Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01291 and RBAM_007920
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_01291___yflE.1.9828.seq
# -bsequence dna-align/RBAM_007920___yflE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01291___yflE-RBAM_007920___yflE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01291___yflE-RBAM_007920___yflE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01291___yflE
# 2: RBAM_007920___yflE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1964
# Identity: 1626/1964 (82.8%)
# Similarity: 1626/1964 (82.8%)
# Gaps: 40/1964 ( 2.0%)
# Score: 6766.0
#
#
#=======================================
BSNT_01291___ 1 ATGAAAACATTTATAAAAGAAAGAGGACTGGCCTTCTTCTTAATCGCGGT 50
|||||||||||||||||||||||||||||.|||||||||||.||.|||||
RBAM_007920__ 1 ATGAAAACATTTATAAAAGAAAGAGGACTTGCCTTCTTCTTGATAGCGGT 50
BSNT_01291___ 51 CGTCCTGTTATGGATCAAAACGTATGTCAGTTATGTCCTGAACTTCAACT 100
|||..|.||.|||.|.|||||.||||||..||||.|..|.|||||.|||.
RBAM_007920__ 51 CGTGTTATTGTGGGTGAAAACATATGTCGCTTATATTTTAAACTTTAACC 100
BSNT_01291___ 101 TAGGAATAGACAACACGATACAAAAAATATTGCTTTTTGTGAATCCTCTT 150
|.||.||||||||||||||.||.|||||||||||||||||||||||.||.
RBAM_007920__ 101 TCGGCATAGACAACACGATCCAGAAAATATTGCTTTTTGTGAATCCGCTG 150
BSNT_01291___ 151 AGCTCAAGCTTGTTCTTTCTTGGCTTTGGAC-TCTTGTTCAAGAAAAAAT 199
|||||.|||||||||||||||||.|||||.| |||| |||||||||||||
RBAM_007920__ 151 AGCTCCAGCTTGTTCTTTCTTGGATTTGGGCTTCTT-TTCAAGAAAAAAT 199
BSNT_01291___ 200 TACAGCAGACAGCCATTATAGTGATTCATTTTTTAATGTCTTTTTTACTG 249
|||||||||||||||||||.|||||||||||||||.||||||||||.||.
RBAM_007920__ 200 TACAGCAGACAGCCATTATTGTGATTCATTTTTTATTGTCTTTTTTGCTT 249
BSNT_01291___ 250 TACGCCAACATTGTGTACTACAGATTTTTCAATGATTTTATTACAATTCC 299
|..||.|||||.||.||.||.|||||.||.||||||||.|||||.||.||
RBAM_007920__ 250 TTTGCAAACATCGTCTATTATAGATTCTTTAATGATTTCATTACCATCCC 299
BSNT_01291___ 300 GGTCATTATGCAGGCTAAAACAAACGGCGGCCAACTCGGTGACAGCGCAT 349
||||||.||||||||.||.|||||.||||||||.|||||.||||||||.|
RBAM_007920__ 300 GGTCATGATGCAGGCAAAGACAAATGGCGGCCAGCTCGGAGACAGCGCGT 349
BSNT_01291___ 350 TTTCGCTGATGAGACCGACTGACGCCTTTTACTTTATCGATACGATCATC 399
|.|||.|.||||||..|||.||||||||.|||||..|.|||||..||||.
RBAM_007920__ 350 TCTCGTTAATGAGATGGACAGACGCCTTCTACTTCCTGGATACCGTCATT 399
BSNT_01291___ 400 CTGATCATCTTGGCGATCAA----AGTAAACAAGCCTGCCGAAACGTCAA 445
.||||.||.|||||..|.|| ||.||| ||.||.|||| ||
RBAM_007920__ 400 TTGATTATTTTGGCCCTTAAGATGAGAAAA----CCGGCTGAAA----AA 441
BSNT_01291___ 446 GC----AAAAAATCGTTCCGAATTATTTTTGCGTCTTCAATTCTTGTGTT 491
.| ||.|||||.|||.||||..||||.||.||..|..|.|||.||||
RBAM_007920__ 442 CCGGCGAAGAAATCATTCAGAATCGTTTTGGCTTCCGCCGTGCTTATGTT 491
BSNT_01291___ 492 CTTGATCAACCTGGCAGTTGCGGAATCAGACCGTCCTGAATTGCTGACAA 541
|.||||||||||.||.||.||||||||.|||||||||||..|..|||||.
RBAM_007920__ 492 CCTGATCAACCTCGCCGTCGCGGAATCCGACCGTCCTGAGCTTTTGACAC 541
BSNT_01291___ 542 GATCATTCGACCGGAACTATCTTGTGAAATACTTGGGAACATACAATTTC 591
|.|||||.|||||.||||||||.||||||||||||||.||.|||||.||.
