Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01141 and RBAM_007050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence dna-align/BSNT_01141___sapB.1.9828.seq
# -bsequence dna-align/RBAM_007050___sapB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01141___sapB-RBAM_007050___sapB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01141___sapB-RBAM_007050___sapB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01141___sapB
# 2: RBAM_007050___sapB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 702
# Identity: 581/702 (82.8%)
# Similarity: 581/702 (82.8%)
# Gaps: 18/702 ( 2.6%)
# Score: 2455.5
#
#
#=======================================
BSNT_01141___ 1 TTGAGCTGGTATATTGATCCTGATATTTTATTGAAATTGGGCATTGCCAC 50
|||||||||..|||.||.||.||.||||||||.||..|||||||||||||
RBAM_007050__ 1 TTGAGCTGGCCTATCGAACCAGAGATTTTATTAAAGCTGGGCATTGCCAC 50
BSNT_01141___ 51 ATTGATTGGCATGGTCATCGGGCTTGAACGCGAATTAAAAAATAAGCCGC 100
..||||.||||||.|||||||.|||||||||||..|.|||||.||.||||
RBAM_007050__ 51 GCTGATCGGCATGATCATCGGTCTTGAACGCGAGCTGAAAAACAAACCGC 100
BSNT_01141___ 101 TCGGATTAAAAACCTGTATTGTCATTGCAGTCAGCTCATGCATGCTGACG 150
|||||.|.|||||||||||.|||||.||.||||||||.||.|||||||||
RBAM_007050__ 101 TCGGACTGAAAACCTGTATCGTCATCGCCGTCAGCTCCTGTATGCTGACG 150
BSNT_01141___ 151 ATCGTCAGTATTAATGCGGCATATCATTTCCCTAAATACTACCGCATCAT 200
||||||||.|||||||||||||||||||||||.|||||.|||||.|||||
RBAM_007050__ 151 ATCGTCAGCATTAATGCGGCATATCATTTCCCGAAATATTACCGAATCAT 200
BSNT_01141___ 201 GATGGATCCGCTTCGTCTGCCGGCACAAATCATCTCCGGCGTCGGGTTTA 250
||||||||||||.||.||.||.||.||||||||.|||||||||||.||||
RBAM_007050__ 201 GATGGATCCGCTCCGCCTTCCCGCCCAAATCATTTCCGGCGTCGGTTTTA 250
BSNT_01141___ 251 TCGGAGCCGGTGTCATCCTGCGAAAAAGCAATGATGTCATTTCCGGCCTG 300
||||.||.||.||.||||||||.|||||||||||.|||||.|||||||||
RBAM_007050__ 251 TCGGCGCGGGCGTGATCCTGCGTAAAAGCAATGACGTCATATCCGGCCTG 300
BSNT_01141___ 301 ACGACATCGGCCATGATCTGGGGGGCAGCGGGGCTCGGGCTTGCTACGGG 350
||||||||||||||.||||||||.|||||.||||||||.||.|||||.||
RBAM_007050__ 301 ACGACATCGGCCATCATCTGGGGCGCAGCCGGGCTCGGTCTGGCTACAGG 350
BSNT_01141___ 351 AGCCGGTTTTTATAAAGAAGCGTTTGCCAGTCTTCTGTTCATCCTGATCA 400
.|||||.|||||||||||.|||||.||.|||||..||||.||||||||||
RBAM_007050__ 351 CGCCGGCTTTTATAAAGAGGCGTTCGCAAGTCTCTTGTTTATCCTGATCA 400
BSNT_01141___ 401 GCGTGGAATTTCTCCCATGGGTGGTCAGAAAAATCGGCCCCGACCGCCTG 450
|.||.||||||||.||.|||.||.|||||||||||||.|||.|||||.||
RBAM_007050__ 401 GTGTCGAATTTCTTCCGTGGCTGATCAGAAAAATCGGTCCCAACCGCTTG 450
BSNT_01141___ 451 CAGGAAAAAGACATCCGCATCAGAATGTCGCTTTCTGATAAAGACAAAAT 500
.|||||||.||.||||||.|.||||||||.|||||.||||||||||||||
RBAM_007050__ 451 AAGGAAAAGGATATCCGCGTGAGAATGTCTCTTTCCGATAAAGACAAAAT 500
BSNT_01141___ 501 GACAGAGATTTTAAAAGAAATGAAAAGAAGAGATATCAAA-------GCA 543
|||.||||||.|||||||||||||||| |||| |||
RBAM_007050__ 501 GACCGAGATTCTAAAAGAAATGAAAAG---------CAAACGGCTCCGCA 541
BSNT_01141___ 544 --CACTCCGTTCGGATCGACGACCTGGGCGAAAAGGATTTTCCAATTATG 591
||||||||.|||||.||.||.|||.|||||||.||.|||||.||||||
RBAM_007050__ 542 TTCACTCCGTCCGGATTGATGATCTGCGCGAAAAAGAATTTCCGATTATG 591
BSNT_01141___ 592 GAAGTGAAGGTCCGCGTCCATAAAAACAGATACACGACCGATGTCTACTA 641
||||||||.|||.|.||.||.||||||.|.|||||.||.||.|||||.||
RBAM_007050__ 592 GAAGTGAAAGTCAGTGTTCACAAAAACCGCTACACCACTGACGTCTATTA 641
BSNT_01141___ 642 TGACATTAAAGCCATTGAAGGCGTAGTCGGCGTGAAGTGTGATACATTAT 691
|||.|||||||..|||.||||.||.|||||.||||||||||||||.||||
RBAM_007050__ 642 TGATATTAAAGAAATTCAAGGTGTCGTCGGAGTGAAGTGTGATACGTTAT 691
BSNT_01141___ 692 AA 693
||
RBAM_007050__ 692 AA 693
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