Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01251 and RBAM_007580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence dna-align/BSNT_01251___yfnA.1.9828.seq
# -bsequence dna-align/RBAM_007580___yfnA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01251___yfnA-RBAM_007580___yfnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01251___yfnA-RBAM_007580___yfnA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01251___yfnA
# 2: RBAM_007580___yfnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1403
# Identity: 1068/1403 (76.1%)
# Similarity: 1068/1403 (76.1%)
# Gaps: 34/1403 ( 2.4%)
# Score: 3967.0
#
#
#=======================================
BSNT_01251___ 1 ATGAGTTCATTATTTAGAAAAAAACCGCTTG-AAACATTGAGTGCGCAGA 49
|||..||.|.|||||.|.|||||.|||||.| ..|| ||.|..||.||||
RBAM_007580__ 1 ATGTCTTTACTATTTCGGAAAAAGCCGCTGGCCGAC-TTAAAGGCCCAGA 49
BSNT_01251___ 50 GCAAGTCA-AAAAGCCTTGCCCGTACGTTAAGCGCATTTGATTTAACCTT 98
|||| .|| |..|||||..||||..||||||||||.|||||.||....||
RBAM_007580__ 50 GCAA-ACAGACCAGCCTGTCCCGCTCGTTAAGCGCTTTTGACTTGGTTTT 98
BSNT_01251___ 99 GCTCGGTATCGGTTGTGTCATCGGTACAGGGATTTTTGTCATTACAGGAA 148
||||||.|||||.|||||..||||.||.|||||||||||.|||||.||.|
RBAM_007580__ 99 GCTCGGAATCGGCTGTGTTGTCGGCACGGGGATTTTTGTGATTACCGGGA 148
BSNT_01251___ 149 CAGTGGCAGCGACCGGTGCAGGTCCCGCCCTCATCATATCGTTTATTTTA 198
|.|||||.|||||.||.|||||.||.||..|.||..|.||||||.|..|.
RBAM_007580__ 149 CTGTGGCCGCGACAGGCGCAGGACCGGCTTTGATTCTGTCGTTTGTGCTC 198
BSNT_01251___ 199 GCGGGGCTCGCCTGTGCGCTGGCTGCTTTCTGTTATGCTGAGTTTTCGTC 248
|||||.||.|||||.|||||.||.||.||.||||||||.||.|||||.||
RBAM_007580__ 199 GCGGGCCTTGCCTGCGCGCTCGCCGCGTTTTGTTATGCGGAATTTTCTTC 248
BSNT_01251___ 249 TTCCATTCCGATTTCGGGAAGCGTGTACTCCTACTCATACGTGACACTTG 298
.||||||||||||||.||.|||||.||..|.||.|||||.||.||.||.|
RBAM_007580__ 249 ATCCATTCCGATTTCAGGCAGCGTATATACGTATTCATATGTCACTCTCG 298
BSNT_01251___ 299 GAGAGCTG-CTCGCCTTTTTGATCGGATGGGATCTCATGCTTGAATATGT 347
|.||| || |||||.|||||.|||||||||||..|.||||||||||||||
RBAM_007580__ 299 GGGAG-TGTCTCGCGTTTTTAATCGGATGGGACTTAATGCTTGAATATGT 347
BSNT_01251___ 348 CATTGCACTGTCGGCGGTTGCCACCGGCTGGTCTTCATACTTTCAATCAC 397
|||.||.||..|.||.||.||.|||||||||||.||.||.||.||.||.|
RBAM_007580__ 348 CATCGCGCTCGCCGCCGTCGCAACCGGCTGGTCATCCTATTTCCAGTCGC 397
BSNT_01251___ 398 TGCTTGCCGGCTTCAATCTTCATATTCCGGCTGCACTGACAGGAGCGCCG 447
|.|||||.||||||...||.|||.||||||..||.|||||.|..||.||.
RBAM_007580__ 398 TTCTTGCGGGCTTCGGGCTGCATCTTCCGGAGGCGCTGACCGCCGCACCC 447
BSNT_01251___ 448 GGAAGCACGGCGGGCGCCGTATTTAACCTTCCGGCTGCGGTGATCATTCT 497
||.||||...||||.||||..||.|||||.|||||.|...|.||.|||.|
RBAM_007580__ 448 GGCAGCAAAACGGGTGCCGGGTTCAACCTGCCGGCCGTTATCATTATTTT 497
BSNT_01251___ 498 CCTCATCACTGCGATTG--TCAGCAGAGGCGTCAAGGAAAGCACACGCTT 545
..||||.||.||||||| ||| ||.|||||.||.||||||||.|||||
RBAM_007580__ 498 GGTCATTACCGCGATTGTTTCA--AGGGGCGTGAAAGAAAGCACCCGCTT 545
BSNT_01251___ 546 TAACAACGTCATCGTACTGATGAAAATCGCGATCATATTATTGTTCATTA 595
||||||.|||||.|||.||||||||||.||||||||..|..||||.||.|
RBAM_007580__ 546 TAACAATGTCATTGTATTGATGAAAATTGCGATCATTCTGCTGTTTATCA 595
BSNT_01251___ 596 TTGTCGGCATCGGCTATGTGAAACCGGATAACTGGTCTCCTTTTATGCCT 645
|.|||||..|||||||.|||||||||||.||||||||.||.||||||||.
