Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01272 and RBAM_007730
See
Amino acid alignment /
Visit
BSNT_01272 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:57
# Commandline: needle
# -asequence dna-align/BSNT_01272___yflS.1.9828.seq
# -bsequence dna-align/RBAM_007730___yflS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01272___yflS-RBAM_007730___yflS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01272___yflS-RBAM_007730___yflS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01272___yflS
# 2: RBAM_007730___yflS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1438
# Identity: 1207/1438 (83.9%)
# Similarity: 1207/1438 (83.9%)
# Gaps: 2/1438 ( 0.1%)
# Score: 5099.0
#
#
#=======================================
BSNT_01272___ 1 ATGGCTTCAGAAAAAGACGCAGGAAAACAGTCA-GCAGTAAAGCTTGTTC 49
|||||||||||||||||||||..||||||| || ||||||||..|..|||
RBAM_007730__ 1 ATGGCTTCAGAAAAAGACGCAAAAAAACAG-CAGGCAGTAAAAATCATTC 49
BSNT_01272___ 50 CATTGCTTATTACTGTCGCTGTGGGACTAATCATCTGGTTTATTCCCGCT 99
|.||||||||||||||.|||||||||.|||||||.||||||||||||||.
RBAM_007730__ 50 CTTTGCTTATTACTGTTGCTGTGGGATTAATCATTTGGTTTATTCCCGCG 99
BSNT_01272___ 100 CCGTCCGGACTTGAACCTAAAGCTTGGCATTTGTTTGCGATTTTTGTCGC 149
|||||||||||||||||||||||.|||||||||||.||.|||||||||||
RBAM_007730__ 100 CCGTCCGGACTTGAACCTAAAGCATGGCATTTGTTCGCTATTTTTGTCGC 149
BSNT_01272___ 150 AACAATTATCGGCTTTATCTCCAAGCCCTTGCCAATGGGTGCAATTGCAA 199
|||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_007730__ 150 AACAATTATCGGCTTTATCTCCAAGCCCTTGCCAATGGGCGCAATTGCAA 199
BSNT_01272___ 200 TTTTTGCATTGGCGGTTACTGCACTAACTGGAACACTATCAATTGAGGAT 249
|||||||||||||.||.||.||..||||.|||||.|||||.|||||..||
RBAM_007730__ 200 TTTTTGCATTGGCAGTCACCGCGTTAACGGGAACGCTATCTATTGAAAAT 249
BSNT_01272___ 250 ACATTAAGCGGATTCGGGAATAAGACCATTTGGCTTATCGTTATCGCATT 299
||.|||||||||||.||.||.|||||.||.|||||.||.||.|||||.||
RBAM_007730__ 250 ACGTTAAGCGGATTTGGAAACAAGACAATCTGGCTGATTGTCATCGCCTT 299
BSNT_01272___ 300 CTTTATTTCCCGGGGATTTATCAAAACCGGGCTCGGTGCTAGAATTTCGT 349
.||||||||||||||.||.|||||||||||||||||.||.||.|||||.|
RBAM_007730__ 300 TTTTATTTCCCGGGGTTTCATCAAAACCGGGCTCGGCGCCAGGATTTCTT 349
BSNT_01272___ 350 ATGTATTCGTTCAGAAATTCGGGAAAAAAACCCTTGGACTTTCTTATTCA 399
|.||||||||.||....||||||||.|||||.||.||.||||||||||||
RBAM_007730__ 350 ACGTATTCGTACAACGGTTCGGGAAGAAAACACTCGGCCTTTCTTATTCA 399
BSNT_01272___ 400 CTGCTATTCAGTGATTTAATACTTTCACCTGCTATTCCAAGTAATACGGC 449
|||||.||||||||||||||..|.||||||||.|||||.||.||.|||||
RBAM_007730__ 400 CTGCTTTTCAGTGATTTAATTTTATCACCTGCCATTCCGAGCAACACGGC 449
BSNT_01272___ 450 GCGTGCAGGAGGCATTATATTTCCTATTATCAGATCATTATCCGAAACAT 499
.||.||.||.||||||||.|||||||||||||||||||||||||||||.|
RBAM_007730__ 450 ACGGGCGGGCGGCATTATTTTTCCTATTATCAGATCATTATCCGAAACTT 499
BSNT_01272___ 500 TCGGATCAAGCCCGGCAAATGGAACAGAGAGGAAAATCGGTGCATTTTTA 549
|||||||||..||||||.|.|||||||||.||||||||||.||.||.|||
RBAM_007730__ 500 TCGGATCAACGCCGGCAGACGGAACAGAGCGGAAAATCGGCGCTTTCTTA 549
BSNT_01272___ 550 TTAAAAACCGGTTTTCAGGGGAATCTGATCACATCTGCTATGTTCCTGAC 599
|||||||||||||||||.||.||..||||.||.|||||.|||||..||||
RBAM_007730__ 550 TTAAAAACCGGTTTTCAAGGAAACTTGATTACGTCTGCGATGTTTTTGAC 599
BSNT_01272___ 600 AGCGATGGCGGCGAACCCGCTGATTGCCAAGCTGGCCCATGATGTCGCAG 649
.||.||||||||||||||||||||.||||||||||||||.||||||||||
RBAM_007730__ 600 GGCAATGGCGGCGAACCCGCTGATCGCCAAGCTGGCCCACGATGTCGCAG 649
BSNT_01272___ 650 GGGTGGACTTAACATGGACAAGCTGGGCAATTGCCGCGATTGTGCCGGGA 699
||||||||.|.||||||||||||||||||||.||.||.|||||.||||||
RBAM_007730__ 650 GGGTGGACATCACATGGACAAGCTGGGCAATCGCGGCCATTGTACCGGGA 699
BSNT_01272___ 700 CTTGTAAGCTTAATCATCACGCCGCTTGTGATTTACAAGCTGTATCCGCC 749
.|.|..|||||||||||.||||||||.||.|||||.||||||||||||||
RBAM_007730__ 700 TTGGCGAGCTTAATCATTACGCCGCTCGTCATTTATAAGCTGTATCCGCC 749
BSNT_01272___ 750 GGAAATCAAAGAAACACCGGATGCGGCGAAAATCGCAACAGAAAAACTGA 799
||||||.||||||||||||||||||||.|||||||||||.||||||.|||
RBAM_007730__ 750 GGAAATTAAAGAAACACCGGATGCGGCTAAAATCGCAACGGAAAAATTGA 799
BSNT_01272___ 800 AAGAAATGGGACCGTTCAAAAAATCAGAGCTTTCCATGGTTATCGTGTTT 849
||||||||||.|||||.||||||||.||.||.||||||||.|||||.|||
RBAM_007730__ 800 AAGAAATGGGTCCGTTTAAAAAATCCGAACTCTCCATGGTCATCGTCTTT 849
BSNT_01272___ 850 CTTTTGGTGCTTGTGCTGTGGATTTTTGGCGGCAGCTTCAACATCGACGC 899
.|.||||||||||.||||||||||||.||.||.|||||.||.||.|||||
RBAM_007730__ 850 TTATTGGTGCTTGCGCTGTGGATTTTCGGAGGAAGCTTAAATATTGACGC 899
BSNT_01272___ 900 AACCACAACCGCATTGATCGGTTTGGCCGTTCTATTATTATCACAAGTTC 949
|||.||.||.||..|||||||.||..|||||.|..|.||.|||||.||..
RBAM_007730__ 900 AACGACGACGGCCCTGATCGGATTATCCGTTTTGCTTTTGTCACAGGTAT 949
BSNT_01272___ 950 TGACTTGGGATGATATCAAGAAAGAACAGGGCGCTTGGGATACGCTCACT 999
|.||.|||||.||.|||||.||.|||||.||.||.|||||||||||.|||
RBAM_007730__ 950 TAACATGGGAGGACATCAAAAAGGAACAAGGTGCATGGGATACGCTGACT 999
BSNT_01272___ 1000 TGGTTTGCGGCGCTTGTCATGCTCGCCAACTTCTTGAATGAATTAGGCAT 1049
|||||.|||||||||||.|||||.||.||.|||.|||||||..|.|||||
RBAM_007730__ 1000 TGGTTCGCGGCGCTTGTGATGCTGGCGAATTTCCTGAATGAGCTCGGCAT 1049
BSNT_01272___ 1050 GGTATCTTGGTTCAGTAATGCCATGAAATCATCCGTATCAGGGTTCTCTT 1099
|||.|||||||||||.|||...||||||||.||.||.||.||.||.||.|
RBAM_007730__ 1050 GGTGTCTTGGTTCAGCAATATGATGAAATCTTCTGTTTCCGGTTTTTCAT 1099
BSNT_01272___ 1100 GGATTGTGGCATTTATCATTTTAATTGTTGTGTATTATTACTCTCACTAT 1149
||||||||||||||||.|||.|.|||||.||||||||||||.|.||.||.
RBAM_007730__ 1100 GGATTGTGGCATTTATGATTCTGATTGTCGTGTATTATTACACGCATTAC 1149
BSNT_01272___ 1150 TTCTTTGCAAGTGCGACAGCCCACATCAGTGCGATGTATTCAGCATTTTT 1199
||||||||.||.||.||.||.||.|||||.||.||||||.|.||||||.|
RBAM_007730__ 1150 TTCTTTGCGAGCGCAACCGCGCATATCAGCGCCATGTATGCGGCATTTCT 1199
BSNT_01272___ 1200 GGCTGTCGTCGTGGCAGCGGGCGCACCGCCGCTTTTAGCAGCGCTGAGCC 1249
.||.|||.|||||||.||.|||||.||||||||.||.||.|||||.||||
RBAM_007730__ 1200 CGCCGTCATCGTGGCTGCAGGCGCTCCGCCGCTGTTGGCGGCGCTCAGCC 1249
BSNT_01272___ 1250 TCGCGTTCATCAGCAACCTGTTCGGGTCAACGACTCACTACGGTTCTGGA 1299
|.|||||..||||||||||.|||||.||.|||||.||.|||||.||.|||
RBAM_007730__ 1250 TGGCGTTTTTCAGCAACCTTTTCGGTTCGACGACGCATTACGGCTCAGGA 1299
BSNT_01272___ 1300 GCGGCTCCGGTCTTCTTCGGAGCAGGCTACATCCCACAAGGCAAATGGTG 1349
||||||||||||||.||||||||.||.||.||..|.|||.||||||||||
RBAM_007730__ 1300 GCGGCTCCGGTCTTTTTCGGAGCGGGTTATATATCGCAAAGCAAATGGTG 1349
BSNT_01272___ 1350 GTCCATCGGATTTATCCTGTCGATTGTTCATATCATCGTATGGCTTGTGA 1399
|||||||||.|||||||||||.||.||.|||||..|...|||||||||||
RBAM_007730__ 1350 GTCCATCGGCTTTATCCTGTCAATCGTCCATATTGTGACATGGCTTGTGA 1399
BSNT_01272___ 1400 TCGGCGGATTATGGTGGAAAGTACTAGGAATATGGTAG 1437
|||||||||||||||||||||||.||||..|.|||||.
RBAM_007730__ 1400 TCGGCGGATTATGGTGGAAAGTATTAGGTTTGTGGTAA 1437
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.