Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01275 and RBAM_007790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:57
# Commandline: needle
# -asequence dna-align/BSNT_01275___citT.1.9828.seq
# -bsequence dna-align/RBAM_007790___citT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01275___citT-RBAM_007790___citT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01275___citT-RBAM_007790___citT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01275___citT
# 2: RBAM_007790___citT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 699
# Identity: 494/699 (70.7%)
# Similarity: 494/699 (70.7%)
# Gaps: 36/699 ( 5.2%)
# Score: 1633.5
#
#
#=======================================
BSNT_01275___ 1 TTGATTCACATCGCGATTGCGGAGGATGATTTTCGAGTTGCGCAAATCCA 50
.|||||.|||||||||||||.|||||.||.||||||.|.||||||||.||
RBAM_007790__ 1 GTGATTAACATCGCGATTGCAGAGGACGACTTTCGAATAGCGCAAATTCA 50
BSNT_01275___ 51 TGAGAGATTGATTAAACAGCTTGATGGATTCAAGATTATCGGCAAGGCGG 100
.||.|.|||.||..||||.||||||||||||||..|.||||||||.||..
RBAM_007790__ 51 CGAAAAATTTATCGAACATCTTGATGGATTCAATGTCATCGGCAAAGCAA 100
BSNT_01275___ 101 CTAACGCAAAAGAGACATTGGCGCT-TTTGAAGGAACACAAGGTTGATTT 149
..||.||.|||||.||..|..|||| .||| ||.|||...||..||||.|
RBAM_007790__ 101 TCAATGCCAAAGACACCATATCGCTGCTTG-AGAAACGGCAGCCTGATCT 149
BSNT_01275___ 150 GCTTCTGCTGGATATTTATATGCCGGACGAGCTTGGGACCGCGTTGATTC 199
|||.||..|||||||||||||||||||.|||||.||.||.|...||.|||
RBAM_007790__ 150 GCTGCTTTTGGATATTTATATGCCGGATGAGCTGGGAACAGATCTGCTTC 199
BSNT_01275___ 200 CTGATATACGAAGCCGATTTCCTGAAGTGGACATTATGATTATCACAGCG 249
|...|||.||..||||.||||||...||.||.||.||.|||||.||.||.
RBAM_007790__ 200 CCCTTATCCGCGGCCGTTTTCCTTCTGTTGATATCATCATTATTACGGCT 249
BSNT_01275___ 250 GCAACAGAAACCCGGCATTTGCAGGAAGCGCTAAGAGCAGGAATTGCCCA 299
.|..|.|||||..|.|...|||||||||||||.|||.||||..||.||||
RBAM_007790__ 250 TCTGCCGAAACAAGACTGCTGCAGGAAGCGCTCAGATCAGGCGTTTCCCA 299
BSNT_01275___ 300 CTATTTGATCAAACCCGTAACGGCTGACAAGTT--CAGGCAGGTGCTGCT 347
||||.|.||.||.||.||..||||..|.||.|| ||| |.|||||..|
RBAM_007790__ 300 CTATGTCATAAAGCCGGTGTCGGCACATAAATTTACAG--AAGTGCTTTT 347
BSNT_01275___ 348 TCAGTATAAAGAAAAAAG-GAA--GCTGCTCATGTCTCAGCCGGAGGTCA 394
.|||||....|||||||| ||| |||||.| ||.|||||||||.|.|
RBAM_007790__ 348 GCAGTACCGGGAAAAAAGAGAATGGCTGCAC---TCACAGCCGGAGCTGA 394
BSNT_01275___ 395 GCCAATCCATGATCGACCATATTTTTGGGAA-----CAGTGTG----AAG 435
||||.||..|.||||| |||.|||||.|||| |||...| ||.
RBAM_007790__ 395 GCCAGTCTGTTATCGA-CATGTTTTTCGGAAGCGGTCAGAAAGAACAAAA 443
BSNT_01275___ 436 ACAGCTTTGCCGGCAGAGGATTTGCCGACTGGCATTAATTCGATTACACT 485
|||||| || |.|||.|||||||.||.|||||||||||||||||
RBAM_007790__ 444 ACAGCT-------CA-ATGATCTGCCGACCGGGATTAATTCGATTACACT 485
BSNT_01275___ 486 GCGAAAAATTAAGGAAGCGCTTCAG---ACTGCGTCAGAAGGATTGACAG 532
.|.||||||.||..|.|||| |||| | ||...|.||||..||||.|
RBAM_007790__ 486 TCAAAAAATCAAAAACGCGC-TCAGGGAA--GCCCAAAAAGGGATGACGG 532
BSNT_01275___ 533 CGGAGGAACTTGGGGAAAAAATGGGGGCGTCACGAACAACTGCCCGCCGT 582
|.||.|||||.||.|||||||||||.||.||..|||||||.||.||.||.
RBAM_007790__ 533 CCGAAGAACTGGGCGAAAAAATGGGCGCCTCCAGAACAACGGCGCGGCGC 582
BSNT_01275___ 583 TATGCCGAGTATCTTGTGTCAAAGGAAGAAGCAAGAGCCGAGCTTGAATA 632
||.|||||||.|||.||.||..||||||||||....||.||..|.||.||
RBAM_007790__ 583 TACGCCGAGTTTCTCGTTTCTCAGGAAGAAGCGCTCGCTGAATTAGAGTA 632
BSNT_01275___ 633 CGGGATTATCGGCAGGCCGGAGAGAAAATATTATTTGGCGGCGGATTAG 681
|||.|||||||||||||||||..|.|||||||||||.||....||.||.
RBAM_007790__ 633 CGGCATTATCGGCAGGCCGGAACGGAAATATTATTTAGCACATGAATAA 681
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