Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01231 and RBAM_007350
See
Amino acid alignment /
Visit
BSNT_01231 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence dna-align/BSNT_01231___yetJ.1.9828.seq
# -bsequence dna-align/RBAM_007350___yetJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01231___yetJ-RBAM_007350___yetJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01231___yetJ-RBAM_007350___yetJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01231___yetJ
# 2: RBAM_007350___yetJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 650
# Identity: 487/650 (74.9%)
# Similarity: 487/650 (74.9%)
# Gaps: 10/650 ( 1.5%)
# Score: 1761.0
#
#
#=======================================
BSNT_01231___ 1 ATGCAAGCTACGGTTCACGAGAGTAAGCAATCGATCATGCAACGCATTTT 50
||||||.||.|.|.|.|.|||||.||.|||||.||.|||||.||||||.|
RBAM_007350__ 1 ATGCAAACTGCTGCTTATGAGAGCAAACAATCTATTATGCAGCGCATTAT 50
BSNT_01231___ 51 GACAGTCTTTGTCTTCACTTTGCTGATCGCGACTGTCGGCCTTTTTATCG 100
.||.||.|||||.||.||..||.|..|.|||||..|||||||.|.||..|
RBAM_007350__ 51 AACGGTATTTGTGTTTACACTGTTAGTTGCGACAATCGGCCTGTATACGG 100
BSNT_01231___ 101 GCCAATTTGTTCCTGTC-GCTTTGATGCTGCCGCTTTCTATTCTT-GAAG 148
|.||.||..|||| |.| ||.||||||||||||||.||.| |||| ||.|
RBAM_007350__ 101 GTCAGTTCATTCC-GCCGGCATTGATGCTGCCGCTGTCGA-TCTTAGAGG 148
BSNT_01231___ 149 TGGTGATGATTATTCTGGCCTTCTGGATGCGCAGAAGAAAAGCGGTCGGG 198
|.||.|||||.||....||.||.|||.|||||.|||.||||||.|||||.
RBAM_007350__ 149 TCGTCATGATCATCGCCGCATTTTGGCTGCGCCGAAAAAAAGCCGTCGGA 198
BSNT_01231___ 199 TATGCGTTTGTATATACATTCGCGTTCGTTTCCGGCATTACCTTATTTCC 248
||||.||||||.|.|.|||||||.|||.|||||||.||.||..|.|||||
RBAM_007350__ 199 TATGTGTTTGTCTTTTCATTCGCTTTCATTTCCGGAATGACGCTGTTTCC 248
BSNT_01231___ 249 GATCGTCAGCCATTACGCTTCCATCGCCGGCGCCTATGTCGTGCTTGAAG 298
|||..||||||||||.||.|||...||.||.|||||||||||..|.||.|
RBAM_007350__ 249 GATTATCAGCCATTATGCGTCCGCAGCGGGGGCCTATGTCGTATTGGAGG 298
BSNT_01231___ 299 CCTTTGGTTCTACATTTGTCATTTTTGCCGTCTTAGGCACAATCGGCGCA 348
|.||.|||||..|.|||||.||||||||.||..|.|||||.||||||||.
RBAM_007350__ 299 CATTCGGTTCATCGTTTGTGATTTTTGCGGTGCTCGGCACGATCGGCGCT 348
BSNT_01231___ 349 AAAATGAAGAAGGATTTATCCTTCCTGTGGTCATTTCTGCTGGTTGCGGT 398
||.|.|||.|||||.||.||.||..|.|||||.||..||||.||.||.||
RBAM_007350__ 349 AAGACGAAAAAGGACTTGTCGTTTTTATGGTCCTTCTTGCTTGTCGCTGT 398
BSNT_01231___ 399 GCTCGC---CCTCGCAGTGGTAGGGATTTTCAACATTTTCAGCCCGTTAA 445
..|||| .||||||||| |||||.||.||.||||||||||||.|.|
RBAM_007350__ 399 CATCGCGCTTCTCGCAGTG---GGGATCTTTAATATTTTCAGCCCGCTGA 445
BSNT_01231___ 446 ACTCAGCGGCGATGATGGCGTATTCCGTGATCGGAACCATCGTCTTTTCC 495
|.||.||.||.|||||||||||||||||.|||||.||.||.||.|||||.
RBAM_007350__ 446 ATTCCGCCGCCATGATGGCGTATTCCGTCATCGGGACGATTGTGTTTTCA 495
BSNT_01231___ 496 CTTTACATTTTGTATGATTTGAACCAAATCAAGCACCGCCACATTACGGA 545
.|.|||||.||.||.|||.|||||||.|||||||||||..||||.||||.
RBAM_007350__ 496 ATGTACATCTTATACGATCTGAACCAGATCAAGCACCGGGACATCACGGC 545
BSNT_01231___ 546 AGACTTGATTCCGGTTATGGCGTTATCGCTGTACCTAGACTTTATCAACT 595
.|||.|||||||..|.|||||.||..||||.||..|.||||||||.|||.
RBAM_007350__ 546 TGACCTGATTCCTTTGATGGCATTGACGCTTTATATCGACTTTATTAACC 595
BSNT_01231___ 596 TGTTCATCAACCTGCTCCGCTTCTTCGGCATTTTGAGCAGTGATGATTAA 645
||||.|||||||||||.||.||.|||||.|||||.|.|||||||||||||
RBAM_007350__ 596 TGTTTATCAACCTGCTACGGTTTTTCGGAATTTTAAACAGTGATGATTAA 645
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.