Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01329 and RBAM_008180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence dna-align/BSNT_01329.1.9828.seq
# -bsequence dna-align/RBAM_008180___yfkA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01329-RBAM_008180___yfkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01329-RBAM_008180___yfkA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01329
# 2: RBAM_008180___yfkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1123
# Identity: 915/1123 (81.5%)
# Similarity: 915/1123 (81.5%)
# Gaps: 2/1123 ( 0.2%)
# Score: 3731.0
#
#
#=======================================
BSNT_01329 1 ATGACACAAAACACGAAGCTGCGTCCGATTACGCCCGAGTTTGACCCTTG 50
||||||||||||||.|..|||||||||||.||.||.||||..||.|||||
RBAM_008180__ 1 ATGACACAAAACACAACACTGCGTCCGATCACACCGGAGTACGATCCTTG 50
BSNT_01329 51 GGAAGCCTATATGGATGTTGACCAATACGGAGACATGCAGCTGACAAACG 100
||||||.||.||||||||.|||||.||.|||||.|||.|.|||||.||||
RBAM_008180__ 51 GGAAGCGTACATGGATGTCGACCAGTATGGAGATATGAAACTGACGAACG 100
BSNT_01329 101 TTGAATTCACAACAACGACACTGTGCAATATGAGATGCGAGCATTGTGCT 150
|||||||||||||.|||||..||||||||||||||||||||||.||.||.
RBAM_008180__ 101 TTGAATTCACAACGACGACTTTGTGCAATATGAGATGCGAGCACTGCGCC 150
BSNT_01329 151 GTAGGCTATACATTGCAGCCTAAAGACCCGAATGCTCTGCCAATAGATCT 200
||.||.||.||..|.|||||.||||||||||||||.|||||.||.||.||
RBAM_008180__ 151 GTCGGGTACACGCTCCAGCCGAAAGACCCGAATGCGCTGCCGATCGACCT 200
BSNT_01329 201 TCTGTTAAAACGGCTGGAGGAAATCCCGCGCCTCAGATCCATCAGCATCA 250
|.|.|||||.|||||.||.|||||.||.|...|..|.||.||||||||.|
RBAM_008180__ 201 TTTATTAAAGCGGCTTGATGAAATTCCTCTGTTACGCTCTATCAGCATTA 250
BSNT_01329 251 CAGGCGGAGAGCCGATGCTTTCGTTGAAATCAGTAAAAGAATATGTTGTT 300
|.|||||.||.||||||||||||.|||||||.|||||.|||||.||.||.
RBAM_008180__ 251 CGGGCGGCGAACCGATGCTTTCGCTGAAATCGGTAAAGGAATACGTCGTC 300
BSNT_01329 301 CCTTTATTGAAATATGCCCATGAACGGGGTGTGCGGACACAAATTAATTC 350
||..|.||||||||||||||||||||.||.|||||.|||||.||.|||||
RBAM_008180__ 301 CCGCTTTTGAAATATGCCCATGAACGCGGCGTGCGCACACAGATCAATTC 350
BSNT_01329 351 AAATCTGACCCTCGACATCGAGCGGTACGAATGGATCATTCCGTATCTCG 400
|||.|||||.||.||.||||.|||.||||||.||||.|||||.|||||.|
RBAM_008180__ 351 AAACCTGACGCTTGATATCGGGCGCTACGAACGGATTATTCCCTATCTGG 400
BSNT_01329 401 ATGTGCTACATATTTCTCATAACTGGGGTACAGTTGAAGATTTTGCTGAA 450
|.||.||.||.||||||||.||.|||||.||.||.||.||.|||||.||.
