Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01148 and RBAM_007090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence dna-align/BSNT_01148___gatB.1.9828.seq
# -bsequence dna-align/RBAM_007090___gatB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01148___gatB-RBAM_007090___gatB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01148___gatB-RBAM_007090___gatB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01148___gatB
# 2: RBAM_007090___gatB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1432
# Identity: 1257/1432 (87.8%)
# Similarity: 1257/1432 (87.8%)
# Gaps: 2/1432 ( 0.1%)
# Score: 5573.0
#
#
#=======================================
BSNT_01148___ 1 TTGAACTTTGAAACGGTAATCGGACTTGAAGTCCACGTTGAGTTAAAAAC 50
.||||||||||||||||||||||||||||||||||.||.||.||||||||
RBAM_007090__ 1 GTGAACTTTGAAACGGTAATCGGACTTGAAGTCCATGTGGAATTAAAAAC 50
BSNT_01148___ 51 AAAATCAAAAATTTTCTCAAGCTCTCCAACGCCATTCGGCGCGGAGGCGA 100
||||||.|||||||||||||||||.||.|||||||||||||||||.||||
RBAM_007090__ 51 AAAATCTAAAATTTTCTCAAGCTCACCGACGCCATTCGGCGCGGAAGCGA 100
BSNT_01148___ 101 ATACGCAGACAAGCGTTATTGACCTCGGATATCCGGGCGTCCTGCCTGTT 150
||||.||.||.|||||.||.||||||||.|||||.|||||.|||||.|||
RBAM_007090__ 101 ATACCCAAACGAGCGTCATCGACCTCGGCTATCCCGGCGTGCTGCCCGTT 150
BSNT_01148___ 151 CTGAACAAAGAAGCCGTTGAATTCGCAATGAAAGCCGCTATGGCGCTCAA 200
.|||||||||||||.||.||||||||.|||||||||||.|||||..|.||
RBAM_007090__ 151 TTGAACAAAGAAGCGGTCGAATTCGCGATGAAAGCCGCAATGGCTTTGAA 200
BSNT_01148___ 201 CTGTGAGATCGCAACGGATACGAAGTTTGACCGCAAAAACTATTTCTATC 250
|||.||.||||||||||||||||||||||||||.||||||||||||||||
RBAM_007090__ 201 CTGCGAAATCGCAACGGATACGAAGTTTGACCGGAAAAACTATTTCTATC 250
BSNT_01148___ 251 CTGACAACCCGAAAGCGTATCAGATTTCTCAATTTGATAAGCCAATCGGC 300
|.|||||||||||.||.|||||.||||||||||||||.|||||.||||||
RBAM_007090__ 251 CGGACAACCCGAAGGCATATCAAATTTCTCAATTTGACAAGCCGATCGGC 300
BSNT_01148___ 301 GAAAACGGCTGGATCGAAATTGAAGTCGGCGGCAAAACAAAACGCATCGG 350
||||||||||||||||||||.||||||||.||.|||||.|||...|||||
RBAM_007090__ 301 GAAAACGGCTGGATCGAAATCGAAGTCGGTGGAAAAACGAAAAAAATCGG 350
BSNT_01148___ 351 CATCACGCGCCTTCATCTTGAAGAGGATGCCGGAAAACTGACGCATACGG 400
|||.||.||.|||||.||||||||.|||||.|||||||||||||||||||
RBAM_007090__ 351 CATTACCCGTCTTCACCTTGAAGAAGATGCGGGAAAACTGACGCATACGG 400
BSNT_01148___ 401 GCGACGGCTATTCTCTTGTTGACTTCAACCGTCAAGGAACGCCGCTTGTT 450
|||||||||||||.||.||||||||||||||.||.||.|||||||||||.
RBAM_007090__ 401 GCGACGGCTATTCCCTCGTTGACTTCAACCGCCAGGGCACGCCGCTTGTC 450
BSNT_01148___ 451 GAGATCGTATCAGAGCCGGACATCCGCACGCCGGAAGAAGCGTACGCGTA 500
|||||.|||||.||||||||.||||||||.|||||.|||||.|||||.||
RBAM_007090__ 451 GAGATTGTATCTGAGCCGGATATCCGCACACCGGAGGAAGCTTACGCATA 500
BSNT_01148___ 501 TCTTGAAAAGCTGAAATCCATCATCCAGTATACAGGCGTTTCTGACTGTA 550
|||.||||||||||||||.||.||.||.||.|||||.|||||.|||||||
RBAM_007090__ 501 TCTCGAAAAGCTGAAATCAATTATTCAATACACAGGTGTTTCCGACTGTA 550
BSNT_01148___ 551 AAATGGAAGAAGGCTCACTTCGCTGTGACGCCAATATCTCTCTTCGTCCG 600
|||||||||||||.|||||.||||||||||||||.||.||.||.||||||
RBAM_007090__ 551 AAATGGAAGAAGGTTCACTGCGCTGTGACGCCAACATTTCCCTCCGTCCG 600
BSNT_01148___ 601 ATCGGCCAAGAGGAATTTGGCACAAAAACAGAATTGAAAAACTTGAACTC 650
||||||||.|||.||||.|||||||||||.||..||||||||.|||||||
RBAM_007090__ 601 ATCGGCCAGGAGAAATTCGGCACAAAAACGGAGCTGAAAAACCTGAACTC 650
