Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01244 and RBAM_007530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence dna-align/BSNT_01244___yfnG.1.9828.seq
# -bsequence dna-align/RBAM_007530___yfnG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01244___yfnG-RBAM_007530___yfnG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01244___yfnG-RBAM_007530___yfnG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01244___yfnG
# 2: RBAM_007530___yfnG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 977
# Identity: 793/977 (81.2%)
# Similarity: 793/977 (81.2%)
# Gaps: 16/977 ( 1.6%)
# Score: 3199.5
#
#
#=======================================
BSNT_01244___ 1 TTGAGTTTCTGGAAAAATAAAAACGTATTTGTCACGGGATGCACAGGTCT 50
|||||||||||||||||||||||.||.|||||.||||||||.||||||||
RBAM_007530__ 1 TTGAGTTTCTGGAAAAATAAAAATGTGTTTGTGACGGGATGTACAGGTCT 50
BSNT_01244___ 51 TTTAGGAAGCTATTTGGTGAAAGAGCTGATTGAACAGGGCGCAAACGTTA 100
|||||||||||..||||||||.||.|||||.||.|||||.||.||.||.|
RBAM_007530__ 51 TTTAGGAAGCTGCTTGGTGAAGGAACTGATCGATCAGGGGGCCAATGTGA 100
BSNT_01244___ 101 CGGGGCTTGTCAGGGATCA-TGTGCCTCAA-TCCAATCTTTATCAGGGAG 148
||||.||||||.|.|| || |||||| ||| ||.||.||.||||||||||
RBAM_007530__ 101 CGGGACTTGTCCGTGA-CACTGTGCC-CAAGTCGAACCTGTATCAGGGAG 148
BSNT_01244___ 149 AACATATCAAGAAAATGAACATCGTGCGGGGCTCTCTTGAGGACTTGGCT 198
||||..|.|||.|||||||.|||||||.||||.|.|||||.||..|||.|
RBAM_007530__ 149 AACAAGTGAAGCAAATGAATATCGTGCAGGGCGCGCTTGAAGATCTGGAT 198
BSNT_01244___ 199 GTGATTGAACGCGCGCTTGGCGAGTATGAGATCGACACTGTCTTTCATCT 248
||||||||.||.|||||.|||||.|||||.||.|||||.|||||||||.|
RBAM_007530__ 199 GTGATTGAGCGGGCGCTGGGCGAATATGAAATTGACACGGTCTTTCATTT 248
BSNT_01244___ 249 TGCTGCACAAGCGATTGTCGGCGTGGCAAACCGCAACCCGATTTCTACCT 298
.||.||.||.|||||.||||||||.|||||||||||.||||||||.||.|
RBAM_007530__ 249 AGCCGCTCAGGCGATCGTCGGCGTCGCAAACCGCAATCCGATTTCCACAT 298
BSNT_01244___ 299 TTGAAGCGAATATCCTCGGTACATGGAATATTCTCGAAGCCTGCCGCAAG 348
|||||||.|||||.|||||.||||||||.||.||.|||||.|||||||.|
RBAM_007530__ 299 TTGAAGCCAATATTCTCGGCACATGGAACATCCTTGAAGCGTGCCGCAGG 348
BSNT_01244___ 349 CATCCGTTAATTAAGCGGGTCATTGTCGCTTCAAGTGATAAAGCTTACGG 398
||||||.|.||.||||||||.||.|||||.||.|||||||||||.|||||
RBAM_007530__ 349 CATCCGCTCATCAAGCGGGTGATCGTCGCGTCCAGTGATAAAGCGTACGG 398
BSNT_01244___ 399 CGATCA--AGAAAACCTTCCATACGATGAAAACATGCCGCTGCAAGGCAA 446
|||.|| .||.| ||.||.|||||||||||||||||.||.||||||||
RBAM_007530__ 399 CGACCAGCCGACA--CTGCCGTACGATGAAAACATGCCTCTTCAAGGCAA 446
BSNT_01244___ 447 GCACCCGTACGACGTCTCAAAAAGCTGCGCAGATCTGATCAGCCACACCT 496
.||.||.||.|||||.|||||||||||.||.|||.|..|.||||||||.|
RBAM_007530__ 447 ACATCCTTATGACGTATCAAAAAGCTGTGCCGATTTATTAAGCCACACAT 496
BSNT_01244___ 497 ATTTTCACACGTACGGGCTTCCGGTCTGCATTACGCGCTGCGGAAACTTA 546
|||||.|.||||||||.|||||||||||.||||||||||||||.|||||.
