Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01336 and RBAM_008230
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence dna-align/BSNT_01336___yfjQ.1.9828.seq
# -bsequence dna-align/RBAM_008230___yfjQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01336___yfjQ-RBAM_008230___yfjQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01336___yfjQ-RBAM_008230___yfjQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01336___yfjQ
# 2: RBAM_008230___yfjQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 977
# Identity: 732/977 (74.9%)
# Similarity: 732/977 (74.9%)
# Gaps: 34/977 ( 3.5%)
# Score: 2675.5
#
#
#=======================================
BSNT_01336___ 1 ATGATCAACATTACCGCAATCACAACAGAGCATCAGCTGCTGAAAAATAT 50
|||||..|.||.|||||||||||||||.|..||.||.|..|..|.|||||
RBAM_008230__ 1 ATGATACATATAACCGCAATCACAACACATAATGAGATATTAGATAATAT 50
BSNT_01336___ 51 --ACCGATCGAACGAGTGGAACAGCCTGATATTGCATGGTACTGGGTTGA 98
.||.||| |||....|||||.||.||.||.||||||||||||.||||
RBAM_008230__ 51 CCCCCTATC--ACGTACAGAACAACCGGACATCGCATGGTACTGGATTGA 98
BSNT_01336___ 99 TTTTTACGGCCCGGAGGATAC-GGAAACGGCGTTATTGAGAGATTTTTTT 147
|||||.||||.|.|| |||.| .|||||.|.|.|..||.|.||||.||||
RBAM_008230__ 99 TTTTTTCGGCGCTGA-GATGCATGAAACCGAGCTGCTGCGTGATTATTTT 147
BSNT_01336___ 148 CATTTTCACCCGCTTGCCATTGAGGATTGCTTCCAGCACATGCAGCGGCC 197
||.|||||.||||||||.||.|||||||||||.|||||.|||||||||||
RBAM_008230__ 148 CACTTTCATCCGCTTGCGATCGAGGATTGCTTTCAGCATATGCAGCGGCC 197
BSNT_01336___ 198 GAAGCTTGACCATTATGACGGCTATCGTTTTTACGTGATTCATGCGCTGA 247
|||..|.|||||||||||||||||.||||||||.|||.|.||.||.||||
RBAM_008230__ 198 GAAAATCGACCATTATGACGGCTACCGTTTTTATGTGCTCCACGCTCTGA 247
BSNT_01336___ 248 ATAAGGAAACACTTGAGACGGAGGAAGTCGATATCTTTCAAGGCGAAAAA 297
|...|||.|||||.||.|.|||.||.||.||.||.|||||...|||....
RBAM_008230__ 248 ACCCGGACACACTGGAAATGGAAGAGGTGGACATTTTTCAGTCCGACCGT 297
BSNT_01336___ 298 TTTGTCGTCACCTTTCATTTACACGAAACGCCAGGTATCGCTAAAGTCCG 347
||..||||||.|||.|||||.||||||.||||.||..||.|.||.||..|
RBAM_008230__ 298 TTCATCGTCAGCTTCCATTTGCACGAATCGCCCGGCGTCTCAAAGGTGAG 347
BSNT_01336___ 348 GGAGCGTTTGTATGCTTCACC-GGATATATTGAAAAAAGGGCCCGGGCAT 396
.||.||.||.|..|||||.|| |||| ||...|||||||||||||||||.
