Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01248 and RBAM_007570
See
Amino acid alignment /
Visit
BSNT_01248 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence dna-align/BSNT_01248___yfnC.1.9828.seq
# -bsequence dna-align/RBAM_007570___yfnC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01248___yfnC-RBAM_007570___yfnC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01248___yfnC-RBAM_007570___yfnC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01248___yfnC
# 2: RBAM_007570___yfnC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1270
# Identity: 935/1270 (73.6%)
# Similarity: 935/1270 (73.6%)
# Gaps: 80/1270 ( 6.3%)
# Score: 3483.5
#
#
#=======================================
BSNT_01248___ 1 TTGGCTATCGCCGCCCCGTTAAAAGAAAAAACAGTTCA----------AA 40
|||||.||.|||||||||.|.|||||||||.|.||.|| |.
RBAM_007570__ 1 TTGGCAATTGCCGCCCCGCTTAAAGAAAAACCTGTCCATCGTCCCGAGAC 50
BSNT_01248___ 41 AACCAGGCACCACGGTGTATCCGATTTTGATTATTATCGGAATTTGCCAT 90
||||| |||||.|.||||||.|.||||||||.|||||.|||
RBAM_007570__ 51 AACCA----------TGTATTCTATTTTGTTCATTATCGGGATTTGTCAT 90
BSNT_01248___ 91 ATGCTCAACGATTCGCTTCAGGCTGTGATTCCGGCCATGTTCCCTATTTT 140
.||||.||||||||.||.||.||.|||||||||||.|||||.||.||.||
RBAM_007570__ 91 CTGCTGAACGATTCACTGCAAGCGGTGATTCCGGCGATGTTTCCGATATT 140
BSNT_01248___ 141 GGAACGCTCCATGAGCCTGACGTTTACACAGCTCGGCATCATCGCTTTCA 190
||||||.|||||||..||.||.|||||.||||||||.||.|||||.||.|
RBAM_007570__ 141 GGAACGTTCCATGAATCTTACATTTACGCAGCTCGGAATTATCGCCTTTA 190
BSNT_01248___ 191 CATTAAACATGGTGTCATCCGTCATGCAGCCTGTTGTCGGCTGGTATACC 240
|..|.||.||||||||.|||||.||||||||.||..|||||||||||||.
RBAM_007570__ 191 CGCTGAATATGGTGTCTTCCGTGATGCAGCCCGTCATCGGCTGGTATACG 240
BSNT_01248___ 241 GATAAACGGCCGCGGCCGTATGCGCTGCCAGTCGGTTTGACCGCCAGCAT 290
||||||||.|||..|||||||||..||||..||||..|.|||||.|||||
RBAM_007570__ 241 GATAAACGCCCGATGCCGTATGCCTTGCCGCTCGGACTCACCGCAAGCAT 290
BSNT_01248___ 291 GCTTGGCATTTTAGGCCTTGCATTTGCCCCGTCATTCATAACGATCCTAT 340
|||.|||||||||||.||.||.||.||||||||.||..|.|||||..|||
RBAM_007570__ 291 GCTCGGCATTTTAGGTCTGGCGTTCGCCCCGTCTTTTCTGACGATTTTAT 340
BSNT_01248___ 341 GCTGTGTGTTTTTCATTGGATTAGGCTCGGCCATTTTCCACCCGGAGGGC 390
|||||||.|||||.||.||..|.|||||.|||.|.||.||.||.||.||.
RBAM_007570__ 341 GCTGTGTCTTTTTTATCGGCCTTGGCTCCGCCGTCTTTCATCCTGAAGGA 390
BSNT_01248___ 391 TCCCGTGTGGCGTATATGGCCGCCGGCACAAAACGCGGGCTCGCCCAGTC 440
||.|||||.||.||.||||||||||||..|||.||||||.|.||.||.||
RBAM_007570__ 391 TCGCGTGTCGCCTACATGGCCGCCGGCGAAAAGCGCGGGTTGGCGCAATC 440
BSNT_01248___ 441 GATTTATCAGGTGGGCGGAAACTCAGGCCAGGCGATGGCGCCGCTGATCA 490
||||||.||.||.||.||.||..|.|||||||||||||||||..||||.|
RBAM_007570__ 441 GATTTACCAAGTCGGAGGGAATACCGGCCAGGCGATGGCGCCCTTGATTA 490
BSNT_01248___ 491 CCGCGCTGATCCTTGTACCGCTCGGGCAATTCGGCGCTGTTTGGTTCACG 540
||||||||||.||.||.||||||||.|||||||||.||||.|||||.|||
RBAM_007570__ 491 CCGCGCTGATTCTCGTTCCGCTCGGTCAATTCGGCTCTGTCTGGTTTACG 540
BSNT_01248___ 541 CTTGTCGCCGCGCTTGCTGTTTTGTTTCTCATGTATATTGCGAAATGGTA 590
||.||||||||..|.||||||.||||||||||.|||||.||.||||||||
RBAM_007570__ 541 CTAGTCGCCGCAATCGCTGTTCTGTTTCTCATTTATATCGCCAAATGGTA 590
BSNT_01248___ 591 CGCCTCACGTCTCGGCAGCCTTGCCCAGAAATCA------GGCAAACAAA 634
|...|||.||||| |.||| .|| |..|
RBAM_007570__ 591 ---------TAAAGGCCGCCTT-------ATTCATTTGCGCGC---CGTA 621
BSNT_01248___ 635 AGAAAACGGCTGAAAACA-CGGCC------------------ATCACCAA 665
||.||| |||.|| ||||| ||.||.||
RBAM_007570__ 622 AGTAAA------AAATCACCGGCCTCCGCTGTGCAGACCGTGATTACAAA 665
BSNT_01248___ 666 ATCTGTTGTATCT-GCTCTTATTATTATTATATTTCTCATTTTTGCTCGT 714
|.|..||.| ||| ||.|||||.||.|||||.||..|.|||||.||.||.
