Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01222 and RBAM_007290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence dna-align/BSNT_01222___yetF.1.9828.seq
# -bsequence dna-align/RBAM_007290___yetF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01222___yetF-RBAM_007290___yetF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01222___yetF-RBAM_007290___yetF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01222___yetF
# 2: RBAM_007290___yetF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 725
# Identity: 492/725 (67.9%)
# Similarity: 492/725 (67.9%)
# Gaps: 64/725 ( 8.8%)
# Score: 1605.5
#
#
#=======================================
BSNT_01222___ 1 ATGGGA-AATTATTTA-AGTG--TTGCG-GTAGAACTGGTCTGCGGTTTA 45
|||||| |.|||.||| |||| |||.| || |.||.||||||||.
RBAM_007290__ 1 ATGGGACATTTACTTACAGTGGCTTGGGAGT-----TAGTATGCGGTTTG 45
BSNT_01222___ 46 GGCATTTTATTTATCATCTTAAAGCTTCTCGGGAAAACCCAATTTTCTCA 95
||.|||||||||.|.||.|||||..|.||.||.|||||.|||||.||.||
RBAM_007290__ 46 GGTATTTTATTTGTGATTTTAAAATTGCTTGGAAAAACTCAATTCTCGCA 95
BSNT_01222___ 96 AATTACGCCGTTTGACTTTATCTCTGCTTTAATTTTAGGAGAATTGGTCG 145
|||||||||||||||.|||||.||.||..|.||..|.||.|||.||||||
RBAM_007290__ 96 AATTACGCCGTTTGATTTTATTTCCGCGCTCATCCTCGGCGAACTGGTCG 145
BSNT_01222___ 146 GAAATGCCGTTTACGATCATGAAA----TCAAAATCAAAGAAATTATTTT 191
|||||||.||.||.||| ||| |||..||....|||||.|||||
RBAM_007290__ 146 GAAATGCGGTGTATGAT----AAAGGCGTCAGGATTTTTGAAATCATTTT 191
BSNT_01222___ 192 TGCTTCGCTATTGTGGGGCGTGCTGATTTATATTATTGAATTTATCACGC 241
|||.||.||.||.|||||..|..|.||||||.|.||.|||.|.||.||||
RBAM_007290__ 192 TGCCTCTCTGTTATGGGGGATTTTAATTTATCTCATCGAACTGATTACGC 241
BSNT_01222___ 242 AAAAAATGAAATCATCGCGAAAGTTCTTGGAGGGCGAGCCGAATATCGTC 291
|.|||.|.|||...||..|||||.|.|||||.||||||||||.|||..||
RBAM_007290__ 242 AGAAAGTAAAAAGCTCCAGAAAGCTGTTGGAAGGCGAGCCGAGTATTATC 291
BSNT_01222___ 292 ATCCGCAAAGGGGAGCTTCAATATAAAGTATTGAAGAAAAATAAGATGGA 341
||.|..|||||..|.||..|||||.|.||..||||.||.||||||.||||
RBAM_007290__ 292 ATACATAAAGGAAAACTGAAATATGATGTGCTGAAAAAGAATAAGCTGGA 341
BSNT_01222___ 342 CATTAACCAGCTGCAAAGCCTTTTGAGGCAAGCGGGGAGCTTTTCGATTC 391
||||||.||..|||||||||||.|.||.||.|||....|||||||.||.|
RBAM_007290__ 342 CATTAATCAATTGCAAAGCCTTCTCAGACAGGCGAATTGCTTTTCCATAC 391
BSNT_01222___ 392 AAGAAGTAGAATATGCGATTTTGGAAACAAACGGGATGGTCAGTGTGCTT 441
|.||||..||.||.||||||||.||||||||||||||||||||.||.||.
RBAM_007290__ 392 AGGAAGCGGAGTACGCGATTTTAGAAACAAACGGGATGGTCAGCGTCCTG 441
BSNT_01222___ 442 CCAAAATCCGACTTTGACAAACCGACCAATAA---GGATTTGCAGATTCC 488
||.||||...|.|.||||| ||||.||.|| .||..||||.||...
RBAM_007290__ 442 CCGAAATTTCAATATGACA---CGACGAAAAACGGCGACATGCAAATAAA 488
BSNT_01222___ 489 TTCGAA----GTCTGTTTCCCTGCCGATCACTTTAATCATAGATGGAGAG 534
..|||| ||||.|| |||||.||||..|.||.||.||.||.||
RBAM_007290__ 489 GCCGAAGCAGGTCTCTT----TGCCGGTCACGCTGATTATTGACGGCGA- 533
BSNT_01222___ 535 ATTGTCCGG---GATAATCTGAAGGAAGCAGGTGTGGATGAACAGTGGCT 581
.||.|.| ||.||||||||.|||||.||..||||.|||.||..|||
RBAM_007290__ 534 --AGTGCTGTATGAAAATCTGAAAGAAGCCGGGCTGGAAGAAAAGCAGCT 581
BSNT_01222___ 582 GAAGCAAGAATTGAAAAAGAAGAACATTGATAAGACGGAGGACGTGTTAT 631
|||.||.||..||||||||..||||||..|.||.||.|||||||||.|.|
RBAM_007290__ 582 GAATCAGGAGCTGAAAAAGCTGAACATCAAAAAAACAGAGGACGTGCTGT 631
BSNT_01222___ 632 TTGCAGAATGGCATAAAA-----ATAAGCCGCTGT-----ATACCGTAAC 671
.|||.|||||| || ||||.||||||| .|.|||||..
RBAM_007290__ 632 ATGCGGAATGG-----AAGCCCGATAAACCGCTGTTTGTCCTGCCGTATG 676
BSNT_01222___ 672 ATACGAACAAAGCAGATCAACATGA 696
|...|||.|||..|
RBAM_007290__ 677 AGGAGAAAAAATAA----------- 690
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