Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01280 and RBAM_007830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_01280___yflM.1.9828.seq
# -bsequence dna-align/RBAM_007830___yflM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01280___yflM-RBAM_007830___yflM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01280___yflM-RBAM_007830___yflM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01280___yflM
# 2: RBAM_007830___yflM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1115
# Identity: 829/1115 (74.3%)
# Similarity: 829/1115 (74.3%)
# Gaps: 46/1115 ( 4.1%)
# Score: 3057.5
#
#
#=======================================
BSNT_01280___ 1 TTGGAAGAAAAAGAAATACTCTGGAACGAAGCGAAAGCGTTTATTGCCGC 50
|||.||.|.|..||||||||.|||.|.||.|||||.|..|||||||..|.
RBAM_007830__ 1 TTGAAACATACGGAAATACTTTGGGATGAGGCGAAGGATTTTATTGATGT 50
BSNT_01280___ 51 ATGCTATCAGGAATTGGGAAAGGAGGAGGAAGTGAAAGACCGTCT----- 95
.||||||||||||.|.||||.|||...|.||.|.||.|..|||||
RBAM_007830__ 51 CTGCTATCAGGAACTCGGAATGGAATCGCAAATCAACGCGCGTCTGCACG 100
BSNT_01280___ 96 CGAGGACATTAAAAG-TGAAATTGACCTGACCGGGAGCTATGTACATACG 144
||| |||||| |||.||.||.|.|||.||.||.||.||.||||||
RBAM_007830__ 101 CGA------TAAAAGATGAGATAGATCGGACGGGAAGTTACGTCCATACG 144
BSNT_01280___ 145 AAGGAAGAGCTAGAGCACGGAGCGAAAATGGCTTGGAGAAACAGCAACCG 194
..|||||||||.||.|||||.|||||||||||.|||.|.|||||||||||
RBAM_007830__ 145 GCGGAAGAGCTTGAACACGGGGCGAAAATGGCGTGGCGCAACAGCAACCG 194
BSNT_01280___ 195 CTGCATCGGCAGATTGTTCTGGAATTCGCTGAATGTTATTGACAGACGAG 244
|||.|||||..|..||||||||.|.||||||||.||.||||||.|.||
RBAM_007830__ 195 CTGTATCGGGCGTCTGTTCTGGCAATCGCTGAACGTCATTGACCGGCG-- 242
BSNT_01280___ 245 ACGTCCGG-------ACGAAGGAGGAAGTGCGTGACGCCCTCTTTCACCA 287
||| |||||.||.||.|||||.|||||..|.|||.|.||
RBAM_007830__ 243 -----CGGTGTGAACACGAAAGAAGAGGTGCGCGACGCATTATTTGAACA 287
BSNT_01280___ 288 TATTGAAACCGCCACCAATAACGGCAAAATCAGACCGACCATTACGATTT 337
||||||||.||||||.||...|||.|||||.|.||||||.||||||||||
RBAM_007830__ 288 TATTGAAATCGCCACGAACGGCGGAAAAATTAAACCGACGATTACGATTT 337
BSNT_01280___ 338 TCCCTCCGGAAGAGAAGGGTGAAAAGCAAGTCGAGATCTGGAATCATCAG 387
|||||||.||..||||.||.||.||||||||.||.|||||||||||.|||
RBAM_007830__ 338 TCCCTCCTGAGAAGAATGGGGAGAAGCAAGTGGAAATCTGGAATCACCAG 387
BSNT_01280___ 388 CTGATCCGGTACGCTGGATATGAGTCAGACGGAGAAAGAATCGGCGACCC 437
||.|||||.||.||.|||||||||.|.||...||.||||.||||.||.||
RBAM_007830__ 388 CTCATCCGCTATGCGGGATATGAGACTGAAAAAGGAAGAGTCGGTGATCC 437
BSNT_01280___ 438 GGCTTCCTGTTCCCTGACAGCAGCCTGCGAAGAGCTCGGCTGGCGCGGAG 487
|||.||.|.|...|||||.||.|.|||||||.|.||||||||||||||..
