Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01290 and RBAM_007900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_01290___nagP.1.9828.seq
# -bsequence dna-align/RBAM_007900___nagP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01290___nagP-RBAM_007900___nagP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01290___nagP-RBAM_007900___nagP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01290___nagP
# 2: RBAM_007900___nagP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1397
# Identity: 1049/1397 (75.1%)
# Similarity: 1049/1397 (75.1%)
# Gaps: 52/1397 ( 3.7%)
# Score: 3927.5
#
#
#=======================================
BSNT_01290___ 1 ATGCTTTCATTTTTACAAAAACTCGGGAAGTCATTTATGCTCCCGATTGC 50
||||||..||||||.|||||||||||.||.|||||||||||.||||||||
RBAM_007900__ 1 ATGCTTCAATTTTTGCAAAAACTCGGAAAATCATTTATGCTTCCGATTGC 50
BSNT_01290___ 51 GGTTCTGCCTGCGGTTGGAATTATCCTTGCGCTTGGCAGAGAGGATGTAT 100
.||||||||.||.|||||.|||||..|.||..|.|||||||||||..|||
RBAM_007900__ 51 CGTTCTGCCCGCCGTTGGTATTATTTTGGCCATCGGCAGAGAGGACTTAT 100
BSNT_01290___ 101 TTAATATCCCGTTTGTCTATCAGGCGGGGACGGCGGTTTTTGATCATCTG 150
|.|||||.|||||..|.||...|||||||||.|||||.||||||||||||
RBAM_007900__ 101 TAAATATTCCGTTCATTTACGCGGCGGGGACCGCGGTATTTGATCATCTG 150
BSNT_01290___ 151 CCGCTTATTTTTGCGATCGGAATTGCCATCGGCATTTCAAAAGACAGCAA 200
|||||.|||||.|||||||||||.||.|||||.|||||.|||||||||||
RBAM_007900__ 151 CCGCTGATTTTCGCGATCGGAATCGCGATCGGGATTTCGAAAGACAGCAA 200
BSNT_01290___ 201 TGGGGCCGCGGGTTTATCAGGGGCGATATCGTATCTGATGCTTGACGCGG 250
.||||||||.|.|.|.||.||.||.||.||.|||.|.|||||.|||||||
RBAM_007900__ 201 CGGGGCCGCCGCTCTGTCGGGAGCAATTTCTTATATCATGCTGGACGCGG 250
BSNT_01290___ 251 CTACAAAGACAATTGATAAAACAAATAACATGGCGGTGTTTGGGGGAATT 300
||..|||..||||..||...||||||||.|||||.||.||.||.||.|||
RBAM_007900__ 251 CTGTAAAATCAATCAATTCGACAAATAATATGGCCGTTTTCGGAGGGATT 300
BSNT_01290___ 301 ATTGCCGGTTTAATTGCCGGTTACACCTATAACCGCTTCAAGGATACCAA 350
||.||.||.||||||||.||.|||||.|||||.|||||.||||||||.||
RBAM_007900__ 301 ATCGCGGGGTTAATTGCGGGATACACGTATAATCGCTTTAAGGATACGAA 350
BSNT_01290___ 351 GCTGCCTGAATATCTCGGATTTTTCAGTGGCAGACGGCTTGTGCCGATTA 400
||||||.|||||||||||.||||||||.||..|..||||.||.||||||.
RBAM_007900__ 351 GCTGCCCGAATATCTCGGGTTTTTCAGCGGGCGCAGGCTCGTTCCGATTG 400
BSNT_01290___ 401 TAACAGCCATTATTACGATCATTTTAGCGGGCATATTCGGAGTCGTCTGG 450
||||.||..|.|||||.||.|||||.|||||.||.||||||.|.||.|||
RBAM_007900__ 401 TAACGGCGCTGATTACCATTATTTTGGCGGGGATCTTCGGATTTGTGTGG 450
BSNT_01290___ 451 CCGCCGATTCAATCTTGT-ATCAACTCGTTTGGAGAGTGGATGCTCGGGC 499
|||||||||||.|| .|| ||.|..||.||.||.||.||||||.||||||
RBAM_007900__ 451 CCGCCGATTCAGTC-GGTGATTACGTCTTTCGGGGAATGGATGATCGGGC 499
BSNT_01290___ 500 TCGGCGGCATCGGGGCAGGCATATTCGGCCTTTTCAACAGGCTGTTAATT 549
|.|||||.|||||.||.||.||.|.|||..||||.|||.||||.||.|||
RBAM_007900__ 500 TTGGCGGAATCGGCGCCGGGATTTACGGGATTTTTAACCGGCTTTTGATT 549
BSNT_01290___ 550 CCGCTTGGCCTTCACCATGTACTGAACAATATTTTCTGGTTCCAATTTGG 599
||..|.||.|||||.|||||.|||||.||||||||.||||||||.|||||
RBAM_007900__ 550 CCATTCGGTCTTCATCATGTGCTGAATAATATTTTTTGGTTCCAGTTTGG 599
BSNT_01290___ 600 AGAATATAACGGAGTGACAGGGGATCTGGCGCGCTTTTTCGCGAAAGATC 649
.||.|.|.|||||...||.||.||||||||.|||||.||.||||||||||
RBAM_007900__ 600 CGATTTTCACGGAAAAACGGGAGATCTGGCCCGCTTCTTTGCGAAAGATC 649
BSNT_01290___ 650 CGACAGCGGGCACATATATGACGGGATTCTTCCCAATCATGATGTTCGGT 699
||||.|||||.||.||||||||||||||||||||.||.|||||||||||.
