Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01285 and RBAM_007860

See Amino acid alignment / Visit BSNT_01285 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence dna-align/BSNT_01285___yflJ.1.9828.seq
#    -bsequence dna-align/RBAM_007860___yflJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01285___yflJ-RBAM_007860___yflJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01285___yflJ-RBAM_007860___yflJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01285___yflJ
# 2: RBAM_007860___yflJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:     111/138 (80.4%)
# Similarity:   111/138 (80.4%)
# Gaps:           3/138 ( 2.2%)
# Score: 448.0
# 
#
#=======================================

BSNT_01285___      1 ATGCATTACGGCAGTAAAGGCTGGTATGTGGCAGAACTAAAAAAGCAGGG     50
                     ||||||||.||||||||||||||||||||.|.|||..||||.||..|.||
RBAM_007860__      1 ATGCATTATGGCAGTAAAGGCTGGTATGTAGAAGAGTTAAAGAAAAAAGG     50

BSNT_01285___     51 GATCACGCACCATGAGGGAAGAAAGCTTCAAAGCTATAAAACCTATTTTC    100
                     .||.||.|||.||||.|||||||||||||||||||..||||..||.||.|
RBAM_007860__     51 AATTACCCACTATGAAGGAAGAAAGCTTCAAAGCTTCAAAAAGTACTTCC    100

BSNT_01285___    101 TTGCCAACCTGCTTGAAACAAAGAAAAAACAATCTTAA    138
                     |||||||.|||||.||||||   |||||||||.|.|||
RBAM_007860__    101 TTGCCAATCTGCTGGAAACA---AAAAAACAAGCATAA    135


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