Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01326 and RBAM_008150
See
Amino acid alignment /
Visit
BSNT_01326 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence dna-align/BSNT_01326___yfkE.1.9828.seq
# -bsequence dna-align/RBAM_008150___yfkE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01326___yfkE-RBAM_008150___yfkE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01326___yfkE-RBAM_008150___yfkE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01326___yfkE
# 2: RBAM_008150___yfkE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1067
# Identity: 849/1067 (79.6%)
# Similarity: 849/1067 (79.6%)
# Gaps: 22/1067 ( 2.1%)
# Score: 3364.5
#
#
#=======================================
BSNT_01326___ 1 ATGAATCGTATCTTTTTTATTTTA--GTGGCGGCCGGTGTTCCGCTTTCT 48
||||||||.| ||||||..|||| |..|||||.||.||.||||||||.
RBAM_008150__ 1 ATGAATCGGA--TTTTTTTCTTTACGGCTGCGGCGGGAGTGCCGCTTTCA 48
BSNT_01326___ 49 GTGATTGGCAGTTTGATGCATTGGCCTTCCGCGGTTCTATTTGCAGTTTA 98
||.||.|||.|..|||||||.|||||.||.||||||.|.|||....||||
RBAM_008150__ 49 GTCATCGGCGGCCTGATGCACTGGCCGTCAGCGGTTTTGTTTATTATTTA 98
BSNT_01326___ 99 TTGCGTGACGATTATCGCGCTTGCAAGCTATATGGGGAGGGCGACAGAAT 148
||||.||||||||||.|||||||||||.|||||||||||.|||||.||||
RBAM_008150__ 99 TTGCTTGACGATTATTGCGCTTGCAAGTTATATGGGGAGAGCGACTGAAT 148
BSNT_01326___ 149 CACTGTCCATCATTGCAGGACCGCGTATCGGCGGTTTGTTGAATGCCACC 198
|.||..||||.||.||.||||||||.|||||||||.||.||||||||||.
RBAM_008150__ 149 CTCTTGCCATTATCGCGGGACCGCGGATCGGCGGTCTGCTGAATGCCACG 198
BSNT_01326___ 199 TTCGGGAATGCGGTGGAGCTGATTATTTCCCTTTTTGCATTAAAAGAAGG 248
|||||.||||||||.|||||||||||.||.|||||.||.|||||||||||
RBAM_008150__ 199 TTCGGCAATGCGGTAGAGCTGATTATATCGCTTTTCGCCTTAAAAGAAGG 248
BSNT_01326___ 249 CCTGACAGGAATCGTGCTTGCCTCTTTAACCGGTTCAGTGCTGGGGAACC 298
.|||||.||.|||||||||||.||..|.||||||||.|||||.||.||.|
RBAM_008150__ 249 GCTGACGGGCATCGTGCTTGCTTCACTGACCGGTTCGGTGCTCGGCAATC 298
BSNT_01326___ 299 TGTTGCTGGTAGCGGGCCTATCGTTTTTTGTCGGCGGTTTAAAATATAAG 348
|..||||.||.|||||.||.|||||||||.||||||||||.|||||.|||
RBAM_008150__ 299 TTCTGCTCGTCGCGGGACTGTCGTTTTTTATCGGCGGTTTGAAATACAAG 348
BSNT_01326___ 349 CGGCAGGAATTTAATATCCATGATGCCCGCCATAACTCCGGGCTTCTGAT 398
|||||||||||.|||||.||||||||.||.|||||.||.||.||.|||||
RBAM_008150__ 349 CGGCAGGAATTCAATATTCATGATGCACGGCATAATTCTGGCCTGCTGAT 398
BSNT_01326___ 399 TTTTGCCATCATTGTCGCCTTTGTGATTCCGGAGGTATTCTCTGTTGGTA 448
|||||||||.||.||.||.|||||.|||||.||.||.||.||..|.|.||
RBAM_008150__ 399 TTTTGCCATTATCGTTGCTTTTGTCATTCCCGAAGTGTTTTCCATGGATA 448
BSNT_01326___ 449 TGGG----AAACGCCAGCAAGCTCAATTTAAGCATCGGCATCAGCATCAT 494
|||| ||| |.||||||..||||.||..||||||||||||||||
RBAM_008150__ 449 TGGGGGAAAAA----AACAAGCTTGATTTGAGTGTCGGCATCAGCATCAT 494
BSNT_01326___ 495 TATGATTCTGTTGTATGTGGCGGCGCTGTACTTTAAACTTGTCACGCATC 544
.|||||.||.|||||.|||||.||.||.||.||.||.||.|||||.||.|
RBAM_008150__ 495 CATGATCCTTTTGTACGTGGCAGCTCTTTATTTCAAGCTCGTCACCCACC 544
BSNT_01326___ 545 GGGGCGTTTATCAGCCGAATAATGCC----GCTCAGTCTGAAGAAGAGGA 590
|.||.|||||||||||||||.| ||| ||..|| |||||||||||
RBAM_008150__ 545 GCGGTGTTTATCAGCCGAATCA-GCCGGAGGCAAAG---GAAGAAGAGGA 590
BSNT_01326___ 591 AGAGCCGGAATGGTCAGGGAAGGTTGCGACGATTGTCTTGTTTGCGGCAA 640
..||||.||.|||||.|||||....|||||....|||||.|||....|||
RBAM_008150__ 591 GCAGCCTGAGTGGTCGGGGAAAAGAGCGACAGCCGTCTTATTTATTTCAA 640
BSNT_01326___ 641 CGATTGTGGTTGCATACATATCCGAAAACCTGGTCCATACCTTTCACTCG 690
|.|||.|.||.||.||||||||.||||||||.||||||||.|||||..||
RBAM_008150__ 641 CCATTATCGTCGCCTACATATCTGAAAACCTTGTCCATACGTTTCATGCG 690
BSNT_01326___ 691 GTTGCTGAACAGTTCGGGTGGAGCGAGCTGTTTATCGGGGTCATCATCGT 740
||.||||||||||||||.||||||||||||||||||||.||.||.|||||
RBAM_008150__ 691 GTGGCTGAACAGTTCGGCTGGAGCGAGCTGTTTATCGGAGTGATTATCGT 740
BSNT_01326___ 741 GGCGATTGTAGGAAATGCGGCGGAGCACGCGTCAGCGATTATTATGGCCT 790
.||.||.||.||||||||.||.|||||.|||||.||||||||||||||.|
RBAM_008150__ 741 CGCAATCGTCGGAAATGCCGCAGAGCATGCGTCGGCGATTATTATGGCGT 790
BSNT_01326___ 791 TCAAAAATAAAATGGACATTGCGGTTGAAATTGCAGTCGGCTCTACGCTG 840
.||||.|.||.|||||..|.||.||||||||.||.||.|||||.||..||
RBAM_008150__ 791 ACAAAGACAAGATGGATGTCGCCGTTGAAATCGCGGTAGGCTCGACTTTG 840
BSNT_01326___ 841 CAGATCGCTATGTTTGTCGCACCGGTTCTCGTCATCTGTTCTATCTTTTT 890
||||||||.||||||||.||.||||||||.||.||||||||.||||||||
RBAM_008150__ 841 CAGATCGCCATGTTTGTGGCTCCGGTTCTTGTGATCTGTTCCATCTTTTT 890
BSNT_01326___ 891 TCC-GACAAGCATGCCGCTTGTATTTACATTGCCTGAGCTCGTCGCGATG 939
||| |.||| .||||||||||||||.||||||||.|||||.|||||||||
RBAM_008150__ 891 TCCGGTCAA-TATGCCGCTTGTATTCACATTGCCCGAGCTTGTCGCGATG 939
BSNT_01326___ 940 GTATCAGCGGTTCTCTTGATGATCGCGATTTCGAATGACGGGGATTCCAA 989
.|.|||.|.||.||.|||||||....||||||.||||||||.|||||.||
RBAM_008150__ 940 ATCTCATCCGTCCTTTTGATGACAATGATTTCAAATGACGGTGATTCGAA 989
BSNT_01326___ 990 CTGGTTTGAAGGGGCGACACTGCTTGCTGCATATGTCATTATGGCGATCG 1039
|||||||||||||||.||.||.|||||.||.|||||||||||||||||||
RBAM_008150__ 990 CTGGTTTGAAGGGGCTACGCTCCTTGCCGCTTATGTCATTATGGCGATCG 1039
BSNT_01326___ 1040 GCTTTTTCCTTCTTTAA 1056
|.||||||||.||||||
RBAM_008150__ 1040 GTTTTTTCCTGCTTTAA 1056
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.