BSNT_01148___ 651 CTTTGCGTTTGTTCAAAAAGGCCTTGAGCATGAAGAAAAACGCCAGGAGC 700
|||.|||||.||.||||||||.||||||||||||||.|||||||||||||
RBAM_007090__ 651 CTTCGCGTTCGTGCAAAAAGGACTTGAGCATGAAGAGAAACGCCAGGAGC 700
BSNT_01148___ 701 AGGTTCTTCTTTCCGGCGGCGTCATCCAGCAAGAAACTCGCCGTTATGAT 750
||||.|||||.||.|||||.|||||.|||||.||.||.||||||||.|||
RBAM_007090__ 701 AGGTGCTTCTGTCAGGCGGAGTCATTCAGCAGGAGACGCGCCGTTACGAT 750
BSNT_01148___ 751 GAAGCAACGAAGAAAACCATTCTTATGCGTGTCAAAGAGGGATCTGACGA 800
|||||.|||||.|||||||||.|.||||||||||||||.||.||.|||||
RBAM_007090__ 751 GAAGCGACGAAAAAAACCATTTTGATGCGTGTCAAAGAAGGTTCGGACGA 800
BSNT_01148___ 801 CTACCGTTACTTCCCAGAGCCGGATCTAGTCGAGCTCTACATTGATGATG 850
|||.||.||.|||||.|||||.||.||.||||||||||||||||||||.|
RBAM_007090__ 801 CTATCGCTATTTCCCTGAGCCTGACCTTGTCGAGCTCTACATTGATGACG 850
BSNT_01148___ 851 AATGGAAGGAACGCGTAAAAGCAAGCATTCCTGAGCTTCCGGATGAGCGC 900
|||||||.||||||||||.|||||.||||||||||||||||||.||||||
RBAM_007090__ 851 AATGGAAAGAACGCGTAAGAGCAACCATTCCTGAGCTTCCGGACGAGCGC 900
BSNT_01148___ 901 CGCAAGCGTTATATCGAAGAGCTTGGCTTGCCTGCATATGACGCGATGGT 950
|||||||||||||||||||||||.|||.|||||||.||||||||.|||||
RBAM_007090__ 901 CGCAAGCGTTATATCGAAGAGCTCGGCCTGCCTGCTTATGACGCAATGGT 950
BSNT_01148___ 951 TCTGACGCTGACAAAAGAAATGGCTGATTTCTTCGAAGAAACCGTTCAA- 999
||||||||||||.|||||||||||||||||||||||||||| ||.||||
RBAM_007090__ 951 TCTGACGCTGACGAAAGAAATGGCTGATTTCTTCGAAGAAA-CGGTCAAT 999
BSNT_01148___ 1000 AAAGGCGCTGAAGCCAAACAAGCGTCTAACTGGCTGATGGGTGAAGTGTC 1049
||||||||.||||||||.||.||.||.||||||||||||||||||||.||
RBAM_007090__ 1000 AAAGGCGCAGAAGCCAAGCAGGCATCAAACTGGCTGATGGGTGAAGTCTC 1049
BSNT_01148___ 1050 AGCTTACCTAAACGCTGAGCAAAAAGAGCTTGCCGATGTTGCCCTGACAC 1099
|||||||||.|||||.||.|||||||||||||..|||||.||.|||||.|
RBAM_007090__ 1050 AGCTTACCTGAACGCCGAACAAAAAGAGCTTGAGGATGTCGCACTGACTC 1099
BSNT_01148___ 1100 CTGAAGGCCTTGCCGGCATGATCAAATTGATTGAAAAAGGAACCATTTCT 1149
||||||||||||||||||||||.||..|||||||||||||||||||.||.
RBAM_007090__ 1100 CTGAAGGCCTTGCCGGCATGATTAAGCTGATTGAAAAAGGAACCATCTCG 1149
BSNT_01148___ 1150 TCTAAGATCGCGAAGAAAGTGTTTAAAGAATTGATTGAAAAAGGCGGCGA 1199
||.||.||||||||||||||.|||||||||||.|||||||||||||||||
RBAM_007090__ 1150 TCCAAAATCGCGAAGAAAGTCTTTAAAGAATTAATTGAAAAAGGCGGCGA 1199
BSNT_01148___ 1200 CGCTGAGAAGATTGTGAAAGAGAAAGGCCTTGTTCAGATTTCTGACGAAG 1249
|||.||.||.||.||.|||||.||||||||.||.|||||||||||||||.
RBAM_007090__ 1200 CGCAGAAAAAATCGTCAAAGAAAAAGGCCTCGTGCAGATTTCTGACGAAA 1249
BSNT_01148___ 1250 GCGTGCTTCTGAAGCTTGTCACTGAGGCGCTTGACAACAATCCTCAATCA 1299
||||||||||||||||.||.||.||.||||||||||.|||.||.||.|||
RBAM_007090__ 1250 GCGTGCTTCTGAAGCTGGTAACAGATGCGCTTGACAGCAACCCGCAGTCA 1299
BSNT_01148___ 1300 ATCGAAGACTTTAAAAACGGAAAAGACCGCGCGATCGGCTTCCTAGTCGG 1349
||.||||||||.||||||||||||||||||||||||||||||||.|||||
RBAM_007090__ 1300 ATTGAAGACTTCAAAAACGGAAAAGACCGCGCGATCGGCTTCCTTGTCGG 1349
BSNT_01148___ 1350 ACAGATTATGAAAGCGTCCAAAGGACAAGCCAACCCGCCGATGGTCAACA 1399
.||||||||||||||.||.||||||||.||||||||||||||||||||||
RBAM_007090__ 1350 GCAGATTATGAAAGCCTCAAAAGGACAGGCCAACCCGCCGATGGTCAACA 1399
BSNT_01148___ 1400 AAATTCTGCTTGAAGAAATTAAAAAACGCTAA 1431
|.||..|.|||||||||||.||||||||.|||
RBAM_007090__ 1400 AGATCTTACTTGAAGAAATCAAAAAACGATAA 1431
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