RBAM_008230__ 348 AGAACGGTTTTTCGCTTCTCCGGGAT-TAGCCAAAAAAGGGCCCGGGCAC 396
BSNT_01336___ 397 ATTTCTTATATGATCATGGATCAGCTTGTTGATGAATATTTTCCTCTCGT 446
||..||||||||||.||||||||||||||.|||||||||||.||..|..|
RBAM_008230__ 397 ATCACTTATATGATGATGGATCAGCTTGTCGATGAATATTTCCCCGTGCT 446
BSNT_01336___ 447 GTATAAAATCGAAGACCGGCTGAATGAAATTGAAGAAAGCCGTCCCCACA 496
|||.|||||.||||||||||||||||||||||||||.|||.|..||||.|
RBAM_008230__ 447 GTACAAAATTGAAGACCGGCTGAATGAAATTGAAGACAGCAGAACCCATA 496
BSNT_01336___ 497 AAACGTATGGAATGCTGATGAACGAGGTGTTTGATCTCAGAACAGACCTA 546
||.|.||.||.|...|.|||||.||.||||||||..|..|.||.||.||.
RBAM_008230__ 497 AATCTTACGGCACTTTAATGAATGAAGTGTTTGAATTGCGGACTGATCTT 546
BSNT_01336___ 547 TTGCATTTAAGACGGACGATTATCCCGATGCGTGATTTGCTCTACCGGAT 596
|||.|..|.||.||||||||.||.||||||||.|||||..|.||||||||
RBAM_008230__ 547 TTGAACCTGAGGCGGACGATCATTCCGATGCGCGATTTAATGTACCGGAT 596
BSNT_01336___ 597 TTTAAGCCTTGACCATGTGAAAG--AGCAGCGGGAGACGAAAGCCTATTT 644
|||.||||||||||||||.|||| ||| ||.||.||||||||.|||||
RBAM_008230__ 597 TTTGAGCCTTGACCATGTAAAAGAAAGC--CGTGAAACGAAAGCGTATTT 644
BSNT_01336___ 645 CAGCGACATATATGATCATTTGTTAAAGTTGTCTGAAATTGTGGAATCCA 694
||||||.||.|||||.||..|||||||..||.||||..|..|.||.||.|
RBAM_008230__ 645 CAGCGATATTTATGACCACCTGTTAAAACTGGCTGAGCTGATCGAGTCAA 694
BSNT_01336___ 695 ACCGTGACATGACGTCCGACTTGCGTGACAGCTACGTGACGCTAAACTCA 744
|||||||.||||||||.||.|||||.||||||||.||||||||.||.|||
RBAM_008230__ 695 ACCGTGATATGACGTCAGATTTGCGAGACAGCTATGTGACGCTGAATTCA 744
BSNT_01336___ 745 AACCGGATGAATGCGATTATGATGACACTGACGATCGTATCAACCATTTT 794
|||||||||||.||.||||||||||||.|.||.|||||.||.||||||||
RBAM_008230__ 745 AACCGGATGAACGCCATTATGATGACATTAACCATCGTCTCGACCATTTT 794
BSNT_01336___ 795 CATCCCGCTCACCTTTATTACCGGTGTATACGGTATGAACTTCGACTTTA 844
.||||||||.||.||.||..|.||.||.|||||.|||||.|||||....|
RBAM_008230__ 795 TATCCCGCTGACGTTCATCGCGGGGGTTTACGGCATGAATTTCGATAACA 844
BSNT_01336___ 845 TGCCGGAGCTGCATTGGAAATACGGATATT---TCGCTGTACTT-GGCCT 890
||||.|||||.||||||||||||||.|||| |||.| || |||.|
RBAM_008230__ 845 TGCCTGAGCTTCATTGGAAATACGGGTATTTTATCGTT----TTGGGCGT 890
BSNT_01336___ 891 GATGGCTGCGCTTGTGATTGGAATGCTGATTTGGTTTAGATAT------- 933
.|||||.|..||||||...|..||||||.|||||| |
RBAM_008230__ 891 AATGGCCGTTCTTGTGGCCGCCATGCTGTTTTGGT-------TCGCCCGC 933
BSNT_01336___ 934 AAAGGATGGTTCAATATTTTTAAATGA 960
|||||.|||||.||||||||.||.|.|
RBAM_008230__ 934 AAAGGCTGGTTTAATATTTTCAAGTAA 960
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