Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01283 and RBAM_007850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_01283___yflK.1.9828.seq
# -bsequence dna-align/RBAM_007850___yflK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01283___yflK-RBAM_007850___yflK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01283___yflK-RBAM_007850___yflK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01283___yflK
# 2: RBAM_007850___yflK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 709
# Identity: 459/709 (64.7%)
# Similarity: 459/709 (64.7%)
# Gaps: 92/709 (13.0%)
# Score: 1322.5
#
#
#=======================================
BSNT_01283___ 1 ATGAAACCAGAGCGCTATTCAGTTCTT-TCTCTTAATCTGGGAAA-ACCG 48
.|||..|.||| ||.|||.| |||| |||.|.|||||.||||| .|||
RBAM_007850__ 1 GTGACGCAAGA---CTGTTCTG-TCTTATCTATCAATCTCGGAAAGCCCG 46
BSNT_01283___ 49 CAGACGCTTGAATATGACGGAAAGA-AAATCGAAACCGGCATCATGAAGC 97
|| |..|.|||||.||.||| .||| |||||.|..||||||||||.||||
RBAM_007850__ 47 CA-ATTCATGAATTTGCCGG-CAGACAAATCAATTCCGGCATCATAAAGC 94
BSNT_01283___ 98 GGCCGGCTGAATCAGCCGTCATGCTGTATCGGGAGA----ATTTTGAAGG 143
||||.||.||.||..|||||||||||||| |.| |||||||.||
RBAM_007850__ 95 GGCCCGCAGATTCTCCCGTCATGCTGTAT----AAAACCCATTTTGACGG 140
BSNT_01283___ 144 AGACGGACAGGCGGACCT----CGTCAACCACGGCGGACCTGATAAGGCT 189
.|||||.||.||.|||.| | |.|||||.||.||.|||||.||.
RBAM_007850__ 141 GGACGGGCAAGCCGACTTGAAGC----ATCACGGAGGCCCCGATAAAGCG 186
BSNT_01283___ 190 GTCTGTGTCTACCCGGCGGAGCATTATCCGTTTTGGGAA-----GAGTTC 234
||.||.||.||.||.||.|||||||||.|.|.||||||| |
RBAM_007850__ 187 GTGTGCGTGTATCCCGCCGAGCATTATTCATATTGGGAAACAACG----- 231
BSNT_01283___ 235 CTCTCAAGA-------CCGCTGTCAAATGCCGCATTTGGAGAAAATCTGA 277
|||.|.||| |||| .|||||.||.||.||.|||.|.|
RBAM_007850__ 232 CTCGCGAGAAAACTTCCCGC-------CGCCGCGTTCGGGGAGAATGTAA 274
BSNT_01283___ 278 CGGTCGCGGGCCTGACTGAGGAGAATGTTTGCATCGGGGATGT-GTTCAG 326
|||||...||.|||.|.||..|..|.||.||.|||||.||.|| .||||
RBAM_007850__ 275 CGGTCAAAGGACTGGCCGAACAAGACGTGTGGATCGGAGACGTCTTTCA- 323
BSNT_01283___ 327 GCTTGATGAAGCTGTTGTTCAGGTCAGCCAGCCGCGCCAGCCGTGTGTAA 376
|||.|..|||||.||.|||||.||.|||||||||||||||||.||.||.|
RBAM_007850__ 324 GCTGGGGGAAGCCGTCGTTCAAGTAAGCCAGCCGCGCCAGCCCTGCGTCA 373
BSNT_01283___ 377 AGCTGGCGAAAAAGTTTGGTGTAAAAGAAATGGTGCTGAAGGTCCAGCAA 426
|.||.|||...||.|.|||..|.|||||.||||||||....||.|||||.
RBAM_007850__ 374 AACTCGCGCTCAAATATGGCATCAAAGATATGGTGCTCCGTGTACAGCAG 423
BSNT_01283___ 427 ACCGGCTATACAGGGTTTTATTTTCGCGTGCTGGAGGAGGGCAGG--GTG 474
||.||.|.|||.||.||||||||..|.|||||.||.|| ||| .||
RBAM_007850__ 424 ACGGGATTTACCGGCTTTTATTTCAGGGTGCTTGAAGA----AGGATATG 469
BSNT_01283___ 475 TC--------TCCCGGCGCGAACCTTGAATTGCTGTCCAGAGG-AGAGAA 515
|| |||||.|...||.|.| |||||.||||| |.||||
RBAM_007850__ 470 TCGATCCGCGTCCCGTCCTCAAGCGT------CTGTCGAGAGGAAAAGAA 513
BSNT_01283___ 516 GGGCATCTCCGTCCAGTTCGCCAACCGCA-TCAACTACCATGAT----GC 560
.||||.||||||..||..||.|| .|.| |.||.||.|.|||| ||
RBAM_007850__ 514 -AGCATTTCCGTCTGGTATGCGAA-TGAAGTGAAATATCGTGATTCCGGC 561
BSNT_01283___ 561 AAAAAATCTCACCGCCATAGAACTGATTTTAAGTGAGGCTGCACTATCGG 610
|||||..|.||.||.|||...||..|..|.||.|..||.||.||.|
RBAM_007850__ 562 ----AATCTGTCAGCGATTGAAGAAATACTGCGGGAAGAAGCGCTGTCAG 607
BSNT_01283___ 611 AAAGCTGGAGAGCGTCCTTTATGAAAAAGAAG-GACAGGCTGCTGCCGGT 659
||||||||||.|.||||||..|.||||| ||| |||||||| |..|
RBAM_007850__ 608 AAAGCTGGAGGGAGTCCTTCCTTAAAAA-AAGAGACAGGCT-----CACT 651
BSNT_01283___ 660 --TGAATAG 666
||.||||
RBAM_007850__ 652 AATGTATAG 660
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