RBAM_007900__ 650 CGACGGCGGGAACTTATATGACGGGATTCTTCCCGATTATGATGTTCGGG 699
BSNT_01290___ 700 CTTCCGGCGGCGTGTCTGGCTATGGTTGTGACTGCGAAGCCGTCTAAACG 749
||||||||.||.||||||||.|||.|||...|.||.|||||...|||.||
RBAM_007900__ 700 CTTCCGGCCGCATGTCTGGCAATGATTGCCGCGGCTAAGCCAAGTAAGCG 749
BSNT_01290___ 750 GAAAGCGACGGCTGGGATGATGATTGGGTTTGCTTTAACGGCGTTTATCA 799
.|||||||||||.||.||||||||.||..|.||..|.|||||.|||||.|
RBAM_007900__ 750 CAAAGCGACGGCCGGAATGATGATCGGTCTCGCGCTGACGGCATTTATTA 799
BSNT_01290___ 800 CAGGGATTACGGAGCCGATTGAGTTTGCATTTATGTTTTTATCTCCGCTT 849
|.||.|||||.|||||||||||.||||||||||||||||||||.||||||
RBAM_007900__ 800 CCGGAATTACAGAGCCGATTGAATTTGCATTTATGTTTTTATCACCGCTT 849
BSNT_01290___ 850 TTATACGCTGTTCACGCGGTCTTAACCGGGTTATCTTTATTTATCGTCAA 899
||.||||..|||||.||..|.|||||||||||.||||||||||||||.||
RBAM_007900__ 850 TTGTACGGGGTTCATGCTATATTAACCGGGTTCTCTTTATTTATCGTGAA 899
BSNT_01290___ 900 CTG-GCTCGGCATCCGCTCAGGCTTCTCTTTTTCAGCCGGAGCTATCGAT 948
|| .|||||.|||.|.|||||.||.||.||.||.||.||.||.||||||
RBAM_007900__ 900 -TGTTCTCGGAATCAGGTCAGGTTTTTCATTCTCGGCGGGGGCGATCGAT 948
BSNT_01290___ 949 TATGTGCTCAGCTATGGAATCGCGGAAAAACCGCTGCTTCTGCTTTTGGT 998
|||.|.||||||||.||.||.||.|||||||||||..|.|||||..|.||
RBAM_007900__ 949 TATCTCCTCAGCTACGGCATTGCCGAAAAACCGCTTTTGCTGCTCGTTGT 998
BSNT_01290___ 999 AGGTATATGCTATGCAGCGGTATACTTTATCGTGTTTTATGTACTGATTA 1048
.||..|.||.|||||||.|.|.||.|||.||||.||.|||.|.||.||.|
RBAM_007900__ 999 CGGGCTTTGTTATGCAGTGATCTATTTTGTCGTCTTCTATATGCTCATCA 1048
BSNT_01290___ 1049 AGGCTTTGAATTTAAAAACGCCTGGACGGGAAGACGAT---GATGTGGAT 1095
|..|.||.||.||.||||||||.|||||||||||.||| ||.|.|||.
RBAM_007900__ 1049 AAACGTTAAACTTGAAAACGCCGGGACGGGAAGATGATGAGGAAGAGGAA 1098
BSNT_01290___ 1096 GAAGTGCTGGATGAAAATA----CTGTTCAG--GATGTAAATGAAAACAT 1139
||||||||...||||.||| |.||||.| || |.|||||
RBAM_007900__ 1099 GAAGTGCTTAGTGAAGATACGGCCGGTTCCGTCGA--------AGAACAT 1140
BSNT_01290___ 1140 --CATGCTGAAAGGGCTCGGCGGAAAAGAAAACCTTCAAACCATTGATCA 1187
||||||.||.|||||||||||.|...|||||||..||||.||||||||
RBAM_007900__ 1141 GCCATGCTCAAGGGGCTCGGCGGCAGGCAAAACCTCGAAACGATTGATCA 1190
BSNT_01290___ 1188 TTGCGCCACAAGGCTGCGACTGACTGTGAAGGATACCGCTTTGGTGGATG 1237
.||.||.||..|.||..|.|||||.|||.|||||||..||.|..|..|||
RBAM_007900__ 1191 CTGTGCGACCCGCCTCAGGCTGACCGTGCAGGATACGTCTCTCATTAATG 1240
BSNT_01290___ 1238 AAGCGCTGCTAAAGAAAGCAGGCGCAAAAGGGGTTGTCAAATCGGGCGGG 1287
|||||..|||.||.|||||.||.||||||||||||.||||| .||||
RBAM_007900__ 1241 AAGCGGCGCTTAAAAAAGCGGGAGCAAAAGGGGTTATCAAA----ACGGG 1286
BSNT_01290___ 1288 CAAT----CGGTTCAAGTCATTATTGGCCCGAATGTGGAATTTGCAGCTG 1333
.||| |||..||.||||||||.||.|||||.||.|||||||..||.|
RBAM_007900__ 1287 GAATAAAACGGCGCAGGTCATTATCGGGCCGAACGTCGAATTTGTCGCGG 1336
BSNT_01290___ 1334 AGGAATTGAGGGCTGCTGTC--------AAATAA------------- 1359
|.||..||||.|..||.||| ..||.|
RBAM_007900__ 1337 AAGAGCTGAGAGAAGCCGTCCGCCTTGACGATCAGAAGCAGACTTGA 1383
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