACCACTTTGGCTGGTGGACGTCCA-TCACAGACCGGCATGGCAATG 646
BSNT_01360___ 647 ATTTAATGCCGAAGCTGAAGGAGCATGTATCTCAATACGGCTATATTCCG 696
|||||||||||||||||||.||||||||...|.||||||||||..|||||
RBAM_008360__ 647 ATTTAATGCCGAAGCTGAAAGAGCATGTCCGTGAATACGGCTACGTTCCG 696
BSNT_01360___ 697 AAAACAGAGGCTGAAGCGGTGGAAGCGAGCTGGAATGACACATTCGCCAA 746
||.||..||||.|||..|...|||||.||||||||||||||||||...||
RBAM_008360__ 697 AAGACGAAGGCCGAACAGACTGAAGCAAGCTGGAATGACACATTCAAAAA 746
BSNT_01360___ 747 AGCGCGTGACGTGCAGGCCGCAGATCCTGATACACTGCCGAATACGTATT 796
||||||.|||||.|||||.||.|||||.|||||.||.|||||.||.|||.
RBAM_008360__ 747 AGCGCGCGACGTACAGGCGGCTGATCCGGATACGCTTCCGAACACATATC 796
BSNT_01360___ 797 TGCAATATTATTTGTTCCCGGATGATATGGTGAAAAAATCAAATCCGAAT 846
||||||||||.||.|||||||||||||||||||||||||||||.|||||.
RBAM_008360__ 797 TGCAATATTACTTATTCCCGGATGATATGGTGAAAAAATCAAACCCGAAC 846
BSNT_01360___ 847 CATACGCGGGCAAATGAAGTGATGGAAGGGCGCGAAGCTTTTATTTTCAG 896
||||||.|.||.||.|||||.|||||||||||.||||||||.||||||||
RBAM_008360__ 847 CATACGAGAGCCAACGAAGTCATGGAAGGGCGGGAAGCTTTCATTTTCAG 896
BSNT_01360___ 897 CCAATGTGACATGATTACACGTGAGCAGTCCACAGAAAACAGCGAAATCA 946
||||||.||.||||||||.||.||.||.||..|.||.|||||.|||||.|
RBAM_008360__ 897 CCAATGCGATATGATTACGCGCGAACAATCGTCGGAGAACAGTGAAATTA 946
BSNT_01360___ 947 AAATCGATGACCACGCATCATATATCGTTGATCTTGCCCGGGCGATTGCC 996
||||.|||||.||.||.||.||||||||.||.|||||||||||.||.||.
RBAM_008360__ 947 AAATTGATGATCATGCTTCCTATATCGTCGACCTTGCCCGGGCCATCGCT 996
BSNT_01360___ 997 TACAACACAGGTGAAAGAATGCTGTTGATCGTTGAAAATAACGGCGCAAT 1046
|||||||||||.||.||.||||||||.||||||||||||||||||||.||
RBAM_008360__ 997 TACAACACAGGGGAGAGGATGCTGTTAATCGTTGAAAATAACGGCGCGAT 1046
BSNT_01360___ 1047 TGCGAACTTTGACCCGACTGCGATGGTCGAGGTGCCATGCATTGTCGGCT 1096
.||.||||||||.|||.|.||.|||||.|||.|.||.||..|.||.||.|
RBAM_008360__ 1047 CGCAAACTTTGATCCGTCAGCCATGGTTGAGATTCCTTGTCTCGTAGGTT 1096
BSNT_01360___ 1097 CAAATGGGCCTGAACCGATTACCGTCGGCACCATTCCGCAATTCCAAAAA 1146
||||.||.||.||||||.|..|.|||||.|.|||.||||||||.||||||
RBAM_008360__ 1097 CAAACGGACCGGAACCGCTCTCAGTCGGGAACATACCGCAATTTCAAAAA 1146
BSNT_01360___ 1147 GGGCTTATGGAGCAGCAGGTATCCGTTGAGAAGCTGACTGTTGAAGCGTG 1196
||.||.|||||.||||||||.||.||.||.||.|||||.|.|||||||||
RBAM_008360__ 1147 GGCCTGATGGAACAGCAGGTGTCTGTCGAAAAACTGACGGCTGAAGCGTG 1196
BSNT_01360___ 1197 GGCGGAGAAATCGTTCCAAAAGCTGTGGCAGGCGCTAATTTTGTCAAAAA 1246
||..|||...||.||.||||||||||||||||||||.||..|||||||||
RBAM_008360__ 1197 GGAAGAGCGGTCATTTCAAAAGCTGTGGCAGGCGCTGATCCTGTCAAAAA 1246
BSNT_01360___ 1247 CAGTGCCGAACGCGCGTGTGGCAAGACTCATTCTCGAGGATTTAATGGAG 1296
|||||||||||||.||||||||||||||.|||||.||.|||.|.||||||
RBAM_008360__ 1247 CAGTGCCGAACGCTCGTGTGGCAAGACTGATTCTTGAAGATCTGATGGAG 1296
BSNT_01360___ 1297 GCCAACAAAGACTTCTGGCCTGAGCTTGATCAAAGCCCGACCCGTATATC 1346
||.||.||.||||.||||||||||||||||..|||.|||.|.|.|||.||
RBAM_008360__ 1297 GCTAATAAGGACTACTGGCCTGAGCTTGATGTAAGTCCGTCTCCTATTTC 1346
BSNT_01360___ 1347 ATAA 1350
.|.|
RBAM_008360__ 1347 CTGA 1350
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