Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01346 and RBAM_008310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence dna-align/BSNT_01346___acoB.1.9828.seq
# -bsequence dna-align/RBAM_008310___acoB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01346___acoB-RBAM_008310___acoB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01346___acoB-RBAM_008310___acoB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01346___acoB
# 2: RBAM_008310___acoB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1029
# Identity: 933/1029 (90.7%)
# Similarity: 933/1029 (90.7%)
# Gaps: 0/1029 ( 0.0%)
# Score: 4281.0
#
#
#=======================================
BSNT_01346___ 1 ATGGCGAGAGTCATAAGCATGTCAGACGCGATCAATGAAGCAATGAAGCT 50
|||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_008310__ 1 ATGGCGAGAGTCATAAGCATGTCGGACGCGATCAATGAAGCAATGAAGCT 50
BSNT_01346___ 51 TGCGATGAGAAGAGATGAAAATGTGCTTTTGATCGGTGAGGATGTCGCCG 100
|||||||||||.|||.||.|||||||||.|.||||||||.||||||||||
RBAM_008310__ 51 TGCGATGAGAAAAGACGACAATGTGCTTGTAATCGGTGAAGATGTCGCCG 100
BSNT_01346___ 101 GGGGAGCGGCTGTCGATCATTTGCAGGATGATGAAGCATGGGGCGGTGTA 150
||||||||||.||||||||.|||||.||||||||||||||||||||||||
RBAM_008310__ 101 GGGGAGCGGCGGTCGATCACTTGCAAGATGATGAAGCATGGGGCGGTGTA 150
BSNT_01346___ 151 TTAGGGGTCACAAAGGGGCTCGTACAGGAATTCGGGCGTACAAGAGTGCT 200
.|.||||||||||||||||||||||||||||||||..|.|..||.|||||
RBAM_008310__ 151 CTGGGGGTCACAAAGGGGCTCGTACAGGAATTCGGCAGAAGCAGGGTGCT 200
BSNT_01346___ 201 GGACACACCGATTTCTGAGGCGGGCTATATGGGTGCGGCTATGGCTGCGG 250
|||||||||.|||||||||||||||||.|||||||||||.||||||||||
RBAM_008310__ 201 GGACACACCAATTTCTGAGGCGGGCTACATGGGTGCGGCCATGGCTGCGG 250
BSNT_01346___ 251 CATCAACCGGTTTGAGACCGATTGCCGAGCTGATGTTTAACGATTTTATC 300
||||.||.||..|||||||||||||.||.|||||||||||||||||||||
RBAM_008310__ 251 CATCCACGGGGCTGAGACCGATTGCGGAACTGATGTTTAACGATTTTATC 300
BSNT_01346___ 301 GGCACGTGCTTTGACCAGGTGATCAACCAAGGGGCGAAATTCCGTTACAT 350
||.||||||||||||||.||||||||||||||||||||||||||.||.||
RBAM_008310__ 301 GGAACGTGCTTTGACCAAGTGATCAACCAAGGGGCGAAATTCCGCTATAT 350
BSNT_01346___ 351 GTTTGGCGGAAAAGCGCAAGTGCCGATTACCGTCCGCACCACATACGGAG 400
|||.|||||.|||||||||||||||||.||||||||||||||||||||||
RBAM_008310__ 351 GTTCGGCGGTAAAGCGCAAGTGCCGATCACCGTCCGCACCACATACGGAG 400
BSNT_01346___ 401 CAGGGTTCCGGGCCGCTGCCCAGCATTCACAAGCGCTGTATGGCCTTTTC 450
|.||.||||||||.||.||.||||||||.||.||||||||||||||.|||