RBAM_007920__ 542 GCTCATTTGACCGAAACTATCTGGTGAAATACTTGGGCACGTACAACTTT 591
BSNT_01291___ 592 ACGATTTATGACGCTGTACAGAATATCAAGTCCAACAGCCAGCGCGCGCT 641
||||||||.||.||.||.||||||.|.||.||.|||||||||||||||||
RBAM_007920__ 592 ACGATTTACGATGCCGTGCAGAATGTGAAATCAAACAGCCAGCGCGCGCT 641
BSNT_01291___ 642 TGCCGATTCCAGCGACGTGACGGAAGTAGAAAACTACATGAAAGCCAATT 691
|||||||||.|||||.||.|||||.||.||||||||.|||||.|||||.|
RBAM_007920__ 642 TGCCGATTCAAGCGATGTAACGGATGTGGAAAACTATATGAAGGCCAACT 691
BSNT_01291___ 692 ACGATGTGCCGAATAACGTGTATTTCGGCAAAGCGGAAGGAAAAAACGTC 741
|.||.||||||||||||||.||.|||||.|||||.|||||||||||||||
RBAM_007920__ 692 ATGACGTGCCGAATAACGTCTACTTCGGAAAAGCCGAAGGAAAAAACGTC 741
BSNT_01291___ 742 ATTTACGTTTCACTTGAATCTTTGCAGTCATTTATCATCGACTATAAAAT 791
||.|||||.|||.|.||.|||.||||.||.||||||||.|||||||||||
RBAM_007920__ 742 ATCTACGTCTCATTAGAGTCTCTGCAATCCTTTATCATTGACTATAAAAT 791
BSNT_01291___ 792 TGACGGCAAAGAAGTGACACCGTTCTTAAATAAACTGGCACATGATAACG 841
|.|||||||.||||||||.|||||.|||||.||||||||.||.|||||..
RBAM_007920__ 792 TAACGGCAAGGAAGTGACGCCGTTTTTAAACAAACTGGCGCACGATAATC 841
BSNT_01291___ 842 AAACGTTCTACTTTGATAACTTTTTCCACCAAACGGGACAAGGCAAAACA 891
||||.||||||||||||||||||||||||||||||||||||||.||||||
RBAM_007920__ 842 AAACATTCTACTTTGATAACTTTTTCCACCAAACGGGACAAGGTAAAACA 891
BSNT_01291___ 892 TCTGATGCTGAATTTATGATGGAAAACTCTCTGTACCCGCTGGCTCAAGG 941
||||||||.||||||||||||||.|||||||||||||||||..|.|||||
RBAM_007920__ 892 TCTGATGCGGAATTTATGATGGAGAACTCTCTGTACCCGCTTTCGCAAGG 941
BSNT_01291___ 942 TTCAGTTTTCGTAAACAAAGCGCAAAACACGCTGCAATCCGTTCCGGCGA 991
|||.||||||||.||.||||||||||||||||||||.||||||||.||.|
RBAM_007920__ 942 TTCGGTTTTCGTCAATAAAGCGCAAAACACGCTGCAGTCCGTTCCTGCCA 991
BSNT_01291___ 992 TTCT--GAAGTCTAAGAATTACACATCTGCTACTTTCCACGGGAACACGC 1039
||| .|||.| ||.||.|||||.|||||..||||||||||.||.||||
RBAM_007920__ 992 -TCTTAAAAGGC-AAAAAGTACACGTCTGCCGCTTTCCACGGAAATACGC 1039
BSNT_01291___ 1040 AGACGTTCTGGAACCGTAACGAAATGTACAAAGCGGAAGGCATTGATAAA 1089
||||.||||||||||||||||||||||||||||||||||||||.|||||.
RBAM_007920__ 1040 AGACTTTCTGGAACCGTAACGAAATGTACAAAGCGGAAGGCATCGATAAG 1089
BSNT_01291___ 1090 TTCTTTGATTCTGCCTACTATGACATGAACGAAGAAAACACGAAAAACTA 1139
||.||.|||||.||.||.||||||||||.|||||||||||||||||||||
RBAM_007920__ 1090 TTTTTCGATTCCGCTTATTATGACATGAGCGAAGAAAACACGAAAAACTA 1139
BSNT_01291___ 1140 CGGCATGAAAGACAAACCGTTCTTCAAAGAATCAATGCCGCTGCTGGAA- 1188
||||||||||||.|||||||..|||||||||||.|||||||| ||..||
RBAM_007920__ 1140 CGGCATGAAAGATAAACCGTATTTCAAAGAATCCATGCCGCT-CTTAAAG 1188
BSNT_01291___ 1189 AGCCTGCCGCAGCCGTTCTATACGAAGTTCATTACCCTGTCCAACCACTT 1238
|||||||||||||||||||||||||||||||||||.||||||||||||||
RBAM_007920__ 1189 AGCCTGCCGCAGCCGTTCTATACGAAGTTCATTACGCTGTCCAACCACTT 1238
BSNT_01291___ 1239 CCCATTCGGAATGGATGAGGGAGATACAGACTTCCCGGCTGGAGACTTTG 1288
|||.||||||||||||.|.|.|||.||.|||||||||||.||||||||||
RBAM_007920__ 1239 CCCGTTCGGAATGGATAAAGAAGACACGGACTTCCCGGCGGGAGACTTTG 1288
BSNT_01291___ 1289 GTGACTCTGTCGTCGATAACTACTTCCAGTCAGCCCATTACCTTGATCAG 1338
|.||.||.|||||..||||.|||||||||||.||..|.||.||.|||.|.