RBAM_007530__ 497 ATTTTAATACGTACGGACTTCCGGTCTGTATTACGCGCTGCGGCAACTTG 546
BSNT_01244___ 547 TACGGCGGCGGAGATTTGAACTTCAACCGCATCATTCCTCAGACGATTCA 596
|||||||||||||||||||||||||||||.||.|||||.|||||||||||
RBAM_007530__ 547 TACGGCGGCGGAGATTTGAACTTCAACCGGATTATTCCGCAGACGATTCA 596
BSNT_01244___ 597 GCTTGTGCTGAACGGGGAAGCGCCGGAAATCCGAAGCGACGGTACCTTTG 646
|||.|||||||||||.|||||||||||||||||.||||||||.||.|||.
RBAM_007530__ 597 GCTCGTGCTGAACGGTGAAGCGCCGGAAATCCGCAGCGACGGCACATTTA 646
BSNT_01244___ 647 TACGGGACTACTTCTATATTGAAGACGCCGTTCAGGCTTATCTGCTTCTT 696
|.||.||.||.||.||.||.||.||.||.||..||||.||.||..|.||.
RBAM_007530__ 647 TCCGTGATTATTTTTACATCGAGGATGCGGTCGAGGCATACCTTTTGCTG 696
BSNT_01244___ 697 GCAGAAAAAATGGAAGAAAACAATCTTGCCGGAGAGGCCTTTAACTTCAG 746
||.|||||.|||||.||...|||||||||.|||||.||.||.||||||||
RBAM_007530__ 697 GCGGAAAAGATGGAGGAGCTCAATCTTGCGGGAGAAGCGTTCAACTTCAG 746
BSNT_01244___ 747 CAATGAGATCCAGCTGACCGTACTTGAACTGGTAGAGAAAATATTAAAGA 796
|||||||||.||||||||.||.||.||.||.|||||.|||||..|.|||.
RBAM_007530__ 747 CAATGAGATTCAGCTGACGGTGCTGGAGCTTGTAGAAAAAATTCTTAAGG 796
BSNT_01244___ 797 AAATGAACAGTAATCTGAAACCTAAGGTGCTGAATCAGGGAAGCAATGAA 846
..|||.|||||.|.||.||.||.||.|||||.||.|||||||||.|||||
RBAM_007530__ 797 CCATGGACAGTGACCTCAAGCCGAAAGTGCTCAACCAGGGAAGCCATGAA 846
BSNT_01244___ 847 ATCAAACATCAATATTTATCCGCGGAAAAAGCAAGAAAGCTGCTGAATTG 896
|||||.||.|||||||||||.||||||||.||.||.|||||.||||||||
RBAM_007530__ 847 ATCAAGCACCAATATTTATCGGCGGAAAAGGCGAGGAAGCTTCTGAATTG 896
BSNT_01244___ 897 GACACCGGCCTACACCATTGATGAGGGACTTGAAAAAACGATTGAGTGGT 946
|||.||.||..|.|||||||||||.|||.|.|||||||||||.||.||||
RBAM_007530__ 897 GACGCCCGCGCATACCATTGATGAAGGATTGGAAAAAACGATCGAATGGT 946
BSNT_01244___ 947 ATACGGAA----TTCTTCAAAAAGTAA 969
||| || ||.||| ||||||||
RBAM_007530__ 947 ATA---AAGCCTTTTTTC-AAAAGTAA 969
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