RBAM_007570__ 666 ACCGATTAT-TCTCGCCCTTATCATGATTATCTTCTTAATTTTCGCGCGC 714
BSNT_01248___ 715 TCTTGGTATACGAGTGCGATCGGTAACTTTTACACGTTTTACGCGATGGA 764
||.||||||..|||.||||||||.||||||||.|||||.||.||||||.|
RBAM_007570__ 715 TCCTGGTATGTGAGCGCGATCGGCAACTTTTATACGTTCTATGCGATGAA 764
BSNT_01248___ 765 TACCTATCACGTAAGCATTCAGCAGGCACAAAGCTATATTTTTGTCTTCT 814
|.|||||||.||.|||||||||||||||||.|||||.||.||.|||||.|
RBAM_007570__ 765 TGCCTATCATGTCAGCATTCAGCAGGCACAGAGCTACATCTTCGTCTTTT 814
BSNT_01248___ 815 TGCTGTTCGGTGCAATCGGCACGTTTCTCGGCGGCCCGCTTGCAGACCGT 864
|..|.|||||.||..||||.||||||||||||||.|||||||||||||||
RBAM_007570__ 815 TATTTTTCGGAGCTGTCGGAACGTTTCTCGGCGGGCCGCTTGCAGACCGT 864
BSNT_01248___ 865 TTTGGAAAACGCTTCGTTATCCTCGGTTCGCTGTTATGC-TCGGCGCCGC 913
||.|||||.||...|||.|||.|||.||||.||.|| || |||||.||..
RBAM_007570__ 865 TTCGGAAAGCGGAACGTCATCATCGTTTCGATGATA-GCATCGGCTCCAT 913
BSNT_01248___ 914 TGGCGATTGTGCTGCCATTTGCCGGCCCGGTTCTCGCCTATGGCGTGCTC 963
||.|.|||.|.||.||.|||||.||.||.||..|||||||||||||.||.
RBAM_007570__ 914 TGACAATTTTCCTTCCGTTTGCGGGGCCTGTCATCGCCTATGGCGTACTG 963
BSNT_01248___ 964 GCATTGATTGGCTTGGTTCTGATGTCGAGCTTTTCTGTAACGGTCGTCTA 1013
||..||||.||..|.|||||||||||.|||||.||.||.|||||.|||||
RBAM_007570__ 964 GCGCTGATCGGTGTTGTTCTGATGTCCAGCTTCTCCGTGACGGTTGTCTA 1013
BSNT_01248___ 1014 CGCACAGGAGCTAGTTCCTGGAAAAATCGGCACAATGTCCGGTTTAACCG 1063
|||.||||||||.|||||.||.||||||||.||.|||||.||..|.||.|
RBAM_007570__ 1014 CGCGCAGGAGCTTGTTCCAGGCAAAATCGGAACGATGTCAGGGCTTACGG 1063
BSNT_01248___ 1064 TCGGGCTTGCCTTCGGGATGGGCGCGATCGGCGCTGTGGCGCTGGGCGCT 1113
|||||||.||||||||.||||||||||||||.||.||.|||||.||.|||
RBAM_007570__ 1064 TCGGGCTCGCCTTCGGAATGGGCGCGATCGGAGCCGTTGCGCTCGGAGCT 1113
BSNT_01248___ 1114 CTGATTGACGCAGCGGGACTGACCCCGACGATGATCGCCATTGCCTTTCT 1163
||.|||||..||||||||.||||.|||||.||||..|||.|.||||||||
RBAM_007570__ 1114 CTTATTGATTCAGCGGGATTGACGCCGACTATGACTGCCGTCGCCTTTCT 1163
BSNT_01248___ 1164 CCCTGTTCTCGGCATCCTTGCCTTCCTATTGCCAAGTGACCAGAAGCTGA 1213
.||.|||.|.||..|.||.|||||..|..||||.||.|||.|.|...|.|
RBAM_007570__ 1164 GCCCGTTTTAGGTCTGCTCGCCTTTGTCCTGCCGAGCGACAAAACATTAA 1213
BSNT_01248___ 1214 GAGAATGGCATAGCTGA--- 1230
.|||||||||| |.|
RBAM_007570__ 1214 AAGAATGGCAT---TCATAA 1230
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.