Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01173 and RBAM_007260

See Amino acid alignment / Visit BSNT_01173 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence dna-align/BSNT_01173___cotJC.1.9828.seq
#    -bsequence dna-align/RBAM_007260___cotJC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01173___cotJC-RBAM_007260___cotJC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01173___cotJC-RBAM_007260___cotJC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01173___cotJC
# 2: RBAM_007260___cotJC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 571
# Identity:     480/571 (84.1%)
# Similarity:   480/571 (84.1%)
# Gaps:           2/571 ( 0.4%)
# Score: 2024.0
# 
#
#=======================================

BSNT_01173___      1 ATGTGGGTGTATGAAAAGAAGCTGCAATACCCTGTCAAGGTCAGTACGTG     50
                     ||||||||.||||||||.||||||||.||.||.||.||.||||||||.||
RBAM_007260__      1 ATGTGGGTATATGAAAAAAAGCTGCAGTATCCGGTTAAAGTCAGTACATG     50

BSNT_01173___     51 CAACCCGACGCTGGCGAAGTATTTGATTGAGCAGTATGGCGGAGCGGACG    100
                     ||||||||.||||||.||||.|.|.|||||.||.||.|||||.|||||||
RBAM_007260__     51 CAACCCGATGCTGGCTAAGTTTCTCATTGAACAATACGGCGGGGCGGACG    100

BSNT_01173___    101 GCGAGCTGGCCGCGGCTCTCCGGTATTTGAACCAGCGTTATACGATTCCT    150
                     ||||..|||||||.||.||||||||.||.||||||||.||.|||||||||
RBAM_007260__    101 GCGAATTGGCCGCAGCGCTCCGGTACTTAAACCAGCGCTACACGATTCCT    150

BSNT_01173___    151 GATAAGGTCATCGGCCTTTTAACAGATATCGGCACGGAGGAGTTTGCCCA    200
                     ||.|||||.||||||||..|.||.|||||||||||||||||||||||.||
RBAM_007260__    151 GACAAGGTGATCGGCCTGCTGACGGATATCGGCACGGAGGAGTTTGCGCA    200

BSNT_01173___    201 TTTGGAAATGATTGCGACCATGGTCTATAAGTTAACGAAAGACGCCACAC    250
                     |||.||||||||||||||.|||.|.||||||.|.||.|||||.||.||.|
RBAM_007260__    201 TTTAGAAATGATTGCGACGATGATTTATAAGCTGACAAAAGATGCGACCC    250

BSNT_01173___    251 CGGAGCAGCTGCGTGAAGCTGGGCTTGGCGATCATTACGTCAATCACGAC    300
                     ||||||||||||||||.||.|||||..|.||||||||||||||.||.|||
RBAM_007260__    251 CGGAGCAGCTGCGTGATGCAGGGCTCAGTGATCATTACGTCAACCATGAC    300

BSNT_01173___    301 AGCGCGCTTTTTTATCATAATGCGGCGGGCGCGCCGTTTACCGCGAGC-T    349
                     ||||||||.||||||||.||||||||.||.|..|||||.||.|| |.| |
RBAM_007260__    301 AGCGCGCTGTTTTATCACAATGCGGCCGGAGTTCCGTTCACAGC-ATCTT    349

BSNT_01173___    350 ATATCCAAGCGAAGGGCGATCCGATTGCCGATTTATACGAAGATATTGCC    399
                     |.||.||.||||||||.||||||||.||.||||||||.||.||||||||.
RBAM_007260__    350 ACATACAGGCGAAGGGAGATCCGATCGCTGATTTATATGAGGATATTGCG    399

BSNT_01173___    400 GCAGAAGAAAAGGCGCGGGCGACGTATCAATGGCTGATTGATATTTCGGA    449
                     ||.||||||||||||.|.|||||||||||||||.|.|||||||||||.||
RBAM_007260__    400 GCTGAAGAAAAGGCGAGAGCGACGTATCAATGGATTATTGATATTTCCGA    449

BSNT_01173___    450 TGATCCTGATTTAAACGATTCCCTGCGTTTTTTGCGAGAGCGTGAAATCG    499
                     |||||||||..|.||.|||||.||.||||||.||||.|||||||||||||
RBAM_007260__    450 TGATCCTGACCTGAATGATTCACTCCGTTTTCTGCGTGAGCGTGAAATCG    499

BSNT_01173___    500 TACACTCTATGCGCTTCAGAGAAGCGGTTGAAATTTTAAAAGAAGAACGG    549
                     |.|||||||||||.|||||.|||||||||||.|||||||||||||||||.
RBAM_007260__    500 TCCACTCTATGCGTTTCAGGGAAGCGGTTGAGATTTTAAAAGAAGAACGT    549

BSNT_01173___    550 GATAAAAAGAAGATTTTCTAA    570
                     |||||.|||||.|||||.|||
RBAM_007260__    550 GATAAGAAGAAAATTTTTTAA    570


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