Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01260 and RBAM_007650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_01260___yfmO.1.9828.seq
# -bsequence dna-align/RBAM_007650___yfmO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01260___yfmO-RBAM_007650___yfmO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01260___yfmO-RBAM_007650___yfmO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01260___yfmO
# 2: RBAM_007650___yfmO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1191
# Identity: 1062/1191 (89.2%)
# Similarity: 1062/1191 (89.2%)
# Gaps: 6/1191 ( 0.5%)
# Score: 4805.5
#
#
#=======================================
BSNT_01260___ 1 ATGGATAAGACAACACAAGTGAATCAGAAAACGGGTTTGCTCAGCCAGCC 50
|||||||...||.||||| ||||||||.||.||..||||||||||
RBAM_007650__ 1 ATGGATACATCATCACAA------CAGAAAACAGGCTTATTCAGCCAGCC 44
BSNT_01260___ 51 AAAAGCGGTATGGGCTGTCGCGTTTGCCTGTGTGATTTCCTTTATGGGAA 100
.|||||.||.|||||.||.||||||||||||||.||||||||||||||||
RBAM_007650__ 45 GAAAGCCGTTTGGGCGGTTGCGTTTGCCTGTGTTATTTCCTTTATGGGAA 94
BSNT_01260___ 101 TCGGGCTGGTCGATCCAATTCTTCCGGCCATTGCCGCACAACTACATGCT 150
||||.||.||||||||.|||||||||||.||.|||||||||.||||||||
RBAM_007650__ 95 TCGGTCTTGTCGATCCGATTCTTCCGGCGATCGCCGCACAATTACATGCT 144
BSNT_01260___ 151 TCACCTAGTGAAGTATCACTCTTGTTTACAAGTTATTTGCTTGTAACCGG 200
|||||||||||||||||.||.||.|||||||||||||||||.||.|||||
RBAM_007650__ 145 TCACCTAGTGAAGTATCTCTGTTATTTACAAGTTATTTGCTCGTTACCGG 194
BSNT_01260___ 201 ATTTATGATGTTTTTCTCAGGAGCCATTTCCAGCCGCATCGGCGCGAAAT 250
.|||||||||||||||||.||.||.|||||||||||.||||||||.||||
RBAM_007650__ 195 TTTTATGATGTTTTTCTCCGGCGCGATTTCCAGCCGGATCGGCGCAAAAT 244
BSNT_01260___ 251 GGACATTAATTCTCGGACTTATTTTTATTATTGTGTTTGCGGGGCTTGGC 300
||||..|..|||||||||||||||||||.||.||||||||.|..||.|||
RBAM_007650__ 245 GGACGCTGCTTCTCGGACTTATTTTTATCATCGTGTTTGCCGCCCTCGGC 294
BSNT_01260___ 301 GGCAGCTCAAGCTCAATCGCTCAGTTAGTCGGCTATCGCGGCGGCTGGGG 350
||.||||||||.||||||||||||.|.|||||||||||||||||||||||
RBAM_007650__ 295 GGAAGCTCAAGTTCAATCGCTCAGCTTGTCGGCTATCGCGGCGGCTGGGG 344
BSNT_01260___ 351 ATTAGGGAATGCTTTGTTTATTTCAACAGCGCTTGCGGTCATCGTTGGTG 400
..|.|||||||||.|.|||||||||||.||||||||.|||||.||.||.|
RBAM_007650__ 345 GCTTGGGAATGCTCTCTTTATTTCAACCGCGCTTGCCGTCATTGTCGGGG 394
BSNT_01260___ 401 TATCAGTCGGAGGAAGCGCCCAAGCGATTATTTTGTATGAGGCTGCGCTC 450
||||.|||||.||.||||||.||||.||||||.|||||||||||||.|||
RBAM_007650__ 395 TATCTGTCGGCGGCAGCGCCAAAGCCATTATTCTGTATGAGGCTGCACTC 444
BSNT_01260___ 451 GGTCTCGGGATTTCCGTCGGGCCGCTTGCAGGCGGAGAGCTTGGAAGCAT 500
||..|.|||||||||||||||||||||||.|||||.||||||||.|||||
RBAM_007650__ 445 GGCTTGGGGATTTCCGTCGGGCCGCTTGCCGGCGGTGAGCTTGGCAGCAT 494
BSNT_01260___ 501 TTCATGGCGCGCACCGTTTTTCGGAGTATCTGTCCTGATGTTTATTACGT 550
||||||||||||.|||||.|||||||||||||||||.|||||.||..||.
RBAM_007650__ 495 TTCATGGCGCGCTCCGTTCTTCGGAGTATCTGTCCTCATGTTCATAGCGC 544
BSNT_01260___ 551 TAATCGCGATTTCTTTCATGCTTCCGAAATTGCCGAAACCGGCGAAACGC 600
|...|||||||||..|||||||.|||||..||||||||||||||||||||
RBAM_007650__ 545 TTTGCGCGATTTCACTCATGCTGCCGAAGCTGCCGAAACCGGCGAAACGC 594
BSNT_01260___ 601 GTCGGTGTGTTTGATGCGATGAAGGCGCTAAAATATAAAGGCCTTTTAAC 650
|||||||||||||||||||||||||||||.|||||||||||||||||.||
RBAM_007650__ 595 GTCGGTGTGTTTGATGCGATGAAGGCGCTCAAATATAAAGGCCTTTTGAC 644
BSNT_01260___ 651 AATGGCGGTATCGGCATTCTTATACAACTTTGGATTTTTTATTTTGCTTG 700
||||||.|||||.|||||||||||||||||||||||||||||||||||||
RBAM_007650__ 645 AATGGCAGTATCTGCATTCTTATACAACTTTGGATTTTTTATTTTGCTTG 694
BSNT_01260___ 701 CTTATTCTCCGTTCGTTCTGGATTTAGATGAACACGGTCTTGGATATGTC 750
||||||||||||||||.||||||||||||||||||||.||||||||||||
RBAM_007650__ 695 CTTATTCTCCGTTCGTGCTGGATTTAGATGAACACGGCCTTGGATATGTC 744
BSNT_01260___ 751 TTCTTCGGCTGGGGCCTTCTGCTGGCGATTACGTCAGTCTTTACGGCGCC 800
||||||||||||||..|..|||||||.|||||||||||||||||||||||
RBAM_007650__ 745 TTCTTCGGCTGGGGTTTATTGCTGGCAATTACGTCAGTCTTTACGGCGCC 794
BSNT_01260___ 801 GCTCGTGCACAAAGCGCTGGGCACAGTGCGTTCGCTCGTCGTTCTCTTTA 850
|||||||||||||||||||||.||||||.|||||||||||||||||||||
RBAM_007650__ 795 GCTCGTGCACAAAGCGCTGGGAACAGTGGGTTCGCTCGTCGTTCTCTTTA 844
BSNT_01260___ 851 TCGCCTTTGCGGCTATTCTCGTTATTATGGGGATCTGGACAGACCATCAG 900
||||||||||||..||||||.|..|.||||||||.|||||.|||||||||
RBAM_007650__ 845 TCGCCTTTGCGGTCATTCTCATCGTCATGGGGATATGGACTGACCATCAG 894
BSNT_01260___ 901 ACTTTGATTATTACATGTATCGTTGTCGCTGGTGCTGTTCTCGGTATGGT 950
||.|||||.|||||.||||||||||||||.||||||||||||||||||||
RBAM_007650__ 895 ACGTTGATCATTACGTGTATCGTTGTCGCCGGTGCTGTTCTCGGTATGGT 944
BSNT_01260___ 951 GAATACGATCATGACAACCGCTGTGATGGGTTCTGCGCCGGTTGAACGTT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_007650__ 945 GAATACGATCATGACAACCGCTGTGATGGGTTCTGCGCCGGTTGAACGTT 994
BSNT_01260___ 1001 CAATCGCGTCTTCAGCCTACAGCTCAGTCCGCTTCATCGGCGGCGCGCTC 1050
|||||||||||||||||||||||||||||||.||.||||||||.||||||
RBAM_007650__ 995 CAATCGCGTCTTCAGCCTACAGCTCAGTCCGTTTTATCGGCGGTGCGCTC 1044
BSNT_01260___ 1051 GCTCCGTGGATTGCAGGAATGCTGTCAGAACACTTTACTGCAAGCACACC 1100
||||||||||||||.||||||||||||||||||||.||.||||||||.||
RBAM_007650__ 1045 GCTCCGTGGATTGCGGGAATGCTGTCAGAACACTTCACCGCAAGCACTCC 1094
BSNT_01260___ 1101 ATATACAGTAGGCGGAATCGTCGTTTTTGTCGGCATGCTTGTCCTTCTCA 1150
|||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_007650__ 1095 ATATACAGTAGGCGGGATCGTCGTTTTTGTCGGCATGCTTGTCCTTCTCA 1144
BSNT_01260___ 1151 TGGGACGTAAACATCTTGCTGGAATTAAGGCGGGGCATTAA 1191
|||||||.||||||||.||.|||||.||.||.||.||||||
RBAM_007650__ 1145 TGGGACGCAAACATCTCGCCGGAATAAAAGCCGGACATTAA 1185
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