RBAM_008180__ 401 ACGTTCTTCACATTTCTCACAATTGGGGAACGGTCGAGGACTTTGCCGAC 450
BSNT_01329 451 ATCGGCTTTGCCATGATGGACAGAAAACCGACCTTCGAACAGCGCGCGCG 500
|||||.|||||.||||||||.|..||||||||.||.||||||||.|||||
RBAM_008180__ 451 ATCGGATTTGCGATGATGGAGAAGAAACCGACATTTGAACAGCGGGCGCG 500
BSNT_01329 501 CTATTTTGAAAAAATGATCGAAAACAGCCGCACGCTCGTGGATGCCGGAG 550
|||||||||.||||||||.|||||||||||||||||.||.||.||.||.|
RBAM_008180__ 501 CTATTTTGACAAAATGATTGAAAACAGCCGCACGCTGGTCGAAGCAGGCG 550
BSNT_01329 551 TAATGGTATCTGCGGAAACGATGCTGAACAAACGAACACTTCCGCATATT 600
|||||||.||.|||||||||||||||||||||||.||.||.|||||||||
RBAM_008180__ 551 TAATGGTTTCAGCGGAAACGATGCTGAACAAACGGACGCTGCCGCATATT 600
BSNT_01329 601 GAGCATATTCACCGCCAAATCACAGAAGATATGAAATGTCAGCGTCACGA 650
||.||||||||.||.|||||.||.|||||.||||||||.|||||.|||||
RBAM_008180__ 601 GAACATATTCATCGGCAAATTACGGAAGAAATGAAATGCCAGCGGCACGA 650
BSNT_01329 651 GGTCCACCCAATGTATCCAAGCGATTTCGCAAGCGCTCTTGAATCCCTCA 700
.|||||.||.||||||||.||.||||||||.|||||.||||||||.||||
RBAM_008180__ 651 AGTCCATCCGATGTATCCGAGTGATTTCGCCAGCGCGCTTGAATCACTCA 700
BSNT_01329 701 GCCTGAAAGAGATGAGACAGGCCATTCACCGCTTGCTGGATATTCGTGAT 750
||||||..||.|||||||||||||||||.|...||||.||.|||||.|||
RBAM_008180__ 701 GCCTGACGGACATGAGACAGGCCATTCATCATCTGCTCGACATTCGCGAT 750
BSNT_01329 751 GAAAATACGTGGATGCTGTTCGGAACGCTGCCGTTTTATGCCTGCAGTCC 800
|||.|.||.||||||||||||||.|||||.||||||||.||.|||||.||
RBAM_008180__ 751 GAAGAGACATGGATGCTGTTCGGTACGCTCCCGTTTTACGCATGCAGCCC 800
BSNT_01329 801 GGACGAAGACGACCAAAAGCTGCTTCGCCGGCTTCGCGCGGCGAAAAACG 850
.||.|||||.||.||.|||||.||.|||||.||.||.|..||||.|||||
RBAM_008180__ 801 TGATGAAGAAGATCAGAAGCTCCTCCGCCGCCTGCGGGAAGCGAGAAACG 850
BSNT_01329 851 TCACAGTGCGAAATGACCCTGACGGCCGGTCCCGCCTGAATGTGAACATT 900
|.||.||||||||.||||||||||||||.||||||||||||||.||||||
RBAM_008180__ 851 TTACGGTGCGAAACGACCCTGACGGCCGCTCCCGCCTGAATGTCAACATT 900
BSNT_01329 901 TTCGACGGAAACATTATCGTGACCGATTTCGGTGATACCCCGCCGCTTGG 950
||.||||||||.||.||.||.||.||||||||.|||||.||||||||.||
RBAM_008180__ 901 TTTGACGGAAATATCATTGTCACGGATTTCGGCGATACACCGCCGCTCGG 950
BSNT_01329 951 CAACATTCAGACGGACAGCCTCCCTTCCGCCTATGAAAAGTGGAGAGAGA 1000
|||.|||.|.||.||||||||.|||...||.|||||.|||||||||.|||
RBAM_008180__ 951 CAATATTAAAACAGACAGCCTTCCTGAAGCATATGACAAGTGGAGACAGA 1000
BSNT_01329 1001 CCAAGCTTGCG-AAAGAACTAAGTTGCCACTGCCCGAATGTCCGGTGCCT 1049
|.|||| ||.| |||||.||.|..||||.||||.|.||.|||||||||||
RBAM_008180__ 1001 CGAAGC-TGAGCAAAGAGCTGAACTGCCGCTGCACAAACGTCCGGTGCCT 1049
BSNT_01329 1050 CGGACCGAATGTTCTTGTCAAAAACAGTTATTATCAGGATACAGACTTCA 1099
|||.|||||.||.||||||||||||||||||||||||||.|||||.||..
RBAM_008180__ 1050 CGGCCCGAACGTCCTTGTCAAAAACAGTTATTATCAGGACACAGATTTTT 1099
BSNT_01329 1100 CAAAACGTCAAGCCAGGAGTTAG 1122
||..|||..|||||||..||||.
RBAM_008180__ 1100 CATTACGAAAAGCCAGAGGTTAA 1122
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