Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01344 and RBAM_008300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence dna-align/BSNT_01344___acoA.1.9828.seq
# -bsequence dna-align/RBAM_008300___acoA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01344___acoA-RBAM_008300___acoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01344___acoA-RBAM_008300___acoA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01344___acoA
# 2: RBAM_008300___acoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1003
# Identity: 924/1003 (92.1%)
# Similarity: 924/1003 (92.1%)
# Gaps: 2/1003 ( 0.2%)
# Score: 4292.0
#
#
#=======================================
BSNT_01344___ 1 ATGAAATTGTTAAAACGAGAAGGCTTGTCATTAACTGAGGAAAAAGCGCT 50
|||.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_008300__ 1 ATGGAATTGTTAAAACGAGAAGGCTTGTCATTAACTGAGGAAAAAGCGCT 50
BSNT_01344___ 51 GTGGATGTACCAAAAGATGCTGGAGATCAGGGGCTTTGAAGACAAAGTGC 100
||||||||||||||||||||||||.|||||||||||||||||||||||||
RBAM_008300__ 51 GTGGATGTACCAAAAGATGCTGGAAATCAGGGGCTTTGAAGACAAAGTGC 100
BSNT_01344___ 101 ATGAACTGTTCGCCCAGGGAGTGCTTCCCGGATTCGTTCATTTATATGCC 150
|||||||||||||.||.||||||||||||||||||||.|||||.||||||
RBAM_008300__ 101 ATGAACTGTTCGCGCAAGGAGTGCTTCCCGGATTCGTCCATTTGTATGCC 150
BSNT_01344___ 151 GGTGAGGAAGCCGTGGCTGTAGGGGTGTGCGCTCATTTACATGATGGCGA 200
|||||.|||||.||.||||..||||||||||||||||||.||||||||||
RBAM_008300__ 151 GGTGAAGAAGCGGTAGCTGCGGGGGTGTGCGCTCATTTAGATGATGGCGA 200
BSNT_01344___ 201 CAGCATTACAAGCACCCACAGGGGACATGGACATTGTATCGCCAAAGGCT 250
|||||||||||||||.||||||||||||||.|||||||||||||||||||
RBAM_008300__ 201 CAGCATTACAAGCACGCACAGGGGACATGGCCATTGTATCGCCAAAGGCT 250
BSNT_01344___ 251 GTGATTTGGACGGCATGATGGCGGAAATTTTCGGGAAAGCGACCGGATTG 300
|||||.||||||||||||||||||||||.|||||.||||||||||||.||
RBAM_008300__ 251 GTGATCTGGACGGCATGATGGCGGAAATATTCGGAAAAGCGACCGGACTG 300
BSNT_01344___ 301 TGCAAAGGCAAGGGCGGTTCTATGCACATTGCGGATCTTGATAAAGGCAT 350
||.|||||.||.||||||||||||||||||||||||||||||||||||||
RBAM_008300__ 301 TGTAAAGGAAAAGGCGGTTCTATGCACATTGCGGATCTTGATAAAGGCAT 350
BSNT_01344___ 351 GTTAGGCGCAAATGGAATCGTCGGGGGCGGCTTTACGCTCGCATGCGGAT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_008300__ 351 GTTAGGCGCAAATGGAATCGTCGGGGGCGGCTTTACGCTCGCATGCGGAT 400
BSNT_01344___ 401 CAGCGCTCACGGCTAAATATAAACAGACTAAAAATGTAAGCGTTTGCTTT 450
|||||||||||||||||||||||||.|||||||||||||||||||||||.
RBAM_008300__ 401 CAGCGCTCACGGCTAAATATAAACAAACTAAAAATGTAAGCGTTTGCTTC 450
BSNT_01344___ 451 TTCGGGGACGGGGCAAATAACCAAGGCACCTTCCACGAAGGGCTGAATTT 500
||.||.|||||.||.|||||||||||.||||||||.|||||||||||.||
RBAM_008300__ 451 TTTGGAGACGGAGCCAATAACCAAGGGACCTTCCATGAAGGGCTGAACTT 500
BSNT_01344___ 501 AGCGGCTGTATGGAACCTTCCTGTCGTGTTTGTTGCTGAAAACAACGGCT 550
||||||.|||||||||||||||||||||||..|.||.|||||||||||||
RBAM_008300__ 501 AGCGGCAGTATGGAACCTTCCTGTCGTGTTCATCGCCGAAAACAACGGCT 550
BSNT_01344___ 551 ATGGCGAAGCTACCCCATTTGAGTACGCATCAGCCTGTGATTCAATCGCC 600
|.||||||||.||..|||||||||||||.|||||||||||||||||||||
RBAM_008300__ 551 ACGGCGAAGCCACGACATTTGAGTACGCGTCAGCCTGTGATTCAATCGCC 600
BSNT_01344___ 601 GATCGGGCAGCTGCTTATAACATGCCGGGGGTTACAGTTGACGGCAAAGA 650
||||||||.|||||.||.||.|||||||||||.||.||.|||||.|||||
RBAM_008300__ 601 GATCGGGCGGCTGCCTACAATATGCCGGGGGTCACGGTGGACGGAAAAGA 650
BSNT_01344___ 651 TATTTTAGCAGTTTACCAGGCAGCCGAGGAAGCGATAGAAAGAGCAAGAA 700
|||||||||||||||.||||||||||.|||||||||||||||||||||||
RBAM_008300__ 651 TATTTTAGCAGTTTATCAGGCAGCCGGGGAAGCGATAGAAAGAGCAAGAA 700
BSNT_01344___ 701 ACGGCGGCGGCCCGTCTTTGATTGAATGTATGACCTACAGAAACTACGGC 750
|||||||.||||||||||||||||||||||||||.||||||||||||||.
RBAM_008300__ 701 ACGGCGGAGGCCCGTCTTTGATTGAATGTATGACTTACAGAAACTACGGA 750
BSNT_01344___ 751 CATTTCGAAGGAGATGCCCAAACCTATAAAACGAAGGATGAAAGAG-TTG 799
|||||||||||.|||||||||||.||||||||.|||||||||| || .||
RBAM_008300__ 751 CATTTCGAAGGGGATGCCCAAACTTATAAAACAAAGGATGAAA-AGACTG 799
BSNT_01344___ 800 AGCACCTTGAAGAAAAAGATGCCATTCAAGGTTTTAAAAACTACCTTTTA 849
||||.|||||||||||.||||||||.|||||.|||||||||||.|||.||
RBAM_008300__ 800 AGCATCTTGAAGAAAAGGATGCCATCCAAGGCTTTAAAAACTATCTTCTA 849
BSNT_01344___ 850 AAAGAAACAGATGCTAATAAGCTGTCAGACATTGAACAGCGTGTCAGCGA 899
||||||||||||||.|||||.|||||||||||.|||||||||||||||||
RBAM_008300__ 850 AAAGAAACAGATGCAAATAAACTGTCAGACATCGAACAGCGTGTCAGCGA 899
BSNT_01344___ 900 ATCGATTGAAAAAGCCGTTTCGTTCAGCGAAGACAGTCCATATCCAAAAG 949
||||||||||||||||||.||||||||||||.|.|||||||||||.||||
RBAM_008300__ 900 ATCGATTGAAAAAGCCGTCTCGTTCAGCGAAAAGAGTCCATATCCGAAAG 949
BSNT_01344___ 950 ATTCGGAGCTGCTGACAGATGTGTACGTGTCATATGAAAAAGGAGGAATG 999
|.||.||||||.|||||||.||.||||||||||||||||||||.||||||
RBAM_008300__ 950 AGTCTGAGCTGTTGACAGACGTCTACGTGTCATATGAAAAAGGGGGAATG 999
BSNT_01344___ 1000 TAA 1002
|.|
RBAM_008300__ 1000 TGA 1002
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