Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01171 and RBAM_007240
See
Amino acid alignment /
Visit
BSNT_01171 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_01171___cotJA.1.9828.seq
# -bsequence dna-align/RBAM_007240___cotJA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01171___cotJA-RBAM_007240___cotJA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01171___cotJA-RBAM_007240___cotJA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01171___cotJA
# 2: RBAM_007240___cotJA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity: 203/249 (81.5%)
# Similarity: 203/249 (81.5%)
# Gaps: 0/249 ( 0.0%)
# Score: 831.0
#
#
#=======================================
BSNT_01171___ 1 ATGAAGGATATGCAGCCGTTTTCGCCTGTCAAATCATATACGCCCTTTCA 50
|||||.||.|..|||||||||.|.||.||||||||.||||..|||||.||
RBAM_007240__ 1 ATGAAAGAAAATCAGCCGTTTACACCGGTCAAATCCTATAAACCCTTCCA 50
BSNT_01171___ 51 CAGCCGTTTTGATCCCTGTCCGCCCATAGGGAAGAAATATTACAGAACGC 100
||||||.|||||||||||.|||||.||.||||..|||||.|.||||||||
RBAM_007240__ 51 CAGCCGGTTTGATCCCTGCCCGCCGATCGGGAGAAAATACTTCAGAACGC 100
BSNT_01171___ 101 CCCCTAACCTTTATATGACCTTTCAGCCTGAGCACATGGAGCAGTTTTCG 150
|.||..|.|||||||||...||||||||..|.|||.|||||||||||||.
RBAM_007240__ 101 CGCCGCATCTTTATATGCGGTTTCAGCCGTATCACTTGGAGCAGTTTTCT 150
BSNT_01171___ 151 CCGATGGAGGCTTTGAGGAAAGGCACCCTTTGGAAGGATCTCTATGATTT 200
|||||||||||.|||||.|||||.|||||||||||||||||.||.|||||
RBAM_007240__ 151 CCGATGGAGGCATTGAGAAAAGGGACCCTTTGGAAGGATCTTTACGATTT 200
BSNT_01171___ 201 TTATGAAAACCCTTATCGAGGGGGAGACGCACATGGCAAAAAAGGTTGA 249
.|||||.||.||||||||.||||||..||.|.|||||.||||||.||||
RBAM_007240__ 201 CTATGATAATCCTTATCGGGGGGGAATCGAATATGGCGAAAAAGATTGA 249
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.