RBAM_008310__ 401 CCGGATTCCGGGCAGCCGCTCAGCATTCGCAGGCGCTGTATGGCCTGTTC 450
BSNT_01346___ 451 ACGAGCATCCCTGGACTGAAGACAGTTGTTCCATCCAATCCGTATGATGC 500
||.||||||||.||.||||||||.|||||.||.||||||||.|||||.||
RBAM_008310__ 451 ACCAGCATCCCGGGTCTGAAGACGGTTGTGCCGTCCAATCCATATGACGC 500
BSNT_01346___ 501 CAAAGGTCTTCTGCTTGCAGCAATAGAAGATAATGATCCGGTGTTCTTCT 550
|||||||.|.||||||.|.|||||||||||.|||||||||||.|||||.|
RBAM_008310__ 501 CAAAGGTTTGCTGCTTTCGGCAATAGAAGACAATGATCCGGTATTCTTTT 550
BSNT_01346___ 551 TTGAAGACAAAACGTCCTACAACATGAAGGGCGAGGTGCCGGAAGATTAT 600
|||||||.||||||||||||||||||||||||||||||||||||||||||
RBAM_008310__ 551 TTGAAGATAAAACGTCCTACAACATGAAGGGCGAGGTGCCGGAAGATTAT 600
BSNT_01346___ 601 TATACAATTCCCCTTGGAAAAGCGGATATCAAACGCGAGGGCAATGATGT 650
|||||||||||.||.|||||||||||||||||||||||.||||..||..|
RBAM_008310__ 601 TATACAATTCCGCTCGGAAAAGCGGATATCAAACGCGAAGGCAGCGACAT 650
BSNT_01346___ 651 TACGCTCTTTGCAGTCGGCAAGCAGGTCAATACTGCGCTTGAAGCGGCTG 700
.||.||.|||||.|||||||||||||||||||||||||||||||||||||
RBAM_008310__ 651 CACACTGTTTGCGGTCGGCAAGCAGGTCAATACTGCGCTTGAAGCGGCTG 700
BSNT_01346___ 701 CACAGCTTTCAGAGAGGGGCATCGAAGCCGAGGTCCTTGATCCGCGCAGT 750
|.||||||||.||||..||||||||.||||||||.||||||||.||.|||
RBAM_008310__ 701 CGCAGCTTTCTGAGAAAGGCATCGACGCCGAGGTGCTTGATCCCCGGAGT 750
BSNT_01346___ 751 CTGTCCCCTCTGGATGAGGATGCGATTTTCACATCGTTAGAAAAAACAAA 800
|||||.|||.|.||||||||.|||||||||||||||||||||||||||||
RBAM_008310__ 751 CTGTCTCCTTTAGATGAGGAAGCGATTTTCACATCGTTAGAAAAAACAAA 800
BSNT_01346___ 801 TCGTCTGATCATCATTGATGAAGCCAATCCGCGATGCAGCATTGCCACGG 850
.||.||||||||||||||.||||||||||||||.||||||||.|||||||
RBAM_008310__ 801 CCGGCTGATCATCATTGACGAAGCCAATCCGCGCTGCAGCATCGCCACGG 850
BSNT_01346___ 851 ATATTGCTGCGCTTGTCGCTGACAAGGGCTTTGATTTGCTTGATGCGCCG 900
|||||||||||.|||||||.||.|||||||||||||||||||||||||||
RBAM_008310__ 851 ATATTGCTGCGATTGTCGCCGATAAGGGCTTTGATTTGCTTGATGCGCCG 900
BSNT_01346___ 901 ATTAAACGGATTACAGCGCCGCATACACCGGTTCCGTTTTCACCAGTGCT 950
|||||||||||||||||||||||||||||.||.||||||||.||.|||||
RBAM_008310__ 901 ATTAAACGGATTACAGCGCCGCATACACCAGTGCCGTTTTCGCCGGTGCT 950
BSNT_01346___ 951 TGAAGATCAATATTTGCCGACACCAGATAAAATTGTCAGCGTCACGCTTG 1000
||||||||||||||||||||||.||||..|||||||||||||||||||||
RBAM_008310__ 951 TGAAGATCAATATTTGCCGACATCAGACCAAATTGTCAGCGTCACGCTTG 1000
BSNT_01346___ 1001 AATTGCTTGGCGAGCCGGCAATGAATTAA 1029
|||||||||||||||||||||||||||||
RBAM_008310__ 1001 AATTGCTTGGCGAGCCGGCAATGAATTAA 1029
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