Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01272 and RBAM_007730

See Amino acid alignment / Visit BSNT_01272 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:57
# Commandline: needle
#    -asequence dna-align/BSNT_01272___yflS.1.9828.seq
#    -bsequence dna-align/RBAM_007730___yflS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01272___yflS-RBAM_007730___yflS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01272___yflS-RBAM_007730___yflS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01272___yflS
# 2: RBAM_007730___yflS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1438
# Identity:    1207/1438 (83.9%)
# Similarity:  1207/1438 (83.9%)
# Gaps:           2/1438 ( 0.1%)
# Score: 5099.0
# 
#
#=======================================

BSNT_01272___      1 ATGGCTTCAGAAAAAGACGCAGGAAAACAGTCA-GCAGTAAAGCTTGTTC     49
                     |||||||||||||||||||||..||||||| || ||||||||..|..|||
RBAM_007730__      1 ATGGCTTCAGAAAAAGACGCAAAAAAACAG-CAGGCAGTAAAAATCATTC     49

BSNT_01272___     50 CATTGCTTATTACTGTCGCTGTGGGACTAATCATCTGGTTTATTCCCGCT     99
                     |.||||||||||||||.|||||||||.|||||||.||||||||||||||.
RBAM_007730__     50 CTTTGCTTATTACTGTTGCTGTGGGATTAATCATTTGGTTTATTCCCGCG     99

BSNT_01272___    100 CCGTCCGGACTTGAACCTAAAGCTTGGCATTTGTTTGCGATTTTTGTCGC    149
                     |||||||||||||||||||||||.|||||||||||.||.|||||||||||
RBAM_007730__    100 CCGTCCGGACTTGAACCTAAAGCATGGCATTTGTTCGCTATTTTTGTCGC    149

BSNT_01272___    150 AACAATTATCGGCTTTATCTCCAAGCCCTTGCCAATGGGTGCAATTGCAA    199
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_007730__    150 AACAATTATCGGCTTTATCTCCAAGCCCTTGCCAATGGGCGCAATTGCAA    199

BSNT_01272___    200 TTTTTGCATTGGCGGTTACTGCACTAACTGGAACACTATCAATTGAGGAT    249
                     |||||||||||||.||.||.||..||||.|||||.|||||.|||||..||
RBAM_007730__    200 TTTTTGCATTGGCAGTCACCGCGTTAACGGGAACGCTATCTATTGAAAAT    249

BSNT_01272___    250 ACATTAAGCGGATTCGGGAATAAGACCATTTGGCTTATCGTTATCGCATT    299
                     ||.|||||||||||.||.||.|||||.||.|||||.||.||.|||||.||
RBAM_007730__    250 ACGTTAAGCGGATTTGGAAACAAGACAATCTGGCTGATTGTCATCGCCTT    299

BSNT_01272___    300 CTTTATTTCCCGGGGATTTATCAAAACCGGGCTCGGTGCTAGAATTTCGT    349
                     .||||||||||||||.||.|||||||||||||||||.||.||.|||||.|
RBAM_007730__    300 TTTTATTTCCCGGGGTTTCATCAAAACCGGGCTCGGCGCCAGGATTTCTT    349

BSNT_01272___    350 ATGTATTCGTTCAGAAATTCGGGAAAAAAACCCTTGGACTTTCTTATTCA    399
                     |.||||||||.||....||||||||.|||||.||.||.||||||||||||
RBAM_007730__    350 ACGTATTCGTACAACGGTTCGGGAAGAAAACACTCGGCCTTTCTTATTCA    399

BSNT_01272___    400 CTGCTATTCAGTGATTTAATACTTTCACCTGCTATTCCAAGTAATACGGC    449
                     |||||.||||||||||||||..|.||||||||.|||||.||.||.|||||
RBAM_007730__    400 CTGCTTTTCAGTGATTTAATTTTATCACCTGCCATTCCGAGCAACACGGC    449

BSNT_01272___    450 GCGTGCAGGAGGCATTATATTTCCTATTATCAGATCATTATCCGAAACAT    499
                     .||.||.||.||||||||.|||||||||||||||||||||||||||||.|
RBAM_007730__    450 ACGGGCGGGCGGCATTATTTTTCCTATTATCAGATCATTATCCGAAACTT    499

BSNT_01272___    500 TCGGATCAAGCCCGGCAAATGGAACAGAGAGGAAAATCGGTGCATTTTTA    549
                     |||||||||..||||||.|.|||||||||.||||||||||.||.||.|||
RBAM_007730__    500 TCGGATCAACGCCGGCAGACGGAACAGAGCGGAAAATCGGCGCTTTCTTA    549

BSNT_01272___    550 TTAAAAACCGGTTTTCAGGGGAATCTGATCACATCTGCTATGTTCCTGAC    599
                     |||||||||||||||||.||.||..||||.||.|||||.|||||..||||
RBAM_007730__    550 TTAAAAACCGGTTTTCAAGGAAACTTGATTACGTCTGCGATGTTTTTGAC    599

BSNT_01272___    600 AGCGATGGCGGCGAACCCGCTGATTGCCAAGCTGGCCCATGATGTCGCAG    649
                     .||.||||||||||||||||||||.||||||||||||||.||||||||||
RBAM_007730__    600 GGCAATGGCGGCGAACCCGCTGATCGCCAAGCTGGCCCACGATGTCGCAG    649

BSNT_01272___    650 GGGTGGACTTAACATGGACAAGCTGGGCAATTGCCGCGATTGTGCCGGGA    699
                     ||||||||.|.||||||||||||||||||||.||.||.|||||.||||||
RBAM_007730__    650 GGGTGGACATCACATGGACAAGCTGGGCAATCGCGGCCATTGTACCGGGA    699

BSNT_01272___    700 CTTGTAAGCTTAATCATCACGCCGCTTGTGATTTACAAGCTGTATCCGCC    749
                     .|.|..|||||||||||.||||||||.||.|||||.||||||||||||||
RBAM_007730__    700 TTGGCGAGCTTAATCATTACGCCGCTCGTCATTTATAAGCTGTATCCGCC    749

BSNT_01272___    750 GGAAATCAAAGAAACACCGGATGCGGCGAAAATCGCAACAGAAAAACTGA    799
                     ||||||.||||||||||||||||||||.|||||||||||.||||||.|||
RBAM_007730__    750 GGAAATTAAAGAAACACCGGATGCGGCTAAAATCGCAACGGAAAAATTGA    799

BSNT_01272___    800 AAGAAATGGGACCGTTCAAAAAATCAGAGCTTTCCATGGTTATCGTGTTT    849
                     ||||||||||.|||||.||||||||.||.||.||||||||.|||||.|||
RBAM_007730__    800 AAGAAATGGGTCCGTTTAAAAAATCCGAACTCTCCATGGTCATCGTCTTT    849

BSNT_01272___    850 CTTTTGGTGCTTGTGCTGTGGATTTTTGGCGGCAGCTTCAACATCGACGC    899
                     .|.||||||||||.||||||||||||.||.||.|||||.||.||.|||||
RBAM_007730__    850 TTATTGGTGCTTGCGCTGTGGATTTTCGGAGGAAGCTTAAATATTGACGC    899

BSNT_01272___    900 AACCACAACCGCATTGATCGGTTTGGCCGTTCTATTATTATCACAAGTTC    949
                     |||.||.||.||..|||||||.||..|||||.|..|.||.|||||.||..
RBAM_007730__    900 AACGACGACGGCCCTGATCGGATTATCCGTTTTGCTTTTGTCACAGGTAT    949

BSNT_01272___    950 TGACTTGGGATGATATCAAGAAAGAACAGGGCGCTTGGGATACGCTCACT    999
                     |.||.|||||.||.|||||.||.|||||.||.||.|||||||||||.|||
RBAM_007730__    950 TAACATGGGAGGACATCAAAAAGGAACAAGGTGCATGGGATACGCTGACT    999

BSNT_01272___   1000 TGGTTTGCGGCGCTTGTCATGCTCGCCAACTTCTTGAATGAATTAGGCAT   1049
                     |||||.|||||||||||.|||||.||.||.|||.|||||||..|.|||||
RBAM_007730__   1000 TGGTTCGCGGCGCTTGTGATGCTGGCGAATTTCCTGAATGAGCTCGGCAT   1049

BSNT_01272___   1050 GGTATCTTGGTTCAGTAATGCCATGAAATCATCCGTATCAGGGTTCTCTT   1099
                     |||.|||||||||||.|||...||||||||.||.||.||.||.||.||.|
RBAM_007730__   1050 GGTGTCTTGGTTCAGCAATATGATGAAATCTTCTGTTTCCGGTTTTTCAT   1099

BSNT_01272___   1100 GGATTGTGGCATTTATCATTTTAATTGTTGTGTATTATTACTCTCACTAT   1149
                     ||||||||||||||||.|||.|.|||||.||||||||||||.|.||.||.
RBAM_007730__   1100 GGATTGTGGCATTTATGATTCTGATTGTCGTGTATTATTACACGCATTAC   1149

BSNT_01272___   1150 TTCTTTGCAAGTGCGACAGCCCACATCAGTGCGATGTATTCAGCATTTTT   1199
                     ||||||||.||.||.||.||.||.|||||.||.||||||.|.||||||.|
RBAM_007730__   1150 TTCTTTGCGAGCGCAACCGCGCATATCAGCGCCATGTATGCGGCATTTCT   1199

BSNT_01272___   1200 GGCTGTCGTCGTGGCAGCGGGCGCACCGCCGCTTTTAGCAGCGCTGAGCC   1249
                     .||.|||.|||||||.||.|||||.||||||||.||.||.|||||.||||
RBAM_007730__   1200 CGCCGTCATCGTGGCTGCAGGCGCTCCGCCGCTGTTGGCGGCGCTCAGCC   1249

BSNT_01272___   1250 TCGCGTTCATCAGCAACCTGTTCGGGTCAACGACTCACTACGGTTCTGGA   1299
                     |.|||||..||||||||||.|||||.||.|||||.||.|||||.||.|||
RBAM_007730__   1250 TGGCGTTTTTCAGCAACCTTTTCGGTTCGACGACGCATTACGGCTCAGGA   1299

BSNT_01272___   1300 GCGGCTCCGGTCTTCTTCGGAGCAGGCTACATCCCACAAGGCAAATGGTG   1349
                     ||||||||||||||.||||||||.||.||.||..|.|||.||||||||||
RBAM_007730__   1300 GCGGCTCCGGTCTTTTTCGGAGCGGGTTATATATCGCAAAGCAAATGGTG   1349

BSNT_01272___   1350 GTCCATCGGATTTATCCTGTCGATTGTTCATATCATCGTATGGCTTGTGA   1399
                     |||||||||.|||||||||||.||.||.|||||..|...|||||||||||
RBAM_007730__   1350 GTCCATCGGCTTTATCCTGTCAATCGTCCATATTGTGACATGGCTTGTGA   1399

BSNT_01272___   1400 TCGGCGGATTATGGTGGAAAGTACTAGGAATATGGTAG   1437
                     |||||||||||||||||||||||.||||..|.|||||.
RBAM_007730__   1400 TCGGCGGATTATGGTGGAAAGTATTAGGTTTGTGGTAA   1437


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