RBAM_007920__ 1289 GCGATTCAGTCGTTAATAATTACTTCCAGTCCGCGAACTATCTGGATGAA 1338
BSNT_01291___ 1339 TCCATTGAACAATTCTTCAATGACCTGAAAAAAGACGGGTTATATGATAA 1388
||.||||||||.|||||..|||||||||||||||||||..|.||.|||||
RBAM_007920__ 1339 TCAATTGAACAGTTCTTTCATGACCTGAAAAAAGACGGCCTGTACGATAA 1388
BSNT_01291___ 1389 ATCGATTATTGTGATGTACGGAGACCACTACGGCATCTCTGAAAACCACA 1438
.||||||||.|||||||||||||||||||||||||||||.||||||||.|
RBAM_007920__ 1389 GTCGATTATCGTGATGTACGGAGACCACTACGGCATCTCCGAAAACCATA 1438
BSNT_01291___ 1439 ATAAAGCGATGGCGAAAGTGCTTGGCAAGGATGAAATCACTGATTACGAC 1488
||||||||||||||||||||||.|||||.|||||.||||||||.||||||
RBAM_007920__ 1439 ATAAAGCGATGGCGAAAGTGCTCGGCAAAGATGAGATCACTGAATACGAC 1488
BSNT_01291___ 1489 AATGCCCAGCTTCAACGGGTGCCGCTCTTTATCCACGCTGCCGGCGTGAA 1538
||||||||||||||.||||||||||||||||||||||||.||||||||||
RBAM_007920__ 1489 AATGCCCAGCTTCAGCGGGTGCCGCTCTTTATCCACGCTCCCGGCGTGAA 1538
BSNT_01291___ 1539 GGGCG--AGAAAGTTCATAAATATGCCGGAGACGTTGATGTGGCTCCTAC 1586
.|||| .|.|| |||.||||.||||||.||.||.|||||.||.||.||
RBAM_007920__ 1539 AGGCGGCCGTAA--TCACAAATTTGCCGGTGAAGTCGATGTCGCGCCGAC 1586
BSNT_01291___ 1587 CATTCTGCATCTGCTCGGAGTGGATACGAAGGACTATCTGATGTCCGGTT 1636
|.||||.|||||||||||.||.||||||||.||.|||||.|||||.||||
RBAM_007920__ 1587 CGTTCTTCATCTGCTCGGCGTCGATACGAAAGATTATCTCATGTCAGGTT 1636
BSNT_01291___ 1637 CTGATATTTTATCGAAAGAACACCGTGAAGTGATTCCGTTCCGCAACGGA 1686
|.|||||.|||||||||||.|||.|.|||||.|||||||||||.||||||
RBAM_007920__ 1637 CAGATATCTTATCGAAAGAGCACAGAGAAGTCATTCCGTTCCGTAACGGA 1686
BSNT_01291___ 1687 GACTTTATTTCACCGAAGTACACGAAAATATCCGGTAAGTATTACGACAC 1736
|||||.||.||||||||.||.||||||.|.|||||.|||||||||||.||
RBAM_007920__ 1687 GACTTCATCTCACCGAACTATACGAAAGTGTCCGGCAAGTATTACGATAC 1736
BSNT_01291___ 1737 GAAAACCGGAAAAGAACTCGATGAATCCGAAGTCGACAAGTCAGAAGACT 1786
|||||||||||.|....|.|||||.||.|||||||||||...||||||||
RBAM_007920__ 1737 GAAAACCGGAAGACTTTTAGATGATTCAGAAGTCGACAAAAAAGAAGACT 1786
BSNT_01291___ 1787 CGCTCGTCAAGAAGGAACTTGAAATGTCCGATAAAATCATAAACGGAGAC 1836
|.||||||||||..||.|||||||||||.|||||.|||||.|||||.||.
RBAM_007920__ 1787 CTCTCGTCAAGACTGAGCTTGAAATGTCTGATAAGATCATCAACGGCGAT 1836
BSNT_01291___ 1837 CTGCTGCGGTTCTACGAGCCGAAAGGTTTTAAGAAGGTGAATCCTTCTGA 1886
|||||.||.|||||..||||||||||.||||||||.|||.|||||||..|
RBAM_007920__ 1837 CTGCTTCGTTTCTATCAGCCGAAAGGCTTTAAGAAAGTGGATCCTTCACA 1886
BSNT_01291___ 1887 TTATGATTACACAAAACATGACGAAGATTCTTCCGAAACGTCAAAGGATA 1936
.|..|||||.||.||.|.| ||||||||.||.| ||.|.|||.
RBAM_007920__ 1887 ATTCGATTATACGAAGCGT---GAAGATTCCTCAG------CAGATGATC 1927
BSNT_01291___ 1937 ACGAAGATAAATAA 1950
|..||| |||||
RBAM_007920__ 1928 AAAAAG---AATAA 1938
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