RBAM_007830__ 438 GGCATCATATGAGCTGACGGCTGTCTGCGAAAAACTCGGCTGGCGCGGGA 487
BSNT_01280___ 488 AGCGAACGGATTTTGACCTGCTGCCGCTCATTTTTCGCATGAAAGGCGAC 537
||||.||.||||||||..|.||||||||..||||.||.||||||||.|||
RBAM_007830__ 488 AGCGGACCGATTTTGATATTCTGCCGCTGCTTTTCCGGATGAAAGGGGAC 537
BSNT_01280___ 538 GAACAGCCTGTCTGGTATGAGCTGCCGCGTTCA----CTTGTGATCGAGG 583
|..|||||.|||||||||||.||||| ||| ||.||||..||.|
RBAM_007830__ 538 GGGCAGCCGGTCTGGTATGACCTGCC----TCAGACGCTCGTGAAAGAAG 583
BSNT_01280___ 584 TTCCAATCATACATCCGGACATCGAGGCGTTTGCTGATTTGGAGCTGAAG 633
|.||.||||..||||||||.||.||.|.||||||.|||||..|.||.|..
RBAM_007830__ 584 TGCCGATCACCCATCCGGATATTGAAGAGTTTGCCGATTTAAATCTCAGA 633
BSNT_01280___ 634 TGGTACGGCGTGCCTATCATCTCTGATATGAAGCTTGAGGTCGG-GGGCA 682
||||||||.||.||.||.|||.|.|||||||.||||||..|||| ||||.
RBAM_007830__ 634 TGGTACGGGGTTCCGATTATCGCCGATATGAGGCTTGAAATCGGCGGGCT 683
BSNT_01280___ 683 TTCATTATAATGCCGCGCCATTTAACGGCTGGTATATGGGCACGGAGATC 732
.|| .||.||.||.|||||.||||||||.|||||||||||.||.||.|||
RBAM_007830__ 684 GTC-GTACAACGCGGCGCCTTTTAACGGATGGTATATGGGAACCGAAATC 732
BSNT_01280___ 733 GGAGCGAGAAACCTCGCAGATGAAAAGCGGTACGACAAGCTGAAAAAAGT 782
||.||.||.|||||.||.||.|||||.|||||.||.|.|||.|||||||.
RBAM_007830__ 733 GGCGCAAGGAACCTTGCTGACGAAAAACGGTATGATATGCTCAAAAAAGC 782
BSNT_01280___ 783 AGCGTCCGTGATCGGCATCGCCG-----CTGATTACAATACGGATTTATG 827
.||..|.||.||.||.||..||| ||| |||||.||..||||
RBAM_007830__ 783 CGCTGCAGTCATGGGGATTTCCGCCAGCCTG-----AATACCGACCTATG 827
BSNT_01280___ 828 GAAGGATCAAGCGCTAGTTGAATTGAATAAAGCTGTGCTGCACTCGTATA 877
|||.|||||.|.|||.||.|||.|||||||.||.|||||..|.||.||.|
RBAM_007830__ 828 GAAAGATCAGGTGCTGGTGGAACTGAATAAGGCAGTGCTCTATTCATACA 877
BSNT_01280___ 878 AAAAGCAGGGTGTCAGCATCGTTGACCATCATACAGCGGCAAGCCAGTTT 927
||||.||.|||||||||||.||.||.||.|||||.|||||.|..||.|||
RBAM_007830__ 878 AAAAACACGGTGTCAGCATTGTCGATCACCATACGGCGGCGAATCAATTT 927
BSNT_01280___ 928 AAACGGTTTGAAGAACAGGAGGAAGAAGCGGGCAGAAAGCTGACGGGAGA 977
|||||.||||||||||||||..||||.||||||||||||||||||||.||
RBAM_007830__ 928 AAACGCTTTGAAGAACAGGAACAAGACGCGGGCAGAAAGCTGACGGGCGA 977
BSNT_01280___ 978 CTGGACGTGGCTGATTCCGCCAATTTCACCCGCTGCCACTCATATCTTCC 1027
||||||.||||||||||||||.||.||.||.|||.||||.||.||.||||
RBAM_007830__ 978 CTGGACCTGGCTGATTCCGCCGATCTCGCCGGCTTCCACCCACATTTTCC 1027
BSNT_01280___ 1028 ACCGCTCCTATGATAACTCAATCGTTAAGCCGAACTATTTTTATCAAGAT 1077
|....||.|||||.||..|.||.||.||||||||.||||.||||||.||.
RBAM_007830__ 1028 ATAAATCATATGACAATACGATTGTGAAGCCGAATTATTATTATCAGGAC 1077
BSNT_01280___ 1078 AAGCCTTATGAGTAA 1092
|||||||||.|||||
RBAM_007830__ 1078 AAGCCTTATCAGTAA 1092
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