RBAM_007580__ 596 TCGTCGGTTTCGGCTACGTGAAACCGGAAAACTGGTCGCCGTTTATGCCG 645
BSNT_01251___ 646 TTCGGGATGAAAGGCGTCAT-ACTTAGCGCCGCCACTGTATTCTTCGCGT 694
|||||.|||||||||||||| || .||||||||.||.||.||||||||||
RBAM_007580__ 646 TTCGGAATGAAAGGCGTCATCAC-GAGCGCCGCGACCGTTTTCTTCGCGT 694
BSNT_01251___ 695 ACCTTGGGTTTGACGCGGTTTCTAACGCGTCAGAGGAAGTGAAAAATCCG 744
|.||.||.|||||.||.||.||.||||||||.||.|||||||||||.|||
RBAM_007580__ 695 ATCTCGGATTTGATGCCGTGTCAAACGCGTCGGAAGAAGTGAAAAACCCG 744
BSNT_01251___ 745 CAAAAAAACATGCCCGTCGGCATTATTTCAGCTCTAGCCGTCTGCACGGT 794
||.|||...|||||.|||||.||.||....||.||.|||.|||||||.||
RBAM_007580__ 745 CAGAAATCAATGCCGGTCGGAATCATCGGCGCGCTCGCCATCTGCACCGT 794
BSNT_01251___ 795 TCTGTACATCGCGGTATCGCTTGTGCTGACAGGCATGATGCCTTATGCCA 844
.||.|||||..||||||||||.||.|||||.||.|||.|..|.||..|||
RBAM_007580__ 795 CCTTTACATTACGGTATCGCTCGTCCTGACGGGAATGCTTTCGTACACCA 844
BSNT_01251___ 845 AATTGAATGTCGGAGATCCTGTATCCTTTGCTCTGAAATTCGTCGGACAG 894
|..||||||||||.|||||.|||||.||.||.||..||||.|||||.|||
RBAM_007580__ 845 AGCTGAATGTCGGGGATCCGGTATCTTTCGCGCTCCAATTTGTCGGCCAG 894
BSNT_01251___ 895 GACGCTGTTGCCGGAATTATTTCTGTCGGTGCGATTATCGGGATTACGAC 944
.||....|.||.||.||||||||.|||||.|||||||||||||||||.||
RBAM_007580__ 895 AACAAGATAGCAGGCATTATTTCCGTCGGCGCGATTATCGGGATTACAAC 944
BSNT_01251___ 945 GGTGATGCTCGCTTTGCTGTACGCTCAGGTTCGTTTGACATTTGCCATGA 994
|||.|||||||||.||||.|||||||||||.||..|.||||||||.||||
RBAM_007580__ 945 GGTCATGCTCGCTCTGCTTTACGCTCAGGTGCGCCTTACATTTGCGATGA 994
BSNT_01251___ 995 GCAGAGACGGCCTTCTGCCTGGATTGTTCGCAAAGGTTCATCCGTCATTT 1044
||||||||||||||.||||..|..||||..|.||||||||.|||...|||
RBAM_007580__ 995 GCAGAGACGGCCTTTTGCCCCGCATGTTTTCCAAGGTTCACCCGCGTTTT 1044
BSNT_01251___ 1045 AAAACCCCGTTCCGCAACACATGGCTGACAGGGATCGTTGCAGCGGGAAT 1094
|||||.|||||.|..|||||||||.||||.|||||||||||.||.||.||
RBAM_007580__ 1045 AAAACACCGTTTCAAAACACATGGGTGACGGGGATCGTTGCCGCCGGGAT 1094
BSNT_01251___ 1095 CGCCGGCTTTATTAACCTCGGAACGCTGGCCCATCTGGTGAACATGGGAA 1144
|||.||.||||||.|..|.|||||..||||.|||||.||.||||||||||
RBAM_007580__ 1095 CGCGGGTTTTATTGATTTGGGAACCTTGGCGCATCTCGTCAACATGGGAA 1144
BSNT_01251___ 1145 CACTT-GCCGCGTTTACGGTCATATCTATTGCTGTCATTGTGCTAAGAAA 1193
| ||| ||.||.|||||||||||..|.||.||.|||||.||..|||||||
RBAM_007580__ 1145 C-CTTGGCGGCCTTTACGGTCATTGCGATCGCCGTCATCGTTTTAAGAAA 1193
BSNT_01251___ 1194 GAAACATCCTGAAATCAAGGCGTCCTTCAGAGTGCCGTTCGTTCCGGTTG 1243
|||||||||.||.|||||..|.||||||.|.||.||.|||||.||..|||
RBAM_007580__ 1194 GAAACATCCGGAGATCAAATCTTCCTTCCGTGTTCCTTTCGTGCCTTTTG 1243
BSNT_01251___ 1244 TGCCGATTATCAGCGCAGGCATCTGCCTTTGGTTCATGTA---------C 1284
|||||||.|||||||||.||.|.|||| |||| |
RBAM_007580__ 1244 TGCCGATCATCAGCGCATGCTTATGCC---------TGTATCTCGCAAGC 1284
BSNT_01251___ 1285 AGCCTTCCCGGCGTCACATGGCTTTCATTTGTCATCTGGATCGCTGTC-G 1333
|||||.||.|||||.||||||||..|.|||||||||||||||||.|.| |
RBAM_007580__ 1285 AGCCTGCCGGGCGTGACATGGCTCGCCTTTGTCATCTGGATCGCCGCCGG 1334
BSNT_01251___ 1334 GAACGCTGGTTTACTTCCTATATTCGAGAAAACACAGCTTATTAAACAAA 1383
||.|| |.|||||..|..|.|||||||||||||||||.||.|||||.|||
RBAM_007580__ 1335 GATCG-TCGTTTATATGATGTATTCGAGAAAACACAGTTTGTTAAATAAA 1383
BSNT_01251___ 1384 TAA 1386
|||
RBAM_007580__ 1384